BLASTX nr result

ID: Coptis23_contig00031210 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031210
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACR36043.1| unknown [Zea mays]                                     115   5e-24
ref|XP_002452712.1| hypothetical protein SORBIDRAFT_04g031170 [S...   110   2e-22
gb|ACN33264.1| unknown [Zea mays] gi|413923522|gb|AFW63454.1| hy...   110   2e-22
gb|EEC73824.1| hypothetical protein OsI_08549 [Oryza sativa Indi...   107   1e-21
ref|NP_001047803.1| Os02g0693700 [Oryza sativa Japonica Group] g...   107   1e-21

>gb|ACR36043.1| unknown [Zea mays]
          Length = 145

 Score =  115 bits (287), Expect = 5e-24
 Identities = 57/81 (70%), Positives = 62/81 (76%)
 Frame = -1

Query: 243 GAPNPSDRPDITTLSMVVNDSPPLAIRLWTTMLVNHMSNAHEQNNTKCMEPSPRPFANPP 64
           GA  PSDRP +TTLSMVV DSPPL IRLWTT LVN MS+AHE+ +T+CMEP PRP A PP
Sbjct: 43  GAAWPSDRPAMTTLSMVVKDSPPLDIRLWTTTLVNQMSSAHERKSTECMEPRPRPLARPP 102

Query: 63  FFPYLYVFISAVL*DSTAFSS 1
             PYLYV  SA   D TAFSS
Sbjct: 103 LLPYLYVLRSASRYDLTAFSS 123


>ref|XP_002452712.1| hypothetical protein SORBIDRAFT_04g031170 [Sorghum bicolor]
           gi|241932543|gb|EES05688.1| hypothetical protein
           SORBIDRAFT_04g031170 [Sorghum bicolor]
          Length = 1260

 Score =  110 bits (274), Expect = 2e-22
 Identities = 55/80 (68%), Positives = 61/80 (76%)
 Frame = +2

Query: 2   EEKAVESYKTALMKTYKYXXXXXXXXXXXXXSMHFVLFCSWALLIWFTSIVVHKRIANGG 181
           EEKAV SY+ AL++TYKY             SMH VLF SWALLIWFTS+VVHKRI+NGG
Sbjct: 251 EEKAVRSYREALLRTYKYGKRGGLAKGLGLGSMHSVLFLSWALLIWFTSVVVHKRISNGG 310

Query: 182 ESFTTMLNVVISGLSLGLGA 241
           ESFTTMLNVVI+GLSLG  A
Sbjct: 311 ESFTTMLNVVIAGLSLGQAA 330


>gb|ACN33264.1| unknown [Zea mays] gi|413923522|gb|AFW63454.1| hypothetical protein
           ZEAMMB73_169648 [Zea mays]
          Length = 1262

 Score =  110 bits (274), Expect = 2e-22
 Identities = 55/80 (68%), Positives = 61/80 (76%)
 Frame = +2

Query: 2   EEKAVESYKTALMKTYKYXXXXXXXXXXXXXSMHFVLFCSWALLIWFTSIVVHKRIANGG 181
           EEKAV SY+ AL++TYKY             SMH VLF SWALLIWFTS+VVHKRI+NGG
Sbjct: 248 EEKAVRSYREALLRTYKYGKRGGLAKGLGLGSMHSVLFLSWALLIWFTSVVVHKRISNGG 307

Query: 182 ESFTTMLNVVISGLSLGLGA 241
           ESFTTMLNVVI+GLSLG  A
Sbjct: 308 ESFTTMLNVVIAGLSLGQAA 327


>gb|EEC73824.1| hypothetical protein OsI_08549 [Oryza sativa Indica Group]
          Length = 1264

 Score =  107 bits (266), Expect = 1e-21
 Identities = 53/80 (66%), Positives = 60/80 (75%)
 Frame = +2

Query: 2   EEKAVESYKTALMKTYKYXXXXXXXXXXXXXSMHFVLFCSWALLIWFTSIVVHKRIANGG 181
           EEKAV +Y+ AL++TYKY             SMH VLF SWALLIWFTS+VVHK I+NGG
Sbjct: 254 EEKAVRTYREALLRTYKYGKRGGLAKGLGLGSMHSVLFLSWALLIWFTSVVVHKNISNGG 313

Query: 182 ESFTTMLNVVISGLSLGLGA 241
           ESFTTMLNVVI+GLSLG  A
Sbjct: 314 ESFTTMLNVVIAGLSLGQAA 333


>ref|NP_001047803.1| Os02g0693700 [Oryza sativa Japonica Group]
           gi|27368851|emb|CAD59583.1| MDR-like ABC transporter
           [Oryza sativa Japonica Group]
           gi|41052997|dbj|BAD07906.1| MDR-like ABC transporter
           [Oryza sativa Japonica Group]
           gi|41053280|dbj|BAD07706.1| MDR-like ABC transporter
           [Oryza sativa Japonica Group]
           gi|113537334|dbj|BAF09717.1| Os02g0693700 [Oryza sativa
           Japonica Group] gi|222623481|gb|EEE57613.1| hypothetical
           protein OsJ_08005 [Oryza sativa Japonica Group]
          Length = 1264

 Score =  107 bits (266), Expect = 1e-21
 Identities = 53/80 (66%), Positives = 60/80 (75%)
 Frame = +2

Query: 2   EEKAVESYKTALMKTYKYXXXXXXXXXXXXXSMHFVLFCSWALLIWFTSIVVHKRIANGG 181
           EEKAV +Y+ AL++TYKY             SMH VLF SWALLIWFTS+VVHK I+NGG
Sbjct: 254 EEKAVRTYREALLRTYKYGKRGGLAKGLGLGSMHSVLFLSWALLIWFTSVVVHKNISNGG 313

Query: 182 ESFTTMLNVVISGLSLGLGA 241
           ESFTTMLNVVI+GLSLG  A
Sbjct: 314 ESFTTMLNVVIAGLSLGQAA 333


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