BLASTX nr result

ID: Coptis23_contig00031273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031273
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271346.1| PREDICTED: uncharacterized protein LOC100258...   256   2e-66
ref|XP_003601424.1| hypothetical protein MTR_3g080550 [Medicago ...   242   2e-62
ref|XP_002879321.1| EMB1381 [Arabidopsis lyrata subsp. lyrata] g...   234   7e-60
ref|XP_003556841.1| PREDICTED: uncharacterized protein LOC100817...   232   3e-59
ref|NP_180692.3| embryo defective 1381 protein [Arabidopsis thal...   230   1e-58

>ref|XP_002271346.1| PREDICTED: uncharacterized protein LOC100258570 [Vitis vinifera]
           gi|297739214|emb|CBI28865.3| unnamed protein product
           [Vitis vinifera]
          Length = 565

 Score =  256 bits (653), Expect = 2e-66
 Identities = 121/158 (76%), Positives = 139/158 (87%)
 Frame = -2

Query: 475 STFEDIVDAYLAYLQVTVVNPAMDSVLFLMQKFAVDACDGKISKDRLQFGAPWRHPPRTD 296
           STFEDI+DAYL+YLQ+TVVNPAMD  L L++KFAVDA  G+I +DRL+FGAPWRHPPR D
Sbjct: 392 STFEDIIDAYLSYLQITVVNPAMDKALKLLEKFAVDARSGRIPEDRLRFGAPWRHPPRID 451

Query: 295 NPTVRLEWTKIQLMDFVRSLVNAEFGLNYFSDYSLEILDDPSATAMLEVGLLYTQRDPPY 116
           NPT+  EWTK+QL+DFV+SLVNAEFG NY +D SLEILDDPSA A++EVGLLY QRDP +
Sbjct: 452 NPTLCSEWTKLQLIDFVQSLVNAEFGFNYLADCSLEILDDPSAVALVEVGLLYAQRDPSF 511

Query: 115 IRPISRGIERCLVRWLVQERMQMSFLQSFRYMWQRIIR 2
           IRPIS GI+RCLVRWLVQERMQMSF QSF Y+W RIIR
Sbjct: 512 IRPISLGIQRCLVRWLVQERMQMSFQQSFWYLWHRIIR 549


>ref|XP_003601424.1| hypothetical protein MTR_3g080550 [Medicago truncatula]
           gi|355490472|gb|AES71675.1| hypothetical protein
           MTR_3g080550 [Medicago truncatula]
          Length = 554

 Score =  242 bits (618), Expect = 2e-62
 Identities = 110/158 (69%), Positives = 135/158 (85%)
 Frame = -2

Query: 475 STFEDIVDAYLAYLQVTVVNPAMDSVLFLMQKFAVDACDGKISKDRLQFGAPWRHPPRTD 296
           STFEDIVDAYLAYLQ++VVNPAMD    ++QKFA+D  +GK+S D+L+FGAPWRHPP+ D
Sbjct: 382 STFEDIVDAYLAYLQISVVNPAMDRASEILQKFAIDVRNGKVSDDKLRFGAPWRHPPKVD 441

Query: 295 NPTVRLEWTKIQLMDFVRSLVNAEFGLNYFSDYSLEILDDPSATAMLEVGLLYTQRDPPY 116
           +P + +EW K+QLMDFV+SL+NAEFG+NY  DYS EI DDPSA A+L+VGLLY QRDPP+
Sbjct: 442 DPKLCIEWAKLQLMDFVKSLINAEFGVNYRIDYSEEIFDDPSALALLQVGLLYAQRDPPF 501

Query: 115 IRPISRGIERCLVRWLVQERMQMSFLQSFRYMWQRIIR 2
            RPISRGI+RCLVRWLVQ+RM++SF Q  R+ W RIIR
Sbjct: 502 FRPISRGIQRCLVRWLVQQRMELSFPQLIRFQWHRIIR 539


>ref|XP_002879321.1| EMB1381 [Arabidopsis lyrata subsp. lyrata]
           gi|297325160|gb|EFH55580.1| EMB1381 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 559

 Score =  234 bits (596), Expect = 7e-60
 Identities = 107/157 (68%), Positives = 129/157 (82%)
 Frame = -2

