BLASTX nr result

ID: Coptis23_contig00031096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031096
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326146.1| predicted protein [Populus trichocarpa] gi|2...   156   2e-36
emb|CBI27754.3| unnamed protein product [Vitis vinifera]              155   4e-36
ref|XP_002275046.1| PREDICTED: uncharacterized protein LOC100254...   155   4e-36
dbj|BAB86284.1| kinesin-like protein NACK2 [Nicotiana tabacum]        151   5e-35
ref|XP_002875601.1| hypothetical protein ARALYDRAFT_323079 [Arab...   147   7e-34

>ref|XP_002326146.1| predicted protein [Populus trichocarpa] gi|222833339|gb|EEE71816.1|
            predicted protein [Populus trichocarpa]
          Length = 952

 Score =  156 bits (394), Expect = 2e-36
 Identities = 69/92 (75%), Positives = 83/92 (90%)
 Frame = -1

Query: 325  SRLTPQELEMIYTKWEVPPGGKQRRLQLVNKLWTDPHNMQHVRDSAEVVAKLVGFCESKE 146
            S+LT  E EM+Y KWE+P GGKQRRLQLVNKLWTDP NMQH+++SAE+VAKLVGFCES E
Sbjct: 861  SKLTVDEREMLYVKWEIPQGGKQRRLQLVNKLWTDPLNMQHIKESAEIVAKLVGFCESGE 920

Query: 145  NASKEMFQLSFVSPCDKKSWMGWNLISNLLHL 50
            + SKEMF+L+F +PCDKK+WMGWNLIS+LL+L
Sbjct: 921  HVSKEMFELNFANPCDKKTWMGWNLISSLLNL 952


>emb|CBI27754.3| unnamed protein product [Vitis vinifera]
          Length = 942

 Score =  155 bits (391), Expect = 4e-36
 Identities = 69/93 (74%), Positives = 83/93 (89%)
 Frame = -1

Query: 328  ASRLTPQELEMIYTKWEVPPGGKQRRLQLVNKLWTDPHNMQHVRDSAEVVAKLVGFCESK 149
            +S+LT +E EM+Y KWE+P  GKQRRLQLVNKLWTDPHNM+H+++SAE+VAKLVGFCES 
Sbjct: 850  SSKLTEEEREMLYIKWEIPAVGKQRRLQLVNKLWTDPHNMEHIKESAEIVAKLVGFCESG 909

Query: 148  ENASKEMFQLSFVSPCDKKSWMGWNLISNLLHL 50
            E+ SKEMF+L+FVS  D+K WMGWNLISNLLHL
Sbjct: 910  EHVSKEMFELNFVSHSDRKPWMGWNLISNLLHL 942


>ref|XP_002275046.1| PREDICTED: uncharacterized protein LOC100254378 [Vitis vinifera]
          Length = 943

 Score =  155 bits (391), Expect = 4e-36
 Identities = 69/93 (74%), Positives = 83/93 (89%)
 Frame = -1

Query: 328  ASRLTPQELEMIYTKWEVPPGGKQRRLQLVNKLWTDPHNMQHVRDSAEVVAKLVGFCESK 149
            +S+LT +E EM+Y KWE+P  GKQRRLQLVNKLWTDPHNM+H+++SAE+VAKLVGFCES 
Sbjct: 851  SSKLTEEEREMLYIKWEIPAVGKQRRLQLVNKLWTDPHNMEHIKESAEIVAKLVGFCESG 910

Query: 148  ENASKEMFQLSFVSPCDKKSWMGWNLISNLLHL 50
            E+ SKEMF+L+FVS  D+K WMGWNLISNLLHL
Sbjct: 911  EHVSKEMFELNFVSHSDRKPWMGWNLISNLLHL 943


>dbj|BAB86284.1| kinesin-like protein NACK2 [Nicotiana tabacum]
          Length = 955

 Score =  151 bits (382), Expect = 5e-35
 Identities = 71/94 (75%), Positives = 84/94 (89%), Gaps = 1/94 (1%)
 Frame = -1

Query: 328  ASRLTPQELEMIYTKWEVPPGGKQRR-LQLVNKLWTDPHNMQHVRDSAEVVAKLVGFCES 152
            +S+L  +E EM+Y KW++PP GKQRR LQLVNKLW+DP NMQ+VRDSAEVVAKLVGFCE+
Sbjct: 862  SSKLNAEEREMLYVKWDIPPDGKQRRRLQLVNKLWSDPLNMQNVRDSAEVVAKLVGFCET 921

Query: 151  KENASKEMFQLSFVSPCDKKSWMGWNLISNLLHL 50
             E+ SKEMFQL+FVSP DKK+W+GWNLISNLLHL
Sbjct: 922  GEHVSKEMFQLNFVSPSDKKTWIGWNLISNLLHL 955


>ref|XP_002875601.1| hypothetical protein ARALYDRAFT_323079 [Arabidopsis lyrata subsp.
            lyrata] gi|297321439|gb|EFH51860.1| hypothetical protein
            ARALYDRAFT_323079 [Arabidopsis lyrata subsp. lyrata]
          Length = 942

 Score =  147 bits (372), Expect = 7e-34
 Identities = 67/93 (72%), Positives = 79/93 (84%), Gaps = 1/93 (1%)
 Frame = -1

Query: 325  SRLTPQELEMIYTKWEVPPGGKQRRLQLVNKLWTDPHNMQHVRDSAEVVAKLVGFCESKE 146
            ++L  +E EM+Y KW+VPP GKQRR Q +NKLWTDPHNMQHVR+SAE+VAKLVGFC+S E
Sbjct: 850  TKLGAEEREMLYLKWDVPPVGKQRRQQFINKLWTDPHNMQHVRESAEIVAKLVGFCDSGE 909

Query: 145  NASKEMFQLSFVSPCDKKSW-MGWNLISNLLHL 50
            N  KEMF+L+F SP DKK+W MGWN ISNLLHL
Sbjct: 910  NIRKEMFELNFASPSDKKTWMMGWNFISNLLHL 942


Top