BLASTX nr result

ID: Coptis23_contig00031211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031211
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...    72   5e-11
ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] g...    64   1e-08
emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678...    64   1e-08
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...    62   4e-08

>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
           gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
           protein ccsA [Medicago truncatula]
          Length = 666

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 28/85 (32%), Positives = 48/85 (56%)
 Frame = +2

Query: 53  AHEEIRAKRNKIAWHKTLWSKHIHPKTAALLWKIMHNCAATGEKMQSIGISSVTRCCVCL 232
           A++ I    N + W K LW+ +I P  + + W+++HN   T E ++  G   V+ CC C+
Sbjct: 23  AYKFINETGNHVLWDKFLWNSYIPPSRSFITWRLLHNKLPTDENLRKRGCLIVSICCFCM 82

Query: 233 DACESLQHLIWECPNAQQLWIWMAE 307
            + ES QH+ +EC    +LW W+ +
Sbjct: 83  KSAESSQHIFFECHVTSRLWDWLGK 107


>ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula]
           gi|355506707|gb|AES87849.1| GDSL esterase/lipase
           [Medicago truncatula]
          Length = 1004

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/83 (34%), Positives = 44/83 (53%)
 Frame = +2

Query: 92  WHKTLWSKHIHPKTAALLWKIMHNCAATGEKMQSIGISSVTRCCVCLDACESLQHLIWEC 271
           W K +WSK I P  + L W+++H+   T EK+Q  G    + C +C    E+  HL +EC
Sbjct: 112 WAKLIWSKDIPPSKSILTWRLIHDKVPTDEKLQQRGCQLPSMCSLCGTHVETSFHLFFEC 171

Query: 272 PNAQQLWIWMAEKFQVSHNFTSL 340
             A ++W W A     S +F S+
Sbjct: 172 CFAFRIWCWFASVLDSSLHFQSI 194


>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
           putative protein [Arabidopsis thaliana]
          Length = 473

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 28/76 (36%), Positives = 41/76 (53%)
 Frame = +2

Query: 65  IRAKRNKIAWHKTLWSKHIHPKTAALLWKIMHNCAATGEKMQSIGISSVTRCCVCLDACE 244
           IR   NK+AW+K +W     PK A  +W  +HN  +TG++M    +     C +C  A E
Sbjct: 296 IRTVSNKVAWYKGVWFAQAIPKHAFCMWLAVHNRLSTGDRMTLWNMGVDATCILCNKALE 355

Query: 245 SLQHLIWECPNAQQLW 292
           S  HL + CP A ++W
Sbjct: 356 SRDHLFFSCPFATEIW 371


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 26/80 (32%), Positives = 42/80 (52%)
 Frame = +2

Query: 53  AHEEIRAKRNKIAWHKTLWSKHIHPKTAALLWKIMHNCAATGEKMQSIGISSVTRCCVCL 232
           A E++R  R+ + WH  +W K+  P+ + LLW ++     T +K+   GI    RC +CL
Sbjct: 147 AWEQLRRHRHMVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLCL 206

Query: 233 DACESLQHLIWECPNAQQLW 292
              E   HL +EC   + +W
Sbjct: 207 RNNEDHNHLFFECSYTKAIW 226


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/97 (31%), Positives = 49/97 (50%)
 Frame = +2

Query: 62  EIRAKRNKIAWHKTLWSKHIHPKTAALLWKIMHNCAATGEKMQSIGISSVTRCCVCLDAC 241
           ++R K N++AW+K +W  H  PK     W  + N  +TG +MQ     S  +C  C  + 
Sbjct: 452 QVRKKSNEVAWYKGVWFSHSTPKYQFCTWLALRNRLSTGYRMQLWNNGSDVKCTFCSTSI 511

Query: 242 ESLQHLIWECPNAQQLWIWMAEKFQVSHNFTSLNQAI 352
           E+  HL + C  A  +W  +A K  + H F++  Q I
Sbjct: 512 ETRDHLFFSCSYASAIWTAIA-KNVLQHRFSTDWQTI 547


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