BLASTX nr result

ID: Coptis23_contig00031090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031090
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526847.1| DELLA protein GAI1, putative [Ricinus commun...   130   9e-29
ref|XP_002327229.1| GRAS family transcription factor [Populus tr...   129   2e-28
ref|XP_002266212.1| PREDICTED: DELLA protein RGL2 [Vitis vinifera]    127   7e-28
ref|XP_002326001.1| GRAS family transcription factor [Populus tr...   121   5e-26
ref|XP_003518339.1| PREDICTED: DELLA protein GAI-like [Glycine max]   119   3e-25

>ref|XP_002526847.1| DELLA protein GAI1, putative [Ricinus communis]
           gi|223533851|gb|EEF35582.1| DELLA protein GAI1, putative
           [Ricinus communis]
          Length = 471

 Score =  130 bits (328), Expect = 9e-29
 Identities = 66/106 (62%), Positives = 83/106 (78%), Gaps = 8/106 (7%)
 Frame = -3

Query: 294 SAERLCIEKNHLGKEIKRMMNYEKDEEN----HQRLETWKGRLESKGFVSKKLSSRSVIQ 127
           S+ERL IEKNHLGKEIK M+NY+KD+ N    ++++ETWKGR+E+ GF   KLSS+S+IQ
Sbjct: 357 SSERLSIEKNHLGKEIKSMLNYDKDDLNCATRYEKMETWKGRMENHGFSGMKLSSKSLIQ 416

Query: 126 AKLLLKIRSHSSPVVYGG----GNGFRVLEREEGCALSLGWQDRFL 1
           AKLLLKIR+H SP  + G    G+GFRV ER+EG  +SLGWQDR L
Sbjct: 417 AKLLLKIRTHHSPPQFNGENSSGSGFRVFERDEGKTISLGWQDRCL 462


>ref|XP_002327229.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222835599|gb|EEE74034.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 463

 Score =  129 bits (325), Expect = 2e-28
 Identities = 64/103 (62%), Positives = 81/103 (78%), Gaps = 5/103 (4%)
 Frame = -3

Query: 294 SAERLCIEKNHLGKEIKRMMNYEKDEEN---HQRLETWKGRLESKGFVSKKLSSRSVIQA 124
           S+ERL IEKNHLGKEIK M+NY+KD+ N   + ++ETWKGR+E  GF   KLSS+S+IQA
Sbjct: 352 SSERLSIEKNHLGKEIKSMLNYDKDDANCPRYDKMETWKGRMEGHGFAGMKLSSKSLIQA 411

Query: 123 KLLLKIRSHSSPVVYGG--GNGFRVLEREEGCALSLGWQDRFL 1
           KLLLKIR+H  P+ + G  G GF+V ER++G A+SLGWQDR L
Sbjct: 412 KLLLKIRTHYCPLQFDGESGGGFKVFERDDGKAISLGWQDRCL 454


>ref|XP_002266212.1| PREDICTED: DELLA protein RGL2 [Vitis vinifera]
          Length = 455

 Score =  127 bits (320), Expect = 7e-28
 Identities = 65/102 (63%), Positives = 80/102 (78%), Gaps = 4/102 (3%)
 Frame = -3

Query: 294 SAERLCIEKNHLGKEIKRMMNYEKDEEN---HQRLETWKGRLESKGFVSKKLSSRSVIQA 124
           S ERL IEKNHLGKEIK M+NY+KD+ N   ++++ETWKGR+ES GF   KLSS+S+IQA
Sbjct: 345 SPERLSIEKNHLGKEIKSMLNYDKDDTNCPRYEKMETWKGRMESHGFTGIKLSSKSMIQA 404

Query: 123 KLLLKIRSHSSPVVYGG-GNGFRVLEREEGCALSLGWQDRFL 1
           KLLLKIRSH  P+ + G   GFRV ER++  A+SLGWQDR L
Sbjct: 405 KLLLKIRSHYCPLQFDGESGGFRVFERDDERAISLGWQDRCL 446


>ref|XP_002326001.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222862876|gb|EEF00383.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 463

 Score =  121 bits (304), Expect = 5e-26
 Identities = 60/103 (58%), Positives = 79/103 (76%), Gaps = 5/103 (4%)
 Frame = -3

Query: 294 SAERLCIEKNHLGKEIKRMMNYEKDEEN---HQRLETWKGRLESKGFVSKKLSSRSVIQA 124
           S+ERL IEKNHLGK+IKRM+N +KD+ N   + ++ETWKGR+E  GF   KLSS+S+IQA
Sbjct: 351 SSERLSIEKNHLGKDIKRMLNCDKDDANCPRYDKMETWKGRMEGHGFAGIKLSSKSLIQA 410

Query: 123 KLLLKIRSHSSPVVYGGG--NGFRVLEREEGCALSLGWQDRFL 1
           KLLLKIR+H  P+ + G     F+V ER++G  +SLGWQDR+L
Sbjct: 411 KLLLKIRTHYCPLQFDGDFCGXFKVFERDDGKGISLGWQDRYL 453


>ref|XP_003518339.1| PREDICTED: DELLA protein GAI-like [Glycine max]
          Length = 476

 Score =  119 bits (297), Expect = 3e-25
 Identities = 61/106 (57%), Positives = 79/106 (74%), Gaps = 8/106 (7%)
 Frame = -3

Query: 294 SAERLCIEKNHLGKEIKRMMNYEKDE------ENHQRLETWKGRLESKGFVSKKLSSRSV 133
           S ERL IEK  LGKEIK M+NY+ D+        ++R+ETWKGR+E+ GFV +K+SS+ V
Sbjct: 362 STERLRIEKQLLGKEIKSMLNYDMDDGVEYYCPKYERMETWKGRMENHGFVGRKISSKCV 421

Query: 132 IQAKLLLKIRSHSSPVVY--GGGNGFRVLEREEGCALSLGWQDRFL 1
           IQAKLLLK+R+H  P+ +   GG GFRV ER+EG  +SLGWQ+RFL
Sbjct: 422 IQAKLLLKMRTHYYPLQFEEEGGGGFRVSERDEGRVISLGWQNRFL 467


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