BLASTX nr result

ID: Coptis23_contig00031182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031182
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509798.1| conserved hypothetical protein [Ricinus comm...   136   2e-30
ref|XP_002529729.1| conserved hypothetical protein [Ricinus comm...   135   5e-30
ref|XP_003637349.1| hypothetical protein MTR_082s0033 [Medicago ...   132   4e-29
ref|XP_002267590.1| PREDICTED: uncharacterized protein LOC100243...   132   4e-29
ref|XP_002303587.1| predicted protein [Populus trichocarpa] gi|2...   132   4e-29

>ref|XP_002509798.1| conserved hypothetical protein [Ricinus communis]
           gi|223549697|gb|EEF51185.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 293

 Score =  136 bits (343), Expect = 2e-30
 Identities = 64/120 (53%), Positives = 81/120 (67%)
 Frame = -3

Query: 440 KSVLRMQHLQNISVWAAGEAGMPSYAAFLGNCFGKCSEASGLPIDPSFIPCQRCEAILQP 261
           KS L+++HLQN+S+W A EA +PS +AF G       EA G P DP+  PCQRCE +LQP
Sbjct: 42  KSFLKLEHLQNLSLWTAREASIPSLSAFFGRQLAAAGEALGFPSDPALFPCQRCETLLQP 101

Query: 260 GFNCTVRIETNGAKVRKRRNKSYVPPKNIVVYTCHFCSNRNVKRGTPKHHMKEIFASELK 81
           G NCTVRI    AK R+R  K     +N VVY CHFCS++N+KRG+ K +MKEI  S+ K
Sbjct: 102 GLNCTVRIAKTLAKSRRRHKKPNTSMQNNVVYNCHFCSHQNLKRGSTKGYMKEICPSKPK 161


>ref|XP_002529729.1| conserved hypothetical protein [Ricinus communis]
           gi|223530793|gb|EEF32658.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 290

 Score =  135 bits (340), Expect = 5e-30
 Identities = 66/120 (55%), Positives = 83/120 (69%)
 Frame = -3

Query: 440 KSVLRMQHLQNISVWAAGEAGMPSYAAFLGNCFGKCSEASGLPIDPSFIPCQRCEAILQP 261
           KS L+++HLQN+SVWA+ EA +PS +AF G  F    EA GL  D + IPCQRCE +LQP
Sbjct: 42  KSFLKLEHLQNLSVWASREASIPSLSAFFGRQFAAAGEALGLLPDHALIPCQRCETLLQP 101

Query: 260 GFNCTVRIETNGAKVRKRRNKSYVPPKNIVVYTCHFCSNRNVKRGTPKHHMKEIFASELK 81
           G NCTVRI    AK R+R  K     ++ VVY CHFCS+RN+KRG  K +MKEI+ S+ K
Sbjct: 102 GLNCTVRIVKTLAKSRRRHKKPNTSMQSNVVYNCHFCSHRNLKRGCAKGYMKEIWPSKPK 161


>ref|XP_003637349.1| hypothetical protein MTR_082s0033 [Medicago truncatula]
           gi|355503284|gb|AES84487.1| hypothetical protein
           MTR_082s0033 [Medicago truncatula]
          Length = 287

 Score =  132 bits (332), Expect = 4e-29
 Identities = 66/125 (52%), Positives = 89/125 (71%), Gaps = 1/125 (0%)
 Frame = -3

Query: 440 KSVLRMQHLQNISVWAAGEAGMPSYAAFLGNCFGKCSEASGLPIDPSFIPCQRCEAILQP 261
           KS LR+ HL+N+++WA  +  +PS +AF G      SEASG+  DPS I CQRCE +L P
Sbjct: 40  KSHLRIDHLKNLALWATTDPNIPSLSAFYGRQLAAVSEASGVAPDPSLITCQRCETVLHP 99

Query: 260 GFNCTVRIETNGAKVRKRRNKSYVP-PKNIVVYTCHFCSNRNVKRGTPKHHMKEIFASEL 84
           GFN TVRIE N +K  +RRNK +    +N VVY CHFCS+RN+KRGT K H+K+I ++++
Sbjct: 100 GFNSTVRIEKNRSK--RRRNKKFGSISQNNVVYNCHFCSHRNLKRGTAKGHVKKICSTKV 157

Query: 83  KTSSE 69
           K+S E
Sbjct: 158 KSSLE 162


>ref|XP_002267590.1| PREDICTED: uncharacterized protein LOC100243390 [Vitis vinifera]
          Length = 301

 Score =  132 bits (332), Expect = 4e-29
 Identities = 63/116 (54%), Positives = 83/116 (71%)
 Frame = -3

Query: 446 DLKSVLRMQHLQNISVWAAGEAGMPSYAAFLGNCFGKCSEASGLPIDPSFIPCQRCEAIL 267
           ++KS+L++QHL+++++WA+ EA +PS  AF G+    C    G+P D S  PCQRCE IL
Sbjct: 41  NMKSMLKLQHLKSLAMWASQEASIPSLGAFFGHRLMSC----GVP-DQSLFPCQRCETIL 95

Query: 266 QPGFNCTVRIETNGAKVRKRRNKSYVPPKNIVVYTCHFCSNRNVKRGTPKHHMKEI 99
           QPG NCTVRI+ N A+ +    KSY   +N V+Y CHFCS+ NVKRGTPK HMKEI
Sbjct: 96  QPGQNCTVRIKPNRARAQHGTKKSYASTQNNVIYWCHFCSHHNVKRGTPKGHMKEI 151


>ref|XP_002303587.1| predicted protein [Populus trichocarpa] gi|222841019|gb|EEE78566.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score =  132 bits (332), Expect = 4e-29
 Identities = 62/115 (53%), Positives = 80/115 (69%), Gaps = 1/115 (0%)
 Frame = -3

Query: 440 KSVLRMQHLQNISVWAAGEAGMPSYAAFLGNCFGKCSEASGLPIDPSFI-PCQRCEAILQ 264
           +S+LR++HLQN++ WA  EA +PS AAF G  F   +EA G+P+DPS +  CQRC   L+
Sbjct: 37  RSLLRLEHLQNLASWATEEASIPSLAAFFGRQFASSAEALGVPLDPSALFQCQRCGTFLR 96

Query: 263 PGFNCTVRIETNGAKVRKRRNKSYVPPKNIVVYTCHFCSNRNVKRGTPKHHMKEI 99
           PGFNCT +IE N +K R+R  +     KN VVY CH C + N+KRGTPK HMKEI
Sbjct: 97  PGFNCTTQIEKNQSKARRRHKRFSTSTKNNVVYKCHHCLHINLKRGTPKGHMKEI 151


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