BLASTX nr result

ID: Coptis23_contig00031279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031279
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI14936.3| unnamed protein product [Vitis vinifera]              276   3e-72
ref|XP_002511307.1| conserved hypothetical protein [Ricinus comm...   265   4e-69
ref|XP_002321637.1| predicted protein [Populus trichocarpa] gi|2...   249   3e-64
ref|XP_002277186.2| PREDICTED: uncharacterized protein LOC100248...   240   1e-61
ref|NP_001045149.2| Os01g0909300 [Oryza sativa Japonica Group] g...   194   2e-47

>emb|CBI14936.3| unnamed protein product [Vitis vinifera]
          Length = 439

 Score =  276 bits (705), Expect = 3e-72
 Identities = 138/202 (68%), Positives = 166/202 (82%), Gaps = 2/202 (0%)
 Frame = +3

Query: 51  DGVRDLNAFLKEQRLKLARISSGEIKAKAKIILXXXXXXXXXMVAAICYAWLLDSRIRET 230
           D  R++N FLKEQR K+ +I +GEI AKAKI+L         MVAAICYAWLL++R+R++
Sbjct: 150 DEARNINEFLKEQRTKIGKIVNGEISAKAKILLSGPSNSTSSMVAAICYAWLLENRMRDS 209

Query: 231 EKEGDG--ALVVPVMNMRRGRMWKQRQVAWLLHLVGIDATSLLFSDEVDLENLMMVGQLS 404
           +KE D    +VVPVMN+RRG MWK  + AWL H +GIDATSLLFSDEVDLENLMM  QLS
Sbjct: 210 KKEDDEEECVVVPVMNVRRGNMWKLLRAAWLFHHIGIDATSLLFSDEVDLENLMMAKQLS 269

Query: 405 MMVVGQEILKTNNEVGSPCTLLTDNYCEDAYDLLQIPVVKKLLLAGILLDTNNLSSSTKF 584
           ++VVGQ++L+TN EVGS CT+LTDNYCEDAYDLLQIPV+K LLLAGILLDT NL++S K 
Sbjct: 270 ILVVGQDVLRTNGEVGSQCTILTDNYCEDAYDLLQIPVLKNLLLAGILLDTRNLNASAKL 329

Query: 585 SMNRDSEAVQLLIVGSAPNYRN 650
           SM RD+EAVQLL+VGSAPN+RN
Sbjct: 330 SMARDAEAVQLLLVGSAPNHRN 351


>ref|XP_002511307.1| conserved hypothetical protein [Ricinus communis]
           gi|223550422|gb|EEF51909.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 648

 Score =  265 bits (678), Expect = 4e-69
 Identities = 133/197 (67%), Positives = 164/197 (83%), Gaps = 2/197 (1%)
 Frame = +3

Query: 66  LNAFLKEQRLKLARISSGEIKAKAKIILXXXXXXXXXMVAAICYAWLLDSRIRETEKE-- 239
           LN FLKEQR K+ +I +GEI +KAK+IL         MVAAICYAWLL++R  + + E  
Sbjct: 334 LNGFLKEQRTKIEKILNGEIGSKAKVILSGPTNSTSSMVAAICYAWLLENRFMKIKGEDN 393

Query: 240 GDGALVVPVMNMRRGRMWKQRQVAWLLHLVGIDATSLLFSDEVDLENLMMVGQLSMMVVG 419
           G+G +VVPVMN+RRGRMWKQRQ AWL   VG+DATSLLF+DEVDLE+L+M GQL+++VVG
Sbjct: 394 GEGYVVVPVMNVRRGRMWKQRQAAWLFQYVGLDATSLLFADEVDLESLIMAGQLTILVVG 453

Query: 420 QEILKTNNEVGSPCTLLTDNYCEDAYDLLQIPVVKKLLLAGILLDTNNLSSSTKFSMNRD 599
           Q+ILKT++E  S CT+LTDNYCEDAYDLL IP+++KLLLAGILLDT NL++STK SM RD
Sbjct: 454 QDILKTDSEDRSQCTILTDNYCEDAYDLLHIPMLRKLLLAGILLDTQNLNASTKSSMTRD 513

Query: 600 SEAVQLLIVGSAPNYRN 650
           +EAVQLL+VGSAP+YRN
Sbjct: 514 AEAVQLLLVGSAPDYRN 530


>ref|XP_002321637.1| predicted protein [Populus trichocarpa] gi|222868633|gb|EEF05764.1|
           predicted protein [Populus trichocarpa]
          Length = 657

 Score =  249 bits (636), Expect = 3e-64
 Identities = 130/208 (62%), Positives = 158/208 (75%), Gaps = 2/208 (0%)
 Frame = +3

