BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031116
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    95   1e-17
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    93   4e-17
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    91   2e-16
ref|XP_002525835.1| conserved hypothetical protein [Ricinus comm...    89   6e-16
ref|XP_003629127.1| F-box family protein [Medicago truncatula] g...    88   1e-15

>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 95.1 bits (235), Expect = 1e-17
 Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 20/206 (9%)
 Frame = +1

Query: 85  QTKSMENLPAEVTQEILSRLPITSLFESRYVCQTWHGLINDRRLSFMHYVQACRRINPTT 264
           QT  ME LP E+ Q+ILSRLPITSL + + VC+ W  +  D  +  ++   + +  +P  
Sbjct: 21  QTTGMELLPREIAQDILSRLPITSLVKFKCVCRAWRAMALDPEVVNLYLSCSTQETDPCV 80

Query: 265 SLILYNGP---GLYYIPDFNTCE---NVVVFNNLPFKSWLPYFKVVGSQNGFICVAADGC 426
            ++  + P    LY++ DF   E     V     PF S +P F+VVGS NG +C+ +D  
Sbjct: 81  -ILHCDFPIRNNLYFV-DFAAHEEEKEKVKRIRAPFSSMMPEFEVVGSCNGLLCL-SDSL 137

Query: 427 SYRNIFICNPVIGEWFLVPRSETLYGTN--YGFGYELETNEYKIVRMRFCKDEDN----- 585
              +++I NP  G +  +P+S         +GFG+  +TNEYK++R+ + ++        
Sbjct: 138 FNDSLYIYNPFTGRYKELPKSLQYPDQEVVFGFGFNPKTNEYKVIRIVYYRNGHGRYPRS 197

Query: 586 -------YDVEIHKLGTSTWRDIGKV 642
                    V+I  LG   WR +GKV
Sbjct: 198 RRIIYPLSQVQILTLGCPGWRSLGKV 223


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 69/207 (33%), Positives = 104/207 (50%), Gaps = 21/207 (10%)
 Frame = +1

Query: 85  QTKSMENLPAEVTQEILSRLPITSLFESRYVCQTWHGLINDRRLSFMHYVQACRRINPTT 264
           QT  ME LP E+  +ILSRLPITSL + + VC+ W  L+ D +L  + Y+    +     
Sbjct: 21  QTTGMELLPREIAHDILSRLPITSLVQFKCVCRAWRALVQDPQLVDL-YLSCSTQDTDHP 79

Query: 265 SLILYNG----PGLYYIPDFNTCE---NVVVFNNLPFKSWLPYFKVVGSQNGFICVAADG 423
            LIL+        LY++ DF   E     V     PF S +P F+VVGS NG +C+ +D 
Sbjct: 80  CLILHCDFPIRNNLYFV-DFAAHEEEKEKVKRIPAPFSSMMPEFEVVGSCNGLLCL-SDS 137

Query: 424 CSYRNIFICNPVIGEWFLVPRSETLYGTNY--GFGYELETNEYKIVRMRFCKDEDN---- 585
               +++I NP  G +  +P+S          GFG+  +T EYK++R+ + ++       
Sbjct: 138 LYNDSLYIYNPFTGCYKELPKSLQYPDQEVVSGFGFNPKTKEYKVIRIVYYRNGHGGYPR 197

Query: 586 --------YDVEIHKLGTSTWRDIGKV 642
                    +V+I  LG   WR +GKV
Sbjct: 198 SRRIIYPLSEVQILTLGCPEWRSLGKV 224


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 20/206 (9%)
 Frame = +1

Query: 85  QTKSMENLPAEVTQEILSRLPITSLFESRYVCQTWHGLINDRRLSFMHYVQACRRINPTT 264
           +T  ME LP ++  +ILSRLP+TSL + R+VC+ W  +  D  L+  H    CR      
Sbjct: 23  RTSFMERLPRDIILDILSRLPVTSLVQFRFVCRGWRLMAQDSLLASKH---LCRTAQYNP 79

Query: 265 SLILY------NGPGLYYIPDFNTCENVVVFNNLPFKSWLPYFKVVGSQNGFICVAADGC 426
            LIL+      N      I   +  +++V    +PF + +P F+VVGS NG +C+ AD  
Sbjct: 80  CLILHCDYPIRNQISFVDISAESRDKDMVRKLTIPFWASMPEFEVVGSCNGLLCL-ADSL 138

