BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031047
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]    75   5e-19
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...    75   3e-18
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]    72   1e-17
emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]    65   1e-16
gb|ABW74566.1| integrase [Boechera divaricarpa]                        72   8e-16

>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
          Length = 1430

 Score = 75.1 bits (183), Expect(2) = 5e-19
 Identities = 33/55 (60%), Positives = 46/55 (83%)
 Frame = -3

Query: 239  IICVYMDDIIYTGSSSTLIKEFKENMMREFDVSDLGLSHYFLGLQVWQTDDSIFM 75
            IIC+Y+DD+IY GSSS+LI EFK  M ++F++SDLGL H+FLGL+V Q +D +F+
Sbjct: 1109 IICLYVDDMIYMGSSSSLINEFKACMKKKFEMSDLGLLHFFLGLEVKQVEDGVFV 1163



 Score = 43.9 bits (102), Expect(2) = 5e-19
 Identities = 19/27 (70%), Positives = 22/27 (81%)
 Frame = -2

Query: 84   YIYDLLKKFNMLNCKTSSTPMNASEKL 4
            Y  DLLKKFNMLNCK  + PMN++EKL
Sbjct: 1168 YAVDLLKKFNMLNCKVVAIPMNSNEKL 1194


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score = 74.7 bits (182), Expect(2) = 3e-18
 Identities = 32/55 (58%), Positives = 44/55 (80%)
 Frame = -3

Query: 239  IICVYMDDIIYTGSSSTLIKEFKENMMREFDVSDLGLSHYFLGLQVWQTDDSIFM 75
            ++C+Y+DD+IY GSS +L+ +FK NMMR F++SDLGL  YFLGL+V Q  D IF+
Sbjct: 1009 LVCLYVDDMIYIGSSKSLVNDFKSNMMRNFEMSDLGLLKYFLGLEVIQDKDGIFI 1063



 Score = 41.6 bits (96), Expect(2) = 3e-18
 Identities = 17/27 (62%), Positives = 22/27 (81%)
 Frame = -2

Query: 84   YIYDLLKKFNMLNCKTSSTPMNASEKL 4
            Y  DLLKKF M+NC+ ++TPMN +EKL
Sbjct: 1068 YAEDLLKKFQMMNCEVATTPMNINEKL 1094


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score = 71.6 bits (174), Expect(2) = 1e-17
 Identities = 31/55 (56%), Positives = 45/55 (81%)
 Frame = -3

Query: 239  IICVYMDDIIYTGSSSTLIKEFKENMMREFDVSDLGLSHYFLGLQVWQTDDSIFM 75
            IIC+Y+DD+IY GSSS+LI EFK  M ++F++S+LGL H+FL L+V Q +D +F+
Sbjct: 938  IICLYVDDMIYMGSSSSLINEFKACMKKKFEMSBLGLLHFFLXLEVKQVEDGVFV 992



 Score = 43.1 bits (100), Expect(2) = 1e-17
 Identities = 19/27 (70%), Positives = 22/27 (81%)
 Frame = -2

Query: 84   YIYDLLKKFNMLNCKTSSTPMNASEKL 4
            Y  DLLKKFNMLNCK  +T MN++EKL
Sbjct: 997  YXVDLLKKFNMLNCKVVATXMNSNEKL 1023


>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
          Length = 1183

 Score = 65.1 bits (157), Expect(2) = 1e-16
 Identities = 29/49 (59%), Positives = 40/49 (81%)
 Frame = -3

Query: 221  DDIIYTGSSSTLIKEFKENMMREFDVSDLGLSHYFLGLQVWQTDDSIFM 75
            DD+IY GSSS+LI EFK  M ++F++SDLGL H+FLGL+V Q +D +F+
Sbjct: 864  DDMIYMGSSSSLINEFKACMKKKFEMSDLGLLHFFLGLEVKQVEDGVFV 912



 Score = 46.2 bits (108), Expect(2) = 1e-16
 Identities = 20/27 (74%), Positives = 23/27 (85%)
 Frame = -2

Query: 84  YIYDLLKKFNMLNCKTSSTPMNASEKL 4
           Y  DLLKKFNMLNCK  +TPMN++EKL
Sbjct: 917 YAVDLLKKFNMLNCKVVATPMNSNEKL 943


>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score = 72.4 bits (176), Expect(2) = 8e-16
 Identities = 28/55 (50%), Positives = 47/55 (85%)
 Frame = -3

Query: 239  IICVYMDDIIYTGSSSTLIKEFKENMMREFDVSDLGLSHYFLGLQVWQTDDSIFM 75
            ++C+Y+DD+IY GSS++L+ EFK +MM +F+++DLGL ++FLGL+V Q +D +F+
Sbjct: 840  VVCLYVDDMIYMGSSASLVSEFKASMMEKFEMTDLGLLYFFLGLEVKQVEDGVFV 894



 Score = 35.8 bits (81), Expect(2) = 8e-16
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = -2

Query: 84  YIYDLLKKFNMLNCKTSSTPMNASEKL 4
           Y  DLLK+F+M  C    TPMN +EKL
Sbjct: 899 YACDLLKRFDMAGCNAVETPMNVNEKL 925