BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031272
         (928 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29897.3| unnamed protein product [Vitis vinifera]              242   1e-82
ref|XP_002275450.1| PREDICTED: UDP-N-acetylmuramoylalanine--D-gl...   167   7e-51
ref|XP_001772045.1| predicted protein [Physcomitrella patens sub...   184   2e-44
ref|XP_002960083.1| hypothetical protein SELMODRAFT_229823 [Sela...   182   1e-43
ref|XP_002984052.1| hypothetical protein SELMODRAFT_119124 [Sela...   182   1e-43

>emb|CBI29897.3| unnamed protein product [Vitis vinifera]
          Length = 479

 Score =  242 bits (618), Expect(2) = 1e-82
 Identities = 122/172 (70%), Positives = 148/172 (86%)
 Frame = +3

Query: 213 RSAAKLALTRGASVIAVDKNENLIPLEHDSTFEKHGYLKTILGHCEREALENADRVVVSP 392
           R+A KLAL RGASVIA+D+NENL  LE +  FEKHG+LKT+LGH + + L++AD VVVSP
Sbjct: 24  RAATKLALARGASVIAIDQNENLSLLELNPLFEKHGHLKTVLGHFDTKLLKDADMVVVSP 83

Query: 393 GVPIQNYGLSSLLQSGRRVMSELDFAAEVLPKSMKILAVTGTNGKSTVTTFAGQILRQLG 572
           GVP++++GLS LLQSG+RV+SELDFAAE+LP+S+KILAVTGTNGKSTV TF+GQ+L  LG
Sbjct: 84  GVPLESHGLSFLLQSGKRVLSELDFAAEILPRSIKILAVTGTNGKSTVATFSGQMLSHLG 143

Query: 573 VEAFVGGNLGKPLSEAAIQCLTPPPLNRKFEVAVVEVSSYQMEMPNKYFYPS 728
           +E FVGGNLG PLSEAAIQCLT P     F+VAVVEVSSYQ+E+PNK+F PS
Sbjct: 144 IEVFVGGNLGIPLSEAAIQCLTCPSPKPVFQVAVVEVSSYQLEVPNKHFCPS 195



 Score = 91.3 bits (225), Expect(2) = 1e-82
 Identities = 43/64 (67%), Positives = 50/64 (78%)
 Frame = +1

Query: 736 VAVVLNLTPDHLERHETMTNYAAAKCRVFSHMNYSKLAILPIGNQHLNEAFKDYVDTCNV 915
           VAVVLNLT DHLERH+TM NYA  KCR+ SHM  SKL ILP GN+ LNEA ++ V+  N+
Sbjct: 196 VAVVLNLTSDHLERHKTMKNYAITKCRLLSHMTNSKLGILPFGNKLLNEAMEELVNEVNL 255

Query: 916 AWIG 927
           AWIG
Sbjct: 256 AWIG 259


>ref|XP_002275450.1| PREDICTED: UDP-N-acetylmuramoylalanine--D-glutamate ligase-like
           [Vitis vinifera]
          Length = 307

 Score =  167 bits (424), Expect(2) = 7e-51
 Identities = 82/117 (70%), Positives = 101/117 (86%)
 Frame = +3

Query: 378 VVVSPGVPIQNYGLSSLLQSGRRVMSELDFAAEVLPKSMKILAVTGTNGKSTVTTFAGQI 557
           VVVSPGVP++++GLS LLQSG+R++S+LDFAAE+LP+S+KILA TGTNGKST+ TF+GQ+
Sbjct: 2   VVVSPGVPLESHGLSFLLQSGKRILSKLDFAAEILPRSIKILAATGTNGKSTIATFSGQM 61

Query: 558 LRQLGVEAFVGGNLGKPLSEAAIQCLTPPPLNRKFEVAVVEVSSYQMEMPNKYFYPS 728
           L  LG+E  V GNLG PLSEAAIQCLT P     F+VAVVEVSSYQ+E+PNK+F PS
Sbjct: 62  LSHLGIEVIVEGNLGIPLSEAAIQCLTCPSPKPVFQVAVVEVSSYQLEVPNKHFCPS 118



 Score = 60.1 bits (144), Expect(2) = 7e-51
 Identities = 28/41 (68%), Positives = 32/41 (78%)
 Frame = +1

