BLASTX nr result

ID: Coptis23_contig00031077 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031077
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310566.1| predicted protein [Populus trichocarpa] gi|2...   167   2e-39
emb|CAN82837.1| hypothetical protein VITISV_030872 [Vitis vinifera]   150   1e-34
ref|XP_002531252.1| conserved hypothetical protein [Ricinus comm...   149   3e-34
ref|XP_002307089.1| predicted protein [Populus trichocarpa] gi|2...   146   3e-33
gb|AFK40931.1| unknown [Lotus japonicus]                              111   1e-22

>ref|XP_002310566.1| predicted protein [Populus trichocarpa] gi|222853469|gb|EEE91016.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score =  167 bits (422), Expect = 2e-39
 Identities = 85/170 (50%), Positives = 110/170 (64%), Gaps = 3/170 (1%)
 Frame = +2

Query: 80  LSSLNCNLKIIRAKNVEFVSVGNLFVRYYLLTEKDTRIRLTSRDIPSTCEPCWNESITFE 259
           ++ L+C ++I++AKNVEF S G+LFVRYYL T    RI+L SR+I +     WNES + E
Sbjct: 1   MTCLSCEIEILQAKNVEFKSHGSLFVRYYLSTGNSKRIQLNSREISAKANLFWNESFSLE 60

Query: 260 CLGDKDVINKLTQQSVVFELRWRKAASAFGKFGGSKLLFRAEVRWKDVLESAEISIEKWI 439
           C G +D IN L QQ+VVFELRWR      GK GGS+LL RAEV WK V+ES ++ +E+W+
Sbjct: 61  CSGTEDSINNLKQQTVVFELRWRSTNPILGKIGGSQLLGRAEVPWKTVVESPKLEMERWV 120

Query: 440 TSATTSKFVPEGFKPPALQIEMRVDQKA---FHMPKRCQVRSTKWNECGC 580
           T       VP+  KPPA+QI MRV   A       KR   R  +W+ECGC
Sbjct: 121 TMIPKKGSVPDDVKPPAVQIAMRVRVPAMAEMQEKKRRNGRLKRWDECGC 170


>emb|CAN82837.1| hypothetical protein VITISV_030872 [Vitis vinifera]
          Length = 194

 Score =  150 bits (380), Expect = 1e-34
 Identities = 79/176 (44%), Positives = 110/176 (62%), Gaps = 3/176 (1%)
 Frame = +2

Query: 62  MGATQNLSSLNCNLKIIRAKNVEFVSVGNLFVRYYLLTEKDTRIRLTSRDIPSTCEPCWN 241
           MGA+Q LSSL+C ++I+RAKN+E  + G LFVRYYL    + R+ L SR+I S  +  W+
Sbjct: 1   MGASQCLSSLSCEIRIMRAKNIELKTEGKLFVRYYLSAGNNQRVGLNSREISSKSDLFWD 60

Query: 242 ESITFECLGDKDVINKLTQQSVVFELRWRKAASAFGKFGGSKLLFRAEVRWKDVLESAEI 421
           ES + ECLG ++ I  L Q+ VVFELRWR      G+   S +L R E+ W  V  S E+
Sbjct: 61  ESFSLECLGSEESIQSLMQERVVFELRWRSKVPVLGRVRKSHVLGRVEIPWTSVFASKEM 120

Query: 422 SIEKWITSATT-SKFVPEGFKPPALQIEMRVDQKAFHMPKRCQ--VRSTKWNECGC 580
            IEKW++  +T S+ V +  +PPALQ+ M+V      +PK  +   R  KW+ECGC
Sbjct: 121 EIEKWVSMVSTGSRVVDQDGQPPALQVAMKV-----RIPKVAERSRRVMKWDECGC 171


>ref|XP_002531252.1| conserved hypothetical protein [Ricinus communis]
           gi|223529137|gb|EEF31116.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 198

 Score =  149 bits (376), Expect = 3e-34
 Identities = 76/169 (44%), Positives = 108/169 (63%), Gaps = 4/169 (2%)
 Frame = +2

