BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031157
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containi...   149   3e-34
ref|XP_003635359.1| PREDICTED: pentatricopeptide repeat-containi...   149   3e-34
emb|CBI41082.3| unnamed protein product [Vitis vinifera]              149   3e-34
emb|CBI28140.3| unnamed protein product [Vitis vinifera]              139   4e-31
ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containi...   139   4e-31

>ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 640

 Score =  149 bits (376), Expect = 3e-34
 Identities = 68/93 (73%), Positives = 81/93 (87%)
 Frame = +1

Query: 25  GYKPLISSVLQDMNDKAKEHALAYHSEKLAFAFGLLSTAPGSPIRIVKNLQVCEDCHLAF 204
           GY PL +SVLQD ++K KE+ALA+HSEKLA AFGLLSTAPGS IRIVKNL+VC+DCH+A 
Sbjct: 548 GYAPLTASVLQDFDEKEKENALAHHSEKLAIAFGLLSTAPGSTIRIVKNLRVCDDCHIAI 607

Query: 205 KLLSVIYEWEIIVRDRNRFHHFVGGSCTCRDFW 303
           KL+S  Y+  IIVRDRNRFHHFV GSC+C+D+W
Sbjct: 608 KLISRTYKRRIIVRDRNRFHHFVNGSCSCKDYW 640


>ref|XP_003635359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like, partial [Vitis vinifera]
          Length = 115

 Score =  149 bits (376), Expect = 3e-34
 Identities = 68/93 (73%), Positives = 81/93 (87%)
 Frame = +1

Query: 25  GYKPLISSVLQDMNDKAKEHALAYHSEKLAFAFGLLSTAPGSPIRIVKNLQVCEDCHLAF 204
           GY PL +SVLQD ++K KE+ALA+HSEKLA AFGLLSTAPGS IRIVKNL+VC+DCH+A 
Sbjct: 23  GYAPLTASVLQDFDEKEKENALAHHSEKLAIAFGLLSTAPGSTIRIVKNLRVCDDCHIAI 82

Query: 205 KLLSVIYEWEIIVRDRNRFHHFVGGSCTCRDFW 303
           KL+S  Y+  IIVRDRNRFHHFV GSC+C+D+W
Sbjct: 83  KLISRTYKRRIIVRDRNRFHHFVNGSCSCKDYW 115


>emb|CBI41082.3| unnamed protein product [Vitis vinifera]
          Length = 413

 Score =  149 bits (376), Expect = 3e-34
 Identities = 68/93 (73%), Positives = 81/93 (87%)
 Frame = +1

Query: 25  GYKPLISSVLQDMNDKAKEHALAYHSEKLAFAFGLLSTAPGSPIRIVKNLQVCEDCHLAF 204
           GY PL +SVLQD ++K KE+ALA+HSEKLA AFGLLSTAPGS IRIVKNL+VC+DCH+A 
Sbjct: 321 GYAPLTASVLQDFDEKEKENALAHHSEKLAIAFGLLSTAPGSTIRIVKNLRVCDDCHIAI 380

Query: 205 KLLSVIYEWEIIVRDRNRFHHFVGGSCTCRDFW 303
           KL+S  Y+  IIVRDRNRFHHFV GSC+C+D+W
Sbjct: 381 KLISRTYKRRIIVRDRNRFHHFVNGSCSCKDYW 413


>emb|CBI28140.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  139 bits (349), Expect = 4e-31
 Identities = 64/93 (68%), Positives = 74/93 (79%)
 Frame = +1

Query: 25  GYKPLISSVLQDMNDKAKEHALAYHSEKLAFAFGLLSTAPGSPIRIVKNLQVCEDCHLAF 204
           GY P  S VL DM++K KE+ L+ HSEKLA AFGLLST PG+PIR+VKNL+VC DCH A 
Sbjct: 488 GYVPDKSEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAM 547

Query: 205 KLLSVIYEWEIIVRDRNRFHHFVGGSCTCRDFW 303
           K +S +Y  EIIVRDRNRFHHF  GSC+CRDFW
Sbjct: 548 KFISEVYNREIIVRDRNRFHHFTKGSCSCRDFW 580


>ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 711

 Score =  139 bits (349), Expect = 4e-31
 Identities = 64/93 (68%), Positives = 74/93 (79%)
 Frame = +1

Query: 25  GYKPLISSVLQDMNDKAKEHALAYHSEKLAFAFGLLSTAPGSPIRIVKNLQVCEDCHLAF 204
           GY P  S VL DM++K KE+ L+ HSEKLA AFGLLST PG+PIR+VKNL+VC DCH A 
Sbjct: 619 GYVPDKSEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAM 678

Query: 205 KLLSVIYEWEIIVRDRNRFHHFVGGSCTCRDFW 303
           K +S +Y  EIIVRDRNRFHHF  GSC+CRDFW
Sbjct: 679 KFISEVYNREIIVRDRNRFHHFTKGSCSCRDFW 711