Query: 427 SYRNIFICNPVIGEWFLVPRSETLYGTN--YGFGYELETNEYKIVRMRFCKDE------- 579
               +++ NP   ++  +P+S         +GFGY   T  YK+V++ + ++        
Sbjct: 139 FKDAVYVHNPFTRDFKQLPKSLQYPDQEVVFGFGYHPMTEVYKVVKVVYYRNGYGGFSRF 198

Query: 580 -----DNYDVEIHKLGTSTWRDIGKV 642
                   +V++  LG+ TWR +GKV
Sbjct: 199 RRITCSQSEVQVLTLGSPTWRSLGKV 224


>ref|XP_002525835.1| conserved hypothetical protein [Ricinus communis]
           gi|223534840|gb|EEF36529.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 371

 Score = 89.4 bits (220), Expect = 6e-16
 Identities = 61/191 (31%), Positives = 95/191 (49%), Gaps = 12/191 (6%)
 Frame = +1

Query: 97  MENLPAEVTQEILSRLPITSLFESRYVCQTWHGLINDRRLSFMHYVQACRRINPTTSLIL 276
           +EN+P E+  EIL RLP+ SL + R VCQ+WH LI +      H   +    N   S  L
Sbjct: 2   LENIPQEILIEILKRLPVKSLLKYRCVCQSWHSLITNSSFISTHINHSIECNNRVHSYAL 61

Query: 277 YNGPG--------LYYIPDFNTCENVVVFNNL--PFKSWLPYFKVVGSQNGFICVAADGC 426
                        + YI D +  E   V+  L  PFK    Y +++ S NG +C++    
Sbjct: 62  VKQKSVPDCKERFILYIDDDSGDEPFRVYQELDFPFKG-ERYLEIISSCNGLVCLS--DS 118

Query: 427 SYRNIFICNPVIGEWFLVPRSETLYGTNYGFGYELETNEYKIVRMRFCKDEDN--YDVEI 600
            Y   ++ NPVI +   +  S++ +    GFG+E + N+YK+V++    ++ N    V+I
Sbjct: 119 QYARFYLWNPVIRKCLTILSSDSSF--IVGFGFEYKKNDYKVVKIMHHPEKMNPVLIVKI 176

Query: 601 HKLGTSTWRDI 633
           + L TS WR I
Sbjct: 177 YDLSTSAWRSI 187


>ref|XP_003629127.1| F-box family protein [Medicago truncatula]
           gi|355523149|gb|AET03603.1| F-box family protein
           [Medicago truncatula]
          Length = 234

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 61/201 (30%), Positives = 101/201 (50%), Gaps = 10/201 (4%)
 Frame = +1

Query: 61  RRMSLNSLQTKSMENLPAEVTQEILSRLPITSLFESRYVCQTWHGLINDRRLSFMHYVQA 240
           R ++ +SL T  +  LP ++  +IL RLP+  L + + VC++W+ LI+D + +  H   +
Sbjct: 15  RTLTSSSLHTPPLPFLPFDLITDILCRLPVKFLIQFQCVCKSWNSLISDPKFAEKHCRLS 74

Query: 241 CRRINPTTSL-------ILYNGPGLYYIPDFNTCENVVVFNNLPFKSWLPYFKVVGSQNG 399
             R+  T +        IL + P      D  T +       L   S   YF  VGS NG
Sbjct: 75  TTRLVHTLTFSNLPYKHILKSYPLHSVFIDLTTNQTAHPITQLETPSKY-YFYFVGSCNG 133

Query: 400 FIC-VAADGCSYRNIFICNPVIGEWFLVPRSETLYGTNYGFGYELETNEYK-IVRMRFCK 573
            +C +A D   + +I + NP I ++  +P  +   G  YGFGY+  TN YK +V +R C 
Sbjct: 134 ILCLLACDYAGFVSIRLWNPSIRKFKELPYLQKQEGVMYGFGYDAVTNNYKVVVVLRACY 193

Query: 574 DEDN-YDVEIHKLGTSTWRDI 633
              N ++V ++ L T +W+ +
Sbjct: 194 SSGNSFEVNVYTLSTDSWKSL 214