BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031146
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21323.3| unnamed protein product [Vitis vinifera]              107   8e-22
ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containi...   107   8e-22
ref|XP_003549091.1| PREDICTED: pentatricopeptide repeat-containi...   105   5e-21
ref|XP_002336062.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_002298642.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20

>emb|CBI21323.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  107 bits (268), Expect = 8e-22
 Identities = 50/84 (59%), Positives = 65/84 (77%)
 Frame = -3

Query: 253 KSGFLPL*F*NNLSRNLCKNGKTEELVEVYHILSSKDYFSNMERYNMMISFLCTAGRVKE 74
           K  F  L   +NL RNLCK GK +EL+EV+HILSS++YFS++E Y++M+SFLC AGRV+E
Sbjct: 357 KESFPTLLTLSNLGRNLCKRGKADELLEVFHILSSRNYFSDLETYSVMVSFLCKAGRVRE 416

Query: 73  AYAGIQEMKKKGFGPDVFSYNSVM 2
           AY  +QEMKK G  PD+ SYN +M
Sbjct: 417 AYGVLQEMKKNGLDPDISSYNCLM 440


>ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14080
           [Vitis vinifera]
          Length = 660

 Score =  107 bits (268), Expect = 8e-22
 Identities = 50/84 (59%), Positives = 65/84 (77%)
 Frame = -3

Query: 253 KSGFLPL*F*NNLSRNLCKNGKTEELVEVYHILSSKDYFSNMERYNMMISFLCTAGRVKE 74
           K  F  L   +NL RNLCK GK +EL+EV+HILSS++YFS++E Y++M+SFLC AGRV+E
Sbjct: 357 KESFPTLLTLSNLGRNLCKRGKADELLEVFHILSSRNYFSDLETYSVMVSFLCKAGRVRE 416

Query: 73  AYAGIQEMKKKGFGPDVFSYNSVM 2
           AY  +QEMKK G  PD+ SYN +M
Sbjct: 417 AYGVLQEMKKNGLDPDISSYNCLM 440


>ref|XP_003549091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g14080-like [Glycine max]
          Length = 647

 Score =  105 bits (261), Expect = 5e-21
 Identities = 46/74 (62%), Positives = 63/74 (85%)
 Frame = -3

Query: 223 NNLSRNLCKNGKTEELVEVYHILSSKDYFSNMERYNMMISFLCTAGRVKEAYAGIQEMKK 44
           +NLSRNLC +GK +EL+EV+H+L+S +YF ++E YN+M+SFLC AGRV+E Y+ +QEMKK
Sbjct: 363 SNLSRNLCGHGKVDELLEVFHVLNSHNYFKDVEGYNVMVSFLCKAGRVREGYSVLQEMKK 422

Query: 43  KGFGPDVFSYNSVM 2
           KGF P+V SYN +M
Sbjct: 423 KGFRPNVTSYNYIM 436


>ref|XP_002336062.1| predicted protein [Populus trichocarpa] gi|222869847|gb|EEF06978.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score =  103 bits (258), Expect = 1e-20
 Identities = 46/74 (62%), Positives = 60/74 (81%)
 Frame = -3

Query: 223 NNLSRNLCKNGKTEELVEVYHILSSKDYFSNMERYNMMISFLCTAGRVKEAYAGIQEMKK 44
           +NL RNLCK+GK +EL+EVY +LSS +YFS+ME YN+M SFLC  GRV+EAY  +QEM+K
Sbjct: 367 SNLCRNLCKHGKIDELLEVYRVLSSNEYFSDMESYNVMFSFLCMGGRVREAYEVLQEMRK 426

Query: 43  KGFGPDVFSYNSVM 2
           KG  PD+  YNS++
Sbjct: 427 KGLDPDISMYNSLI 440


>ref|XP_002298642.1| predicted protein [Populus trichocarpa] gi|222845900|gb|EEE83447.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score =  103 bits (258), Expect = 1e-20
 Identities = 46/74 (62%), Positives = 60/74 (81%)
 Frame = -3

Query: 223 NNLSRNLCKNGKTEELVEVYHILSSKDYFSNMERYNMMISFLCTAGRVKEAYAGIQEMKK 44
           +NL RNLCK+GK +EL+EVY +LSS +YFS+ME YN+M SFLC  GRV+EAY  +QEM+K
Sbjct: 367 SNLCRNLCKHGKIDELLEVYRVLSSNEYFSDMESYNVMFSFLCMGGRVREAYEVLQEMRK 426

Query: 43  KGFGPDVFSYNSVM 2
           KG  PD+  YNS++
Sbjct: 427 KGLDPDISMYNSLI 440