Query: 736 VAVVLNLTPDHLERHETMTNYAAAKCRVFSHMNYSKLAILP 858
           V V L+LT DHLERH+TM NYA  KCR+ SHM+ SKL ILP
Sbjct: 119 VVVGLDLTSDHLERHKTMKNYAITKCRLLSHMSNSKLGILP 159


>ref|XP_001772045.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|76880192|dbj|BAE45867.1|
           UDP-N-acetylmuramoylalanine-D-glutamate ligase
           [Physcomitrella patens] gi|162676646|gb|EDQ63126.1|
           predicted protein [Physcomitrella patens subsp. patens]
          Length = 521

 Score =  184 bits (468), Expect = 2e-44
 Identities = 101/212 (47%), Positives = 135/212 (63%), Gaps = 2/212 (0%)
 Frame = +3

Query: 156 SKQDLKGQTXXXXXXXXXXRSAAKLALTRGASVIAVDKNENLIPLEHDSTFEKHGY--LK 329
           S+QDL G+T          RS  KLAL+RGA+V+A+D N + +PLE DS FE +    ++
Sbjct: 45  SRQDLNGETVAVIGLGVSGRSVVKLALSRGANVLALDSNPSCVPLEEDSGFEGYDLNRVQ 104

Query: 330 TILGHCEREALENADRVVVSPGVPIQNYGLSSLLQSGRRVMSELDFAAEVLPKSMKILAV 509
           T LG  +RE L  A ++V+SPGVP+ +  +++ +Q+G    SEL FAA  LP ++K+ AV
Sbjct: 105 TELGPHKRETLLKASQLVLSPGVPVTHPDIAAAIQAGVPAFSELGFAAAALPGNIKVAAV 164

Query: 510 TGTNGKSTVTTFAGQILRQLGVEAFVGGNLGKPLSEAAIQCLTPPPLNRKFEVAVVEVSS 689
           TGTNGKSTVTTF  QILR  GV  FVGGNLG PLS+  +QCL  P  +  F VAVVEVSS
Sbjct: 165 TGTNGKSTVTTFTSQILRNAGVRTFVGGNLGTPLSDGVLQCLAFPAEDPPFSVAVVEVSS 224

Query: 690 YQMEMPNKYFYPSCSGCCGFEPHSRSSRKARD 785
           YQ+E+P   F+P  +      P      K+ +
Sbjct: 225 YQLELPGS-FHPKAAVILNLTPDHLERHKSME 255



 Score = 60.5 bits (145), Expect = 6e-07
 Identities = 30/65 (46%), Positives = 39/65 (60%)
 Frame = +1

Query: 733 QVAVVLNLTPDHLERHETMTNYAAAKCRVFSHMNYSKLAILPIGNQHLNEAFKDYVDTCN 912
           + AV+LNLTPDHLERH++M  Y + KCRVFS M  S +AI+P  +  L            
Sbjct: 236 KAAVILNLTPDHLERHKSMEAYGSIKCRVFSRMEASDVAIIPQSDVLLRRLAAMSGSQAT 295

Query: 913 VAWIG 927
            AW+G
Sbjct: 296 RAWMG 300


>ref|XP_002960083.1| hypothetical protein SELMODRAFT_229823 [Selaginella moellendorffii]
           gi|300171022|gb|EFJ37622.1| hypothetical protein
           SELMODRAFT_229823 [Selaginella moellendorffii]
          Length = 492

 Score =  182 bits (461), Expect = 1e-43
 Identities = 105/216 (48%), Positives = 133/216 (61%), Gaps = 4/216 (1%)
 Frame = +3

Query: 153 SSKQDLKGQTXXXXXXXXXXRSAAKLALTRGASVIAVDKNENLIPLEHDSTFEKHGY--- 323
           S++ DL G+           R+A +LAL RGASVIAVDKN+ L PL+ D  F  HGY   
Sbjct: 12  SARLDLSGKRVVVVGLGSSGRAAIRLALLRGASVIAVDKNDKLAPLKEDPAF--HGYEMD 69

Query: 324 -LKTILGHCEREALENADRVVVSPGVPIQNYGLSSLLQSGRRVMSELDFAAEVLPKSMKI 500
            + T LG  + E   +A R+VVSPGVP+    L+  + SG   +SEL FAAE  PK++KI
Sbjct: 70  RVSTELGPHQLETFLSASRIVVSPGVPLSEPILAYAMDSGIPTISELGFAAEAFPKAVKI 129