Query: 36  KENNVDGVRDLNAFLKEQRLKLARISSGEIKAKAKIILXXXXXXXXXMVAAICYAWLLDS 215
           KE   +    LN FL E++ K+ +I + E+ +KAKIIL         MVAAICYA LL +
Sbjct: 331 KEEEGEEDFSLNGFLIEEKTKIEKILNRELDSKAKIILSGPSNSTSSMVAAICYALLLAN 390

Query: 216 RIRETEKEGD--GALVVPVMNMRRGRMWKQRQVAWLLHLVGIDATSLLFSDEVDLENLMM 389
           R+ + +   D  G +V PVMN RRGRMWKQRQ AWL   VG+DATSLLF+DEVDLE+LMM
Sbjct: 391 RMTKNKGNSDREGTVVFPVMNTRRGRMWKQRQAAWLFQHVGLDATSLLFADEVDLESLMM 450

Query: 390 VGQLSMMVVGQEILKTNNEVGSPCTLLTDNYCEDAYDLLQIPVVKKLLLAGILLDTNNLS 569
            G+L+++VVGQ+IL+TN EVGS CT+LTDNYCEDAYDLLQ PV+KKLLLAGILLDT NL+
Sbjct: 451 EGKLNILVVGQDILRTNGEVGSQCTILTDNYCEDAYDLLQTPVLKKLLLAGILLDTQNLN 510

Query: 570 SSTKFSMNRDSEAVQLLIVGSAPNYRNA 653
           +S   SM RD+EAVQLL+VGS P YRNA
Sbjct: 511 ASATCSMTRDAEAVQLLLVGSTPKYRNA 538


>ref|XP_002277186.2| PREDICTED: uncharacterized protein LOC100248384 [Vitis vinifera]
          Length = 279

 Score =  240 bits (613), Expect = 1e-61
 Identities = 118/160 (73%), Positives = 140/160 (87%), Gaps = 2/160 (1%)
 Frame = +3

Query: 177 MVAAICYAWLLDSRIRETEKEGDG--ALVVPVMNMRRGRMWKQRQVAWLLHLVGIDATSL 350
           MVAAICYAWLL++R+R+++KE D    +VVPVMN+RRG MWK  + AWL H +GIDATSL
Sbjct: 1   MVAAICYAWLLENRMRDSKKEDDEEECVVVPVMNVRRGNMWKLLRAAWLFHHIGIDATSL 60

Query: 351 LFSDEVDLENLMMVGQLSMMVVGQEILKTNNEVGSPCTLLTDNYCEDAYDLLQIPVVKKL 530
           LFSDEVDLENLMM  QLS++VVGQ++L+TN EVGS CT+LTDNYCEDAYDLLQIPV+K L
Sbjct: 61  LFSDEVDLENLMMAKQLSILVVGQDVLRTNGEVGSQCTILTDNYCEDAYDLLQIPVLKNL 120

Query: 531 LLAGILLDTNNLSSSTKFSMNRDSEAVQLLIVGSAPNYRN 650
           LLAGILLDT NL++S K SM RD+EAVQLL+VGSAPN+RN
Sbjct: 121 LLAGILLDTRNLNASAKLSMARDAEAVQLLLVGSAPNHRN 160


>ref|NP_001045149.2| Os01g0909300 [Oryza sativa Japonica Group]
           gi|255673982|dbj|BAF07063.2| Os01g0909300 [Oryza sativa
           Japonica Group]
          Length = 518

 Score =  194 bits (492), Expect = 2e-47
 Identities = 106/193 (54%), Positives = 135/193 (69%), Gaps = 2/193 (1%)
 Frame = +3

Query: 51  DGVRDLNAFLKEQRLKLARISSG--EIKAKAKIILXXXXXXXXXMVAAICYAWLLDSRIR 224
           DGV  LN+FL+ QR  +A + SG        KI+L         + AAICYAW+L S+  
Sbjct: 232 DGVARLNSFLRRQRAAVAELGSGGRPSSRSTKIVLSDASKSVSSIAAAICYAWMLASK-- 289

Query: 225 ETEKEGDGALVVPVMNMRRGRMWKQRQVAWLLHLVGIDATSLLFSDEVDLENLMMVGQLS 404
                 D    VPV+NMRRGRM + RQ AWLLH VG+DA++LLF+DEVD+E LMM  ++S
Sbjct: 290 -----EDAEAAVPVVNMRRGRMERCRQAAWLLHHVGVDASALLFADEVDMEGLMMDKRVS 344

Query: 405 MMVVGQEILKTNNEVGSPCTLLTDNYCEDAYDLLQIPVVKKLLLAGILLDTNNLSSSTKF 584
           ++VVGQ++LK N+++GS CT+LT+NYCEDAY LLQ   +KKLLLAGILLDT NLS+    
Sbjct: 345 LVVVGQDVLKPNDKMGSVCTILTNNYCEDAYSLLQSLDIKKLLLAGILLDTKNLSN---M 401

Query: 585 SMNRDSEAVQLLI 623
             NRDSEAVQLL+
Sbjct: 402 CSNRDSEAVQLLL 414


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