BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031152
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    70   1e-10
ref|XP_002308788.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
ref|XP_002322522.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|XP_002867770.1| hypothetical protein ARALYDRAFT_329378 [Arab...    65   6e-09

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 46/124 (37%), Positives = 68/124 (54%), Gaps = 6/124 (4%)
 Frame = +1

Query: 13  CCYIGNINRVAHVDGVLYWIGLRGVGVGSWKSIVSFDLRNEKFGEVSWPAFEDSSYRDLG 192
           C +    N V   +G L+W+            +V+ DL  E + EV  P ++D ++  + 
Sbjct: 199 CVHYPGANGV-FANGALHWVVGENPESNVANIVVALDLGVEDYREVLQPEYKDKNFY-ID 256

Query: 193 LGVLRGSLCTFSFHL-ECVDIWMIKNYGVKGTWTKHFSIARSTM-----HLEPLFLLKSG 354
           LGVLRG LC  +  L E VD+WM+K YGVK +WTK FS+A+  +      L+PL   KSG
Sbjct: 257 LGVLRGCLCFLANFLGERVDVWMMKEYGVKESWTKLFSVAQYEVIGFLRSLKPLAYSKSG 316

Query: 355 EILL 366
           + +L
Sbjct: 317 DEVL 320


>ref|XP_002308788.1| predicted protein [Populus trichocarpa] gi|222854764|gb|EEE92311.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 38/109 (34%), Positives = 63/109 (57%), Gaps = 7/109 (6%)
 Frame = +1

Query: 61  LYWIGLRGVGVGSWKSIVSFDLRNEKFGEVSWPAFEDSSYR-DLGLGVLRGSLCTF-SFH 234
           L+WI  +   +G    ++ FD+R++KF E+  P +E+      + +GVL G+LC   ++ 
Sbjct: 221 LHWIVPQRRELGIRDCVLGFDIRDDKFFELPQPDYENKGMNFHVDVGVLEGNLCVMCNYE 280

Query: 235 LECVDIWMIKNYGVKGTWTKHFSI-----ARSTMHLEPLFLLKSGEILL 366
             CVD+W++K YGVK +W K FS+       + M L PL   K G+++L
Sbjct: 281 HVCVDVWVMKEYGVKESWCKMFSVHAIKWISAFMFLRPLVYSKGGDMVL 329


>ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|222852550|gb|EEE90097.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 45/114 (39%), Positives = 62/114 (54%), Gaps = 6/114 (5%)
 Frame = +1

Query: 46  HVDGVLYWIGLRGVGVGSWKSIVSFDLRNEKFGEVSWPAFEDSSYRDLGLGVLRGSLCTF 225
           HVDG L W  +    +GS  SIV+FDL  E F EV  P +    Y  + LGVL+G LC  
Sbjct: 288 HVDGKLCWPVMPEGSIGSAWSIVAFDLAQEMFEEVVQPDYGAVGYERV-LGVLQGWLCVM 346

Query: 226 -SFHLECVDIWMIKNYGVKGTWTKHFSIARSTMHL-----EPLFLLKSGEILLQ 369
            ++     D+W++K +GV+ +WTK FSI      L      PL +   GE+LL+
Sbjct: 347 CNYQGVRADVWVLKEFGVRDSWTKLFSIPYLDDPLWFHYSVPLCIDVGGEVLLE 400


>ref|XP_002322522.1| predicted protein [Populus trichocarpa] gi|222867152|gb|EEF04283.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 38/112 (33%), Positives = 64/112 (57%), Gaps = 8/112 (7%)
 Frame = +1

Query: 61  LYWIGLRGVGVGSWKSIVSFDLRNEKFGEVSWPAFEDSSYR-DLGLGVLRGSLCTF-SFH 234
           L+WI  +   +G    ++ FD+RN+KF E+  P +E       + +GVL G+LC   ++ 
Sbjct: 229 LHWIIPQRRQLGIRDCVLGFDIRNDKFFELPQPNYESKGMSFQVDVGVLEGNLCVMCNYE 288

Query: 235 LECVDIWMIKNYGVKGTWTKHFSI-----ARSTMHLEPLFLLK-SGEILLQM 372
             CVD+W+++ YG+K +W K FS+       + M L PL   K  G++LL++
Sbjct: 289 YVCVDVWVMREYGMKESWCKMFSVQGIKWIGAFMFLRPLIYSKDGGKVLLEV 340


>ref|XP_002867770.1| hypothetical protein ARALYDRAFT_329378 [Arabidopsis lyrata subsp.
           lyrata] gi|297313606|gb|EFH44029.1| hypothetical protein
           ARALYDRAFT_329378 [Arabidopsis lyrata subsp. lyrata]
          Length = 406

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/85 (36%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
 Frame = +1

Query: 61  LYWIGLRGVGVGSWKSIVSFDLRNEKFGEVSWPAFEDSSYRDLGLGVLRGSLCTFSFH-L 237
           L+W+  R  G+ ++ +I+ FDL  E+FG + +P  ED ++ ++ +GVL G LC    H  
Sbjct: 219 LHWVLPRRPGLIAFNAIIRFDLDTEEFGILDFP--EDLAHENIDIGVLDGCLCLMCNHEF 276

Query: 238 ECVDIWMIKNYGVKGTWTKHFSIAR 312
             VD+W++K Y V+G+W+K F + +
Sbjct: 277 SYVDVWIMKEYKVEGSWSKLFRVPK 301