BLASTX nr result

ID: Coptis23_contig00031213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031213
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297751.1| cc-nbs-lrr resistance protein [Populus trich...    60   2e-07

>ref|XP_002297751.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222845009|gb|EEE82556.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1093

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/81 (44%), Positives = 53/81 (65%), Gaps = 6/81 (7%)
 Frame = +2

Query: 197 SLVSATLQVLLEKLADLS----GSFLKVDDKLRKLERTLVRVDALIQDDE--QKSSTAWQ 358
           + +SATLQV LE LA       G+ + +D  L+KL RTL ++ A++ D E  Q +  A +
Sbjct: 8   AFLSATLQVALENLASPILREFGARIGIDKDLKKLTRTLAKIQAVLNDAEARQINDMAVK 67

Query: 359 VLLRDIEGVAYDADDLLDEIA 421
           + L D++ VAYDADD+LDE+A
Sbjct: 68  LWLSDLKEVAYDADDVLDEVA 88


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