Query: 472 TFEDIVDAYLAYLQVTVVNPAMDSVLFLMQKFAVDACDGKISKDRLQFGAPWRHPPRTDN 293
           TFEDIVDAYLAYLQV VVNPAMD  L  +Q++A D   G I  ++L FGAPWRHPP+T++
Sbjct: 390 TFEDIVDAYLAYLQVAVVNPAMDKALLRLQRYATDVRKGSIPYEKLHFGAPWRHPPQTED 449

Query: 292 PTVRLEWTKIQLMDFVRSLVNAEFGLNYFSDYSLEILDDPSATAMLEVGLLYTQRDPPYI 113
           PT+  EW KIQLMDFV++LVN EF +NY  DYSLEI +DPSA A++EVG+LYTQRDP + 
Sbjct: 450 PTLNSEWAKIQLMDFVQALVNTEFAVNYLGDYSLEIFEDPSAMALVEVGILYTQRDPSFF 509

Query: 112 RPISRGIERCLVRWLVQERMQMSFLQSFRYMWQRIIR 2
           RPIS+GI+RCLVRWL+QERMQMS+  S +Y WQRIIR
Sbjct: 510 RPISQGIKRCLVRWLIQERMQMSYWSSTKYWWQRIIR 546


>ref|XP_003556841.1| PREDICTED: uncharacterized protein LOC100817889 [Glycine max]
          Length = 603

 Score =  232 bits (591), Expect = 3e-59
 Identities = 104/158 (65%), Positives = 132/158 (83%)
 Frame = -2

Query: 475 STFEDIVDAYLAYLQVTVVNPAMDSVLFLMQKFAVDACDGKISKDRLQFGAPWRHPPRTD 296
           STF DIVDAY+AYLQ+TVVNPA+D  L ++QKFAVD  +GK+S+DRL+FGAPWRHPP+ D
Sbjct: 384 STFVDIVDAYIAYLQITVVNPALDEALEILQKFAVDVYNGKVSEDRLRFGAPWRHPPQID 443

Query: 295 NPTVRLEWTKIQLMDFVRSLVNAEFGLNYFSDYSLEILDDPSATAMLEVGLLYTQRDPPY 116
           +P +R+EW K+QLMDFV+SL N EFG+NY  DYS EI DDPS  A+L+VGLLY QRDPP+
Sbjct: 444 DPKLRMEWAKLQLMDFVQSLANTEFGVNYRIDYSEEIFDDPSTFALLQVGLLYAQRDPPF 503

Query: 115 IRPISRGIERCLVRWLVQERMQMSFLQSFRYMWQRIIR 2
           +RPIS+GI+RCLVRWL Q+ MQ++F     ++W R+IR
Sbjct: 504 LRPISKGIQRCLVRWLAQQWMQLNFHNWIHFVWHRMIR 541


>ref|NP_180692.3| embryo defective 1381 protein [Arabidopsis thaliana]
           gi|330253435|gb|AEC08529.1| embryo defective 1381
           protein [Arabidopsis thaliana]
          Length = 559

 Score =  230 bits (586), Expect = 1e-58
 Identities = 106/157 (67%), Positives = 128/157 (81%)
 Frame = -2

Query: 472 TFEDIVDAYLAYLQVTVVNPAMDSVLFLMQKFAVDACDGKISKDRLQFGAPWRHPPRTDN 293
           TFEDIVDAYLAYLQV VVNPAMD  L  +Q++A D   G I  ++L+FGA WRHPP+T++
Sbjct: 390 TFEDIVDAYLAYLQVAVVNPAMDKALLRLQRYATDVRKGSIPYEKLRFGASWRHPPQTED 449

Query: 292 PTVRLEWTKIQLMDFVRSLVNAEFGLNYFSDYSLEILDDPSATAMLEVGLLYTQRDPPYI 113
           PT   EW KIQLMDFV++LVN EF +NY  DYSLEI +DPSA A++EVG+LYTQRDP + 
Sbjct: 450 PTQNSEWAKIQLMDFVQALVNTEFAVNYLGDYSLEIFEDPSAMALVEVGILYTQRDPSFF 509

Query: 112 RPISRGIERCLVRWLVQERMQMSFLQSFRYMWQRIIR 2
           RPIS+GI+RCLVRWL+QERMQMS+  S +Y WQRIIR
Sbjct: 510 RPISQGIKRCLVRWLIQERMQMSYWSSTKYWWQRIIR 546


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