BLASTX nr result

ID: Coptis23_contig00031170 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031170
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309051.1| predicted protein [Populus trichocarpa] gi|2...   104   6e-21
emb|CBI16149.3| unnamed protein product [Vitis vinifera]              102   2e-20
ref|XP_002298361.1| predicted protein [Populus trichocarpa] gi|2...   102   2e-20
ref|XP_002283955.1| PREDICTED: uncharacterized protein At3g17950...   102   2e-20
ref|XP_004143109.1| PREDICTED: uncharacterized protein At3g17950...   100   1e-19

>ref|XP_002309051.1| predicted protein [Populus trichocarpa] gi|222855027|gb|EEE92574.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score =  104 bits (260), Expect = 6e-21
 Identities = 53/90 (58%), Positives = 61/90 (67%)
 Frame = +1

Query: 211 AQQQEEGWPLGLQPLNMRAGVATNHDFSGSMSFNXXXXXXXXXXXXXXXXXXXXXXGSFF 390
           AQQQE+GWPLGL+PLN R G+  N DF+GS+SF+                      GSFF
Sbjct: 5   AQQQEDGWPLGLRPLNARVGLVRNRDFNGSISFSTLLTASNSSFTDSSSDLDTESTGSFF 64

Query: 391 HDKSITLGSLIGVSSILELSRRSTRGRRAD 480
           HDKS+TLGSLIGVSSILELSRRSTRGR  +
Sbjct: 65  HDKSLTLGSLIGVSSILELSRRSTRGRTTE 94


>emb|CBI16149.3| unnamed protein product [Vitis vinifera]
          Length = 205

 Score =  102 bits (255), Expect = 2e-20
 Identities = 54/88 (61%), Positives = 60/88 (68%)
 Frame = +1

Query: 217 QQEEGWPLGLQPLNMRAGVATNHDFSGSMSFNXXXXXXXXXXXXXXXXXXXXXXGSFFHD 396
           QQEEGWPLGLQPLN+R G+A   DFSGS+SFN                      GSFFHD
Sbjct: 3   QQEEGWPLGLQPLNVRIGLARIGDFSGSISFNTLLTGSPSSSTDSSSDLDTESTGSFFHD 62

Query: 397 KSITLGSLIGVSSILELSRRSTRGRRAD 480
           KSITLGSLIGVSSI+EL+ RS RGRRA+
Sbjct: 63  KSITLGSLIGVSSIIELTGRSVRGRRAE 90


>ref|XP_002298361.1| predicted protein [Populus trichocarpa] gi|222845619|gb|EEE83166.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score =  102 bits (255), Expect = 2e-20
 Identities = 53/88 (60%), Positives = 59/88 (67%)
 Frame = +1

Query: 217 QQEEGWPLGLQPLNMRAGVATNHDFSGSMSFNXXXXXXXXXXXXXXXXXXXXXXGSFFHD 396
           +QEEGWPLGLQPLN R G+A N DFSGS SFN                      GSFFHD
Sbjct: 3   RQEEGWPLGLQPLNARVGIARNGDFSGSRSFNTLITGSPTSSTDSSSDLDTESTGSFFHD 62

Query: 397 KSITLGSLIGVSSILELSRRSTRGRRAD 480
           KSITLGSLIGVS+ILELSR+STR R+ +
Sbjct: 63  KSITLGSLIGVSNILELSRKSTRTRKVE 90


>ref|XP_002283955.1| PREDICTED: uncharacterized protein At3g17950 [Vitis vinifera]
          Length = 212

 Score =  102 bits (255), Expect = 2e-20
 Identities = 54/88 (61%), Positives = 60/88 (68%)
 Frame = +1

Query: 217 QQEEGWPLGLQPLNMRAGVATNHDFSGSMSFNXXXXXXXXXXXXXXXXXXXXXXGSFFHD 396
           QQEEGWPLGLQPLN+R G+A   DFSGS+SFN                      GSFFHD
Sbjct: 3   QQEEGWPLGLQPLNVRIGLARIGDFSGSISFNTLLTGSPSSSTDSSSDLDTESTGSFFHD 62

Query: 397 KSITLGSLIGVSSILELSRRSTRGRRAD 480
           KSITLGSLIGVSSI+EL+ RS RGRRA+
Sbjct: 63  KSITLGSLIGVSSIIELTGRSVRGRRAE 90


>ref|XP_004143109.1| PREDICTED: uncharacterized protein At3g17950-like [Cucumis sativus]
          Length = 206

 Score =  100 bits (249), Expect = 1e-19
 Identities = 52/88 (59%), Positives = 58/88 (65%)
 Frame = +1

Query: 217 QQEEGWPLGLQPLNMRAGVATNHDFSGSMSFNXXXXXXXXXXXXXXXXXXXXXXGSFFHD 396
           QQ +GWPLGLQPLN+R GV  N D+ GS+SFN                      GSFFHD
Sbjct: 3   QQGDGWPLGLQPLNVRVGVPGNRDYLGSVSFNTLMTASPISFSDSSSDLDTESTGSFFHD 62

Query: 397 KSITLGSLIGVSSILELSRRSTRGRRAD 480
           KSITLGSLIGVS+ILELSRRS RGRR +
Sbjct: 63  KSITLGSLIGVSNILELSRRSIRGRRTE 90


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