Query: 501 LAVTGTNGKSTVTTFAGQILRQLGVEAFVGGNLGKPLSEAAIQCLTPPPLNRKFEVAVVE 680
            AVTGTNGKSTVTTF GQIL+Q GV  FVGGNLG P S+AA +C   P  +  ++ AV+E
Sbjct: 130 AAVTGTNGKSTVTTFTGQILQQAGVRTFVGGNLGTPFSDAACECFKFPSDDPPYQAAVLE 189

Query: 681 VSSYQMEMPNKYFYPSCSGCCGFEPHSRSSRKARDN 788
           VSSYQ+E+P   F PS        P      K+ +N
Sbjct: 190 VSSYQLELPGS-FSPSVGVILNLSPDHLERHKSMEN 224



 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 30/64 (46%), Positives = 42/64 (65%)
 Frame = +1

Query: 736 VAVVLNLTPDHLERHETMTNYAAAKCRVFSHMNYSKLAILPIGNQHLNEAFKDYVDTCNV 915
           V V+LNL+PDHLERH++M NY   KCR+F  M+ SKL+I+P  ++ L +    Y      
Sbjct: 205 VGVILNLSPDHLERHKSMENYGETKCRLFERMDSSKLSIIPHADEFLRKVAYKYNSGSTK 264

Query: 916 AWIG 927
           AW+G
Sbjct: 265 AWLG 268


>ref|XP_002984052.1| hypothetical protein SELMODRAFT_119124 [Selaginella moellendorffii]
           gi|300148404|gb|EFJ15064.1| hypothetical protein
           SELMODRAFT_119124 [Selaginella moellendorffii]
          Length = 492

 Score =  182 bits (461), Expect = 1e-43
 Identities = 105/216 (48%), Positives = 133/216 (61%), Gaps = 4/216 (1%)
 Frame = +3

Query: 153 SSKQDLKGQTXXXXXXXXXXRSAAKLALTRGASVIAVDKNENLIPLEHDSTFEKHGY--- 323
           S++ DL G+           R+A +LAL RGASVIAVDKN+ L PL+ D  F  HGY   
Sbjct: 12  SARLDLSGKRVVVVGLGSSGRAAIRLALLRGASVIAVDKNDKLAPLKEDPAF--HGYEMD 69

Query: 324 -LKTILGHCEREALENADRVVVSPGVPIQNYGLSSLLQSGRRVMSELDFAAEVLPKSMKI 500
            + T LG  + E   +A R+VVSPGVP+    L+  + SG   +SEL FAAE  PK++KI
Sbjct: 70  RVSTELGPHQLETFLSASRIVVSPGVPLSEPILAYAMDSGIPTISELGFAAEAFPKAVKI 129

Query: 501 LAVTGTNGKSTVTTFAGQILRQLGVEAFVGGNLGKPLSEAAIQCLTPPPLNRKFEVAVVE 680
            AVTGTNGKSTVTTF GQIL+Q GV  FVGGNLG P S+AA +C   P  +  ++V V+E
Sbjct: 130 AAVTGTNGKSTVTTFTGQILQQAGVRTFVGGNLGTPFSDAACECFMFPSDDPPYQVTVLE 189

Query: 681 VSSYQMEMPNKYFYPSCSGCCGFEPHSRSSRKARDN 788
           VSSYQ+E+P   F PS        P      K+ +N
Sbjct: 190 VSSYQLELPGS-FSPSVGVILNLSPDHLERHKSMEN 224



 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 31/64 (48%), Positives = 43/64 (67%)
 Frame = +1

Query: 736 VAVVLNLTPDHLERHETMTNYAAAKCRVFSHMNYSKLAILPIGNQHLNEAFKDYVDTCNV 915
           V V+LNL+PDHLERH++M NY   KCR+F  M+ SKL+I+P G++ L +    Y      
Sbjct: 205 VGVILNLSPDHLERHKSMENYGETKCRLFERMDSSKLSIIPHGDEFLRKVAYKYNSGSTK 264

Query: 916 AWIG 927
           AW+G
Sbjct: 265 AWLG 268