BLASTX nr result

ID: Coptis23_contig00031228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031228
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273874.2| PREDICTED: uncharacterized protein LOC100259...    80   2e-13
emb|CBI23880.3| unnamed protein product [Vitis vinifera]               80   2e-13
ref|XP_002529003.1| separase, putative [Ricinus communis] gi|223...    67   1e-09
ref|XP_002303173.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_003547059.1| PREDICTED: uncharacterized protein LOC100805...    64   1e-08

>ref|XP_002273874.2| PREDICTED: uncharacterized protein LOC100259948 [Vitis vinifera]
          Length = 2197

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 41/101 (40%), Positives = 61/101 (60%)
 Frame = -3

Query: 314 RNICYTLSSQWSSKYLLIVDMLKCLMDFIRNDCEVGVEDSINE*VDIVDYCLRRCRFASI 135
           R IC +L SQ  +    +V +L C++D I  +C+V + ++  E V++V YC  +CR  S 
Sbjct: 281 RRICSSLFSQKENGSSFVVGVLMCVLDTIAAECKVEMGNTFIEFVELVSYCANKCRITSK 340

Query: 134 DYCKDVGSSLHKIASDFSKVLVPVD*ILRLYAVGMCFMETN 12
           D C  V   L+K+A DF +VL P++ ILRLYA G+ F   N
Sbjct: 341 DLCTAVALHLNKMAGDFRQVLEPLNLILRLYATGLNFTGCN 381


>emb|CBI23880.3| unnamed protein product [Vitis vinifera]
          Length = 2158

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 41/101 (40%), Positives = 61/101 (60%)
 Frame = -3

Query: 314 RNICYTLSSQWSSKYLLIVDMLKCLMDFIRNDCEVGVEDSINE*VDIVDYCLRRCRFASI 135
           R IC +L SQ  +    +V +L C++D I  +C+V + ++  E V++V YC  +CR  S 
Sbjct: 281 RRICSSLFSQKENGSSFVVGVLMCVLDTIAAECKVEMGNTFIEFVELVSYCANKCRITSK 340

Query: 134 DYCKDVGSSLHKIASDFSKVLVPVD*ILRLYAVGMCFMETN 12
           D C  V   L+K+A DF +VL P++ ILRLYA G+ F   N
Sbjct: 341 DLCTAVALHLNKMAGDFRQVLEPLNLILRLYATGLNFTGCN 381


>ref|XP_002529003.1| separase, putative [Ricinus communis] gi|223531543|gb|EEF33373.1|
           separase, putative [Ricinus communis]
          Length = 2153

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/101 (34%), Positives = 58/101 (57%)
 Frame = -3

Query: 317 ARNICYTLSSQWSSKYLLIVDMLKCLMDFIRNDCEVGVEDSINE*VDIVDYCLRRCRFAS 138
           AR IC +L          ++D+LK ++D + + C+V  ++   E V +V YC  +CR AS
Sbjct: 273 ARRICSSLFLHQYDIPQFVIDILKSILDSLASRCKVEDQNLEIEFVQLVSYCADKCRTAS 332

Query: 137 IDYCKDVGSSLHKIASDFSKVLVPVD*ILRLYAVGMCFMET 15
            ++C  V + L+ IA  F +   P+D ILRLYA+G+   ++
Sbjct: 333 TNFCSTVEAHLNNIADVFCQAREPMDKILRLYAIGLTITDS 373


>ref|XP_002303173.1| predicted protein [Populus trichocarpa] gi|222840605|gb|EEE78152.1|
           predicted protein [Populus trichocarpa]
          Length = 1052

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/102 (34%), Positives = 58/102 (56%)
 Frame = -3

Query: 317 ARNICYTLSSQWSSKYLLIVDMLKCLMDFIRNDCEVGVEDSINE*VDIVDYCLRRCRFAS 138
           AR+IC     Q   +Y +  D+L C++D +   C+V VE    E V++V YC  +C  A+
Sbjct: 258 ARHICSVFFLQ-VDRYSVKFDILMCVLDSLAQKCKVEVEIWGTELVELVAYCASKCHAAT 316

Query: 137 IDYCKDVGSSLHKIASDFSKVLVPVD*ILRLYAVGMCFMETN 12
              C      L+ +A  F +V+ P++ I+RLYA+G+ F++ N
Sbjct: 317 TISCSTFAECLNDLAGAFCQVMTPLEMIIRLYAIGLSFIDHN 358


>ref|XP_003547059.1| PREDICTED: uncharacterized protein LOC100805306 [Glycine max]
          Length = 2185

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 34/103 (33%), Positives = 59/103 (57%)
 Frame = -3

Query: 320 IARNICYTLSSQWSSKYLLIVDMLKCLMDFIRNDCEVGVEDSINE*VDIVDYCLRRCRFA 141
           IA  +C +L +   +  L I+D+L    D I  +C+V   ++  + V++V YC  +C+ A
Sbjct: 265 IALRVCSSLFALRDNNSLYIMDIL----DSIVRECKVEEGNTGTDFVELVYYCANKCQTA 320

Query: 140 SIDYCKDVGSSLHKIASDFSKVLVPVD*ILRLYAVGMCFMETN 12
           +  +C    + L+KIA  F +V+ P++ ILRLYA G+  +  N
Sbjct: 321 NASFCSTFAAYLNKIAEHFKQVMTPINSILRLYAAGLLLVSCN 363


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