BLASTX nr result

ID: Coptis23_contig00031068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031068
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264396.1| PREDICTED: anaphase-promoting complex subuni...   132   4e-29
dbj|BAM64819.1| hypothetical protein [Beta vulgaris]                  129   2e-28
ref|XP_004149610.1| PREDICTED: anaphase-promoting complex subuni...   129   3e-28
ref|XP_002334539.1| predicted protein [Populus trichocarpa] gi|2...   128   6e-28
emb|CBH19893.1| cell division control 20 [Solanum lycopersicum v...   127   7e-28

>ref|XP_002264396.1| PREDICTED: anaphase-promoting complex subunit cdc20 [Vitis
           vinifera] gi|147796362|emb|CAN70390.1| hypothetical
           protein VITISV_013663 [Vitis vinifera]
           gi|296088759|emb|CBI38209.3| unnamed protein product
           [Vitis vinifera]
          Length = 450

 Score =  132 bits (331), Expect = 4e-29
 Identities = 63/87 (72%), Positives = 72/87 (82%)
 Frame = +1

Query: 1   ILSTGGMDSVMTVITNNDVRISNHIVEKYEGHQLEVCGLNWSSSGQQLASGGNDNLLHTC 180
           +L+TGGMD     I NNDVR+ +HIVE Y GH+ EVCGL WS+SGQQLASGGNDNLLH  
Sbjct: 230 VLTTGGMDGK---IINNDVRVRSHIVETYRGHRQEVCGLKWSASGQQLASGGNDNLLHIW 286

Query: 181 DHSMASSNSPTQWLHRLDNHTAAVKAL 261
           D S ASSNSPTQWLHR+++HTAAVKAL
Sbjct: 287 DRSSASSNSPTQWLHRMEDHTAAVKAL 313


>dbj|BAM64819.1| hypothetical protein [Beta vulgaris]
          Length = 610

 Score =  129 bits (325), Expect = 2e-28
 Identities = 63/87 (72%), Positives = 71/87 (81%)
 Frame = +1

Query: 1   ILSTGGMDSVMTVITNNDVRISNHIVEKYEGHQLEVCGLNWSSSGQQLASGGNDNLLHTC 180
           IL+TG MD     I NNDVRI +H+VE Y GHQ EVCGL WS+SGQQLASGGNDN+LH  
Sbjct: 391 ILTTGSMDGK---IINNDVRIRDHVVETYRGHQQEVCGLKWSASGQQLASGGNDNILHIW 447

Query: 181 DHSMASSNSPTQWLHRLDNHTAAVKAL 261
           D S+ASSNS TQWLHRL++HTAAVKAL
Sbjct: 448 DRSLASSNSATQWLHRLEDHTAAVKAL 474


>ref|XP_004149610.1| PREDICTED: anaphase-promoting complex subunit cdc20-like [Cucumis
           sativus] gi|449527067|ref|XP_004170534.1| PREDICTED:
           anaphase-promoting complex subunit cdc20-like [Cucumis
           sativus]
          Length = 453

 Score =  129 bits (323), Expect = 3e-28
 Identities = 64/87 (73%), Positives = 70/87 (80%)
 Frame = +1

Query: 1   ILSTGGMDSVMTVITNNDVRISNHIVEKYEGHQLEVCGLNWSSSGQQLASGGNDNLLHTC 180
           IL+TGGMD     I NNDVRI +HIVE Y GH  EVCGL WS SGQQLASGGNDN+LH  
Sbjct: 233 ILTTGGMDGK---ILNNDVRIRDHIVETYRGHDQEVCGLKWSLSGQQLASGGNDNVLHIW 289

Query: 181 DHSMASSNSPTQWLHRLDNHTAAVKAL 261
           D SMASSNS TQWLHRL++HT+AVKAL
Sbjct: 290 DRSMASSNSATQWLHRLEDHTSAVKAL 316


>ref|XP_002334539.1| predicted protein [Populus trichocarpa] gi|222873027|gb|EEF10158.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score =  128 bits (321), Expect = 6e-28
 Identities = 62/87 (71%), Positives = 70/87 (80%)
 Frame = +1

Query: 1   ILSTGGMDSVMTVITNNDVRISNHIVEKYEGHQLEVCGLNWSSSGQQLASGGNDNLLHTC 180
           IL+TGGMD     I NNDVRI +HIVE Y GHQ EVCGL WS+SGQQLASGGNDN++H  
Sbjct: 240 ILTTGGMDGK---IINNDVRIRSHIVETYRGHQQEVCGLKWSASGQQLASGGNDNIIHIW 296

Query: 181 DHSMASSNSPTQWLHRLDNHTAAVKAL 261
           D S+ASSNS TQW HRL+ HT+AVKAL
Sbjct: 297 DRSVASSNSATQWFHRLEEHTSAVKAL 323


>emb|CBH19893.1| cell division control 20 [Solanum lycopersicum var. cerasiforme]
          Length = 453

 Score =  127 bits (320), Expect = 7e-28
 Identities = 64/87 (73%), Positives = 70/87 (80%)
 Frame = +1

Query: 1   ILSTGGMDSVMTVITNNDVRISNHIVEKYEGHQLEVCGLNWSSSGQQLASGGNDNLLHTC 180
           IL+TGGMD     I NNDVRI N IV+ Y+GH  EVCGL WS+SGQQLASGGNDNLLH  
Sbjct: 233 ILTTGGMDGQ---IINNDVRIRNPIVDTYQGHHQEVCGLKWSASGQQLASGGNDNLLHIW 289

Query: 181 DHSMASSNSPTQWLHRLDNHTAAVKAL 261
           D S ASSNS TQWLHRL++HTAAVKAL
Sbjct: 290 DRSTASSNSTTQWLHRLEDHTAAVKAL 316


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