BLASTX nr result

ID: Coptis23_contig00031169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031169
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279778.1| PREDICTED: uncharacterized protein LOC100245...   141   6e-32
ref|XP_002314242.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
emb|CBI15641.3| unnamed protein product [Vitis vinifera]              129   2e-28
ref|XP_003556813.1| PREDICTED: uncharacterized protein LOC100818...   119   2e-25
ref|XP_002532585.1| conserved hypothetical protein [Ricinus comm...   118   6e-25

>ref|XP_002279778.1| PREDICTED: uncharacterized protein LOC100245683 [Vitis vinifera]
          Length = 792

 Score =  141 bits (355), Expect = 6e-32
 Identities = 69/122 (56%), Positives = 90/122 (73%)
 Frame = -2

Query: 393  LKTGLNSKDFLYLWRSIADGLDQFIFSSIVMGGATFSKRGVNQFSTDMQALFLVFQPFCV 214
            ++  LN +DFL LWRS+A+GLD FIFSSI      FS+ GVNQ   DM+ALF VFQPFC 
Sbjct: 671  IERSLNPRDFLDLWRSVAEGLDHFIFSSIFGIDIGFSEEGVNQIGADMRALFSVFQPFCA 730

Query: 213  RPQAFFPCIRDSLKLFKLDLEDAKNLQSVLAKGDKRMEVLQSSGVSYISPDQAEKILMIR 34
            RP+AFFPCIRDSL+L ++D  + K LQ+VL+  + R++ L+S G+S++S  Q EKIL  R
Sbjct: 731  RPEAFFPCIRDSLRLLEMDKGEVKYLQAVLSSDENRIKCLRSCGISHVSFGQVEKILRNR 790

Query: 33   KF 28
            KF
Sbjct: 791  KF 792


>ref|XP_002314242.1| predicted protein [Populus trichocarpa] gi|222850650|gb|EEE88197.1|
            predicted protein [Populus trichocarpa]
          Length = 838

 Score =  136 bits (343), Expect = 2e-30
 Identities = 68/120 (56%), Positives = 84/120 (70%)
 Frame = -2

Query: 390  KTGLNSKDFLYLWRSIADGLDQFIFSSIVMGGATFSKRGVNQFSTDMQALFLVFQPFCVR 211
            KTGLN KDFL LWRS+AD LDQF+  SI   G  FS  G+NQF +DMQALF VFQPFC R
Sbjct: 714  KTGLNPKDFLDLWRSVADALDQFVSRSIFTSGIRFSNEGINQFDSDMQALFHVFQPFCSR 773

Query: 210  PQAFFPCIRDSLKLFKLDLEDAKNLQSVLAKGDKRMEVLQSSGVSYISPDQAEKILMIRK 31
            P+AFFP IR+ LKL K+  E+AK L   L+K     + L S G+S++S DQ +K+L  R+
Sbjct: 774  PEAFFPSIREILKLLKMSKEEAKLLLVALSKNKNGTKCLHSLGISHLSFDQVDKVLSNRR 833


>emb|CBI15641.3| unnamed protein product [Vitis vinifera]
          Length = 1659

 Score =  129 bits (325), Expect = 2e-28
 Identities = 61/109 (55%), Positives = 82/109 (75%)
 Frame = -2

Query: 393 LKTGLNSKDFLYLWRSIADGLDQFIFSSIVMGGATFSKRGVNQFSTDMQALFLVFQPFCV 214
           ++  LN +DFL LWRS+A+GLD FIFSSI      FS+ GVNQ   DM+ALF VFQPFC 
Sbjct: 627 IERSLNPRDFLDLWRSVAEGLDHFIFSSIFGIDIGFSEEGVNQIGADMRALFSVFQPFCA 686

Query: 213 RPQAFFPCIRDSLKLFKLDLEDAKNLQSVLAKGDKRMEVLQSSGVSYIS 67
           RP+AFFPCIRDSL+L ++D  + K LQ+VL+  + R++ L+S G+S++S
Sbjct: 687 RPEAFFPCIRDSLRLLEMDKGEVKYLQAVLSSDENRIKCLRSCGISHVS 735


>ref|XP_003556813.1| PREDICTED: uncharacterized protein LOC100818068 [Glycine max]
          Length = 1027

 Score =  119 bits (299), Expect = 2e-25
 Identities = 59/112 (52%), Positives = 75/112 (66%)
 Frame = -2

Query: 393  LKTGLNSKDFLYLWRSIADGLDQFIFSSIVMGGATFSKRGVNQFSTDMQALFLVFQPFCV 214
            +K  LN KDFL LWRSIA+GLD +I  SIV     F K GV QF  DMQAL  +FQP+C 
Sbjct: 785  MKISLNKKDFLDLWRSIAEGLDHYISWSIVRSENWFFKMGVTQFEADMQALIFIFQPYCA 844

Query: 213  RPQAFFPCIRDSLKLFKLDLEDAKNLQSVLAKGDKRMEVLQSSGVSYISPDQ 58
            RPQAFFPCI + LKL KL  E+ K +Q+ L++ +   E L   G+S++S +Q
Sbjct: 845  RPQAFFPCINEILKLLKLKKEEEKLMQAFLSRNENGSECLHLYGISHLSVNQ 896


>ref|XP_002532585.1| conserved hypothetical protein [Ricinus communis]
            gi|223527694|gb|EEF29802.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 829

 Score =  118 bits (295), Expect = 6e-25
 Identities = 57/102 (55%), Positives = 70/102 (68%)
 Frame = -2

Query: 393  LKTGLNSKDFLYLWRSIADGLDQFIFSSIVMGGATFSKRGVNQFSTDMQALFLVFQPFCV 214
            LK  LN KDF  LWRS+ADGLD FI SSI++    FS  G+NQF  DMQALF VFQPFC 
Sbjct: 721  LKLSLNPKDFFDLWRSVADGLDHFISSSILVSDILFSSFGINQFEADMQALFFVFQPFCA 780

Query: 213  RPQAFFPCIRDSLKLFKLDLEDAKNLQSVLAKGDKRMEVLQS 88
            RP AFFPCIR++++L K+  E+ K LQ V +  +   + L S
Sbjct: 781  RPDAFFPCIRETIRLLKMSREEEKYLQVVTSTVENPTKCLHS 822


Top