BLASTX nr result

ID: Coptis23_contig00031188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031188
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535003.1| conserved hypothetical protein [Ricinus comm...    69   5e-10
ref|XP_002539514.1| conserved hypothetical protein [Ricinus comm...    69   5e-10
ref|XP_002540127.1| conserved hypothetical protein [Ricinus comm...    69   5e-10

>ref|XP_002535003.1| conserved hypothetical protein [Ricinus communis]
           gi|223524217|gb|EEF27385.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 81

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 29/35 (82%), Positives = 29/35 (82%)
 Frame = -1

Query: 235 AGCRPRWSWEPTYTFLGLAFPQHRNKERALKRNQP 131
           AGCRPRWSWEPTYTFLGLA PQH  K RA KR QP
Sbjct: 28  AGCRPRWSWEPTYTFLGLALPQHLKKRRAPKRKQP 62


>ref|XP_002539514.1| conserved hypothetical protein [Ricinus communis]
           gi|223505440|gb|EEF22868.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 124

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 29/35 (82%), Positives = 29/35 (82%)
 Frame = -1

Query: 235 AGCRPRWSWEPTYTFLGLAFPQHRNKERALKRNQP 131
           AGCRPRWSWEPTYTFLGLA PQH  K RA KR QP
Sbjct: 71  AGCRPRWSWEPTYTFLGLALPQHLKKRRAPKRKQP 105


>ref|XP_002540127.1| conserved hypothetical protein [Ricinus communis]
           gi|223498957|gb|EEF22255.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 108

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 29/35 (82%), Positives = 29/35 (82%)
 Frame = -1

Query: 235 AGCRPRWSWEPTYTFLGLAFPQHRNKERALKRNQP 131
           AGCRPRWSWEPTYTFLGLA PQH  K RA KR QP
Sbjct: 55  AGCRPRWSWEPTYTFLGLALPQHLKKRRAPKRKQP 89


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