Query: 86  SLNCNLKIIRAKNVEFVSVGNLFVRYYLLTEKDTRIRLTSRDIPSTCEPCWNESITFECL 265
           SL+C + I++AKN+E  S GNLFVRYYL +  + RI++ +++I S  +  WNE  + ECL
Sbjct: 7   SLSCEISIVQAKNLELKSHGNLFVRYYLSSGHNKRIQINTQEISSKSDLFWNEFFSLECL 66

Query: 266 GDKDVINKLTQQSVVFELRWRKAASAFGKFGGSKLLFRAEVRWKDVLESAEISIEKWI-- 439
           G +D IN L Q+SVVFELRWR   S  GK GGS+LL RA++ WK VLES ++ IEKW+  
Sbjct: 67  GTQDSINNLKQESVVFELRWRNTKSILGKIGGSQLLGRAKIPWKTVLESPKMEIEKWVMM 126

Query: 440 TSATTSKFVPEGFKPPALQIEMRVDQKAFHMPKRCQVRSTKW--NECGC 580
            S      + +  KPP++QI +RV        ++   +  KW  ++CGC
Sbjct: 127 VSKKNCSVLADDVKPPSVQIALRVRVPEMVAMEKRNGKLRKWENDDCGC 175


>ref|XP_002307089.1| predicted protein [Populus trichocarpa] gi|222856538|gb|EEE94085.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  146 bits (368), Expect = 3e-33
 Identities = 79/176 (44%), Positives = 104/176 (59%), Gaps = 5/176 (2%)
 Frame = +2

Query: 68  ATQNLSS--LNCNLKIIRAKNVEFVSVGNLFVRYYLLTEKDTRIRLTSRDIPSTCEPCWN 241
           AT+ ++S  L   ++I +AKN+E  S G+LFVRYYL   K+ RI+L SR+I S     WN
Sbjct: 4   ATEGIASTCLGIEIEIFQAKNIEVKSHGSLFVRYYLSAGKNKRIQLKSREISSKSNLFWN 63

Query: 242 ESITFECLGDKDVINKLTQQSVVFELRWRKAASAFGKFGGSKLLFRAEVRWKDVLESAEI 421
           ES + EC+G +D IN L Q++VVFELRWR       K GGS+LL RAEV WK VLES  +
Sbjct: 64  ESFSLECIGTEDSINNLKQETVVFELRWRNTNPILAKIGGSQLLGRAEVPWKTVLESPNL 123

Query: 422 SIEKWITSATTSKFVPEGFKPPALQIEMRV---DQKAFHMPKRCQVRSTKWNECGC 580
            +E W+        VP+  KPP++QI MR    +        R   R  K + CGC
Sbjct: 124 EMESWVMMVPKKGSVPDDVKPPSVQIAMRARVPEMAEMEKKNRRDGRLRKRDGCGC 179


>gb|AFK40931.1| unknown [Lotus japonicus]
          Length = 197

 Score =  111 bits (277), Expect = 1e-22
 Identities = 59/171 (34%), Positives = 93/171 (54%), Gaps = 3/171 (1%)
 Frame = +2

Query: 80  LSSLNCNLKIIRAKNVEFVSVGNLFVRYYLLT-EKDTRIRLTSRDIPSTCEPCWNESITF 256
           L S +C ++II A+NV      NLF R YL   +  + I+L S+ + S   PCWNES + 
Sbjct: 3   LQSFSCEIRIIEAQNVGITK--NLFARLYLPAGDNKSSIQLNSKMVSSKSNPCWNESFSL 60

Query: 257 ECLGDKDVINKLTQQSVVFELRWRKAASAFGK--FGGSKLLFRAEVRWKDVLESAEISIE 430
           +C   ++ +  L ++S+V ELR   AA+   +  FGGS+L+ R E+ WK +LES  +  +
Sbjct: 61  DCSCPEEFLETLQKESLVLELRQSSAATKVLRRIFGGSRLVGRGEIPWKTILESQNMEFK 120

Query: 431 KWITSATTSKFVPEGFKPPALQIEMRVDQKAFHMPKRCQVRSTKWNECGCR 583
           +W+   +        F  P +Q+E+++   A         R  KWNECGC+
Sbjct: 121 EWVKIDSCDGDSSTTFSVPEVQVEIKIKVVASEKKDNSSKRLNKWNECGCK 171


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