BLASTX nr result

ID: Coptis23_contig00031158 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031158
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303421.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_003635529.1| PREDICTED: uncharacterized protein LOC100853...    56   3e-06
ref|XP_003635213.1| PREDICTED: uncharacterized protein LOC100854...    56   3e-06

>ref|XP_002303421.1| predicted protein [Populus trichocarpa] gi|222840853|gb|EEE78400.1|
           predicted protein [Populus trichocarpa]
          Length = 490

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 38/86 (44%), Positives = 43/86 (50%)
 Frame = -1

Query: 383 HSDIKFDESDGPDSDCNEEIEMETCTGEIXXXXXXXXXXXXPSHTYQSDKRMEMDNSNLY 204
           HSDIKFDESD     C+EEIE E     +             SH             NL 
Sbjct: 421 HSDIKFDESD-----CDEEIETEEPPAGVCPPPERCPPPVPSSHV------------NL- 462

Query: 203 RRNSLPRVHPKLPDYDALSARFEALK 126
             + + RVHPKLPDYD L+ARFEALK
Sbjct: 463 --DPVARVHPKLPDYDELAARFEALK 486


>ref|XP_003635529.1| PREDICTED: uncharacterized protein LOC100853848 [Vitis vinifera]
          Length = 436

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 38/86 (44%), Positives = 43/86 (50%)
 Frame = -1

Query: 383 HSDIKFDESDGPDSDCNEEIEMETCTGEIXXXXXXXXXXXXPSHTYQSDKRMEMDNSNLY 204
           HS+IKFDESD      +EEIE +     I            PSH  QS            
Sbjct: 367 HSNIKFDESDS-----DEEIETQDTYAGIQPPPGRDPPPVPPSHFQQSP----------- 410

Query: 203 RRNSLPRVHPKLPDYDALSARFEALK 126
               +P VHPKLPDYDAL+ARFEALK
Sbjct: 411 ----VPSVHPKLPDYDALTARFEALK 432


>ref|XP_003635213.1| PREDICTED: uncharacterized protein LOC100854227, partial [Vitis
           vinifera]
          Length = 361

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 38/86 (44%), Positives = 43/86 (50%)
 Frame = -1

Query: 383 HSDIKFDESDGPDSDCNEEIEMETCTGEIXXXXXXXXXXXXPSHTYQSDKRMEMDNSNLY 204
           HS+IKFDESD      +EEIE +     I            PSH  QS            
Sbjct: 292 HSNIKFDESDS-----DEEIETQDTYAGIQPPPGRDPPPVPPSHFQQSP----------- 335

Query: 203 RRNSLPRVHPKLPDYDALSARFEALK 126
               +P VHPKLPDYDAL+ARFEALK
Sbjct: 336 ----VPSVHPKLPDYDALTARFEALK 357


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