BLASTX nr result

ID: Coptis23_contig00031143 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031143
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544249.1| PREDICTED: uncharacterized protein LOC100786...    60   1e-18
ref|XP_002277891.1| PREDICTED: uncharacterized protein LOC100256...    59   1e-18
ref|XP_003518266.1| PREDICTED: uncharacterized protein LOC100775...    57   1e-17
ref|XP_002524043.1| conserved hypothetical protein [Ricinus comm...    61   4e-17
emb|CBI38565.3| unnamed protein product [Vitis vinifera]               59   6e-17

>ref|XP_003544249.1| PREDICTED: uncharacterized protein LOC100786030 [Glycine max]
          Length = 720

 Score = 60.5 bits (145), Expect(2) = 1e-18
 Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
 Frame = +2

Query: 56  TAACPHNSRRIFLHHFGGELQEGS--EYSVLESSCLQHWFKNWKELRKNKLTAST 214
           T +C  N+    L   GG L+  S   YSVL++SCLQHWFKNW+ LR+NKLTAST
Sbjct: 62  TNSCGSNNPSRKLGSLGGMLKYTSVETYSVLQASCLQHWFKNWQALRRNKLTAST 116



 Score = 57.4 bits (137), Expect(2) = 1e-18
 Identities = 26/37 (70%), Positives = 29/37 (78%)
 Frame = +1

Query: 214 FAGAIGFWPGRRHQLWKEKIGAIDPFSRNLATIWGDI 324
           FA AIGFW  +R QLW EKIGAI+PFS NLAT W +I
Sbjct: 117 FAAAIGFWRRQRVQLWLEKIGAIEPFSGNLATCWSNI 153


>ref|XP_002277891.1| PREDICTED: uncharacterized protein LOC100256226 [Vitis vinifera]
          Length = 350

 Score = 58.9 bits (141), Expect(2) = 1e-18
 Identities = 31/56 (55%), Positives = 37/56 (66%), Gaps = 3/56 (5%)
 Frame = +2

Query: 65  CPHNSRRI---FLHHFGGELQEGSEYSVLESSCLQHWFKNWKELRKNKLTASTLLG 223
           C H+SR++   F H     L  G  YSVL+SS  QHWFKNW+E RK+KLTAST  G
Sbjct: 72  CSHSSRKVPVCFDH--SPNLLSGETYSVLQSSGFQHWFKNWQEQRKHKLTASTFGG 125



 Score = 58.9 bits (141), Expect(2) = 1e-18
 Identities = 25/37 (67%), Positives = 28/37 (75%)
 Frame = +1

Query: 214 FAGAIGFWPGRRHQLWKEKIGAIDPFSRNLATIWGDI 324
           F GA+GFWP RR QLW EK+GA  PFS NLAT W +I
Sbjct: 123 FGGAVGFWPRRRVQLWLEKLGATKPFSGNLATCWSNI 159


>ref|XP_003518266.1| PREDICTED: uncharacterized protein LOC100775211 [Glycine max]
          Length = 668

 Score = 57.4 bits (137), Expect(2) = 1e-17
 Identities = 28/43 (65%), Positives = 33/43 (76%), Gaps = 2/43 (4%)
 Frame = +2

Query: 92  LHHFGGELQEGS--EYSVLESSCLQHWFKNWKELRKNKLTAST 214
           L   GG L+  S   YSVL++SCLQHWFKNW+ LR+NKLTAST
Sbjct: 22  LGSLGGMLKYTSVETYSVLQASCLQHWFKNWQALRRNKLTAST 64



 Score = 57.4 bits (137), Expect(2) = 1e-17
 Identities = 26/37 (70%), Positives = 29/37 (78%)
 Frame = +1

Query: 214 FAGAIGFWPGRRHQLWKEKIGAIDPFSRNLATIWGDI 324
           FA AIGFW  +R QLW EKIGAI+PFS NLAT W +I
Sbjct: 65  FAAAIGFWHRQRVQLWLEKIGAIEPFSGNLATCWSNI 101


>ref|XP_002524043.1| conserved hypothetical protein [Ricinus communis]
           gi|223536770|gb|EEF38411.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 317

 Score = 60.8 bits (146), Expect(2) = 4e-17
 Identities = 27/37 (72%), Positives = 29/37 (78%)
 Frame = +1

Query: 214 FAGAIGFWPGRRHQLWKEKIGAIDPFSRNLATIWGDI 324
           F GAIGFW GRR QLW EK+GAI PFS NLAT W +I
Sbjct: 90  FGGAIGFWHGRRVQLWLEKLGAIKPFSGNLATCWSNI 126



 Score = 52.0 bits (123), Expect(2) = 4e-17
 Identities = 23/40 (57%), Positives = 28/40 (70%)
 Frame = +2

Query: 110 ELQEGSEYSVLESSCLQHWFKNWKELRKNKLTASTLLGLL 229
           E   G   S+L+S  LQHWFKNW+E RK+KLTAST  G +
Sbjct: 55  EFPTGETSSILQSRALQHWFKNWQEQRKHKLTASTFGGAI 94


>emb|CBI38565.3| unnamed protein product [Vitis vinifera]
          Length = 118

 Score = 58.9 bits (141), Expect(2) = 6e-17
 Identities = 25/37 (67%), Positives = 28/37 (75%)
 Frame = +1

Query: 214 FAGAIGFWPGRRHQLWKEKIGAIDPFSRNLATIWGDI 324
           F GA+GFWP RR QLW EK+GA  PFS NLAT W +I
Sbjct: 38  FGGAVGFWPRRRVQLWLEKLGATKPFSGNLATCWSNI 74



 Score = 53.1 bits (126), Expect(2) = 6e-17
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +2

Query: 122 GSEYSVLESSCLQHWFKNWKELRKNKLTASTLLG 223
           G  YSVL+SS  QHWFKNW+E RK+KLTAST  G
Sbjct: 7   GHTYSVLQSSGFQHWFKNWQEQRKHKLTASTFGG 40


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