BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031035
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-li...    89   3e-16
ref|XP_002893127.1| hypothetical protein ARALYDRAFT_889526 [Arab...    84   2e-14
ref|NP_173495.5| RAD3-like DNA-binding helicase protein [Arabido...    84   2e-14
ref|XP_002893128.1| hypothetical protein ARALYDRAFT_472311 [Arab...    82   3e-14
ref|NP_173498.3| RAD3-like DNA-binding helicase protein [Arabido...    79   5e-13

>ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-like [Vitis vinifera]
          Length = 1255

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 45/80 (56%), Positives = 55/80 (68%)
 Frame = -1

Query: 240 LKDYYDSIRQGNGSAAWXXXXXXXXXXXQSDVKETQQDPPRGGSAFLAVCRGKVSEGMDF 61
           LK YY+S+R+G                 QSD KE+Q +  + G+AFLAV RGKVSEG+DF
Sbjct: 604 LKAYYESVRRGTKPTLGRKRRTKKMDLSQSDEKESQDNSKKKGAAFLAVFRGKVSEGIDF 663

Query: 60  SDENARVVVIVGIPFPNIHD 1
           SDENAR V+IVGIPFPN+HD
Sbjct: 664 SDENARAVIIVGIPFPNVHD 683


>ref|XP_002893127.1| hypothetical protein ARALYDRAFT_889526 [Arabidopsis lyrata subsp.
           lyrata] gi|297338969|gb|EFH69386.1| hypothetical protein
           ARALYDRAFT_889526 [Arabidopsis lyrata subsp. lyrata]
          Length = 1171

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 43/80 (53%), Positives = 51/80 (63%)
 Frame = -1

Query: 240 LKDYYDSIRQGNGSAAWXXXXXXXXXXXQSDVKETQQDPPRGGSAFLAVCRGKVSEGMDF 61
           LK YYDSIR  N                   +K   QD  + G+AFLAVCRGKVSEG+DF
Sbjct: 610 LKGYYDSIRGKNKLVG-----RNRRAKKAGPIKTETQDDSKKGAAFLAVCRGKVSEGIDF 664

Query: 60  SDENARVVVIVGIPFPNIHD 1
           +D+NAR V+IVGIPFPN+HD
Sbjct: 665 ADDNARAVIIVGIPFPNLHD 684


>ref|NP_173495.5| RAD3-like DNA-binding helicase protein [Arabidopsis thaliana]
           gi|332191893|gb|AEE30014.1| RAD3-like DNA-binding
           helicase protein [Arabidopsis thaliana]
          Length = 1175

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 43/80 (53%), Positives = 51/80 (63%)
 Frame = -1

Query: 240 LKDYYDSIRQGNGSAAWXXXXXXXXXXXQSDVKETQQDPPRGGSAFLAVCRGKVSEGMDF 61
           LK YYDSIR  N                   +K   QD  + G+AFLAVCRGKVSEG+DF
Sbjct: 615 LKGYYDSIRGKN-----KIIGRNRRAKKAGPIKTETQDDSKKGAAFLAVCRGKVSEGIDF 669

Query: 60  SDENARVVVIVGIPFPNIHD 1
           +D+NAR V+IVGIPFPN+HD
Sbjct: 670 ADDNARAVIIVGIPFPNLHD 689


>ref|XP_002893128.1| hypothetical protein ARALYDRAFT_472311 [Arabidopsis lyrata subsp.
           lyrata] gi|297338970|gb|EFH69387.1| hypothetical protein
           ARALYDRAFT_472311 [Arabidopsis lyrata subsp. lyrata]
          Length = 1138

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 46/80 (57%), Positives = 52/80 (65%)
 Frame = -1

Query: 240 LKDYYDSIRQGNGSAAWXXXXXXXXXXXQSDVKETQQDPPRGGSAFLAVCRGKVSEGMDF 61
           LK+YYDSI   N S               S + E Q D  RG SAFLAVCRGKVSEG+DF
Sbjct: 588 LKEYYDSISGNNRSNG----RNSRVKKAGSVITEAQDDSKRG-SAFLAVCRGKVSEGLDF 642

Query: 60  SDENARVVVIVGIPFPNIHD 1
           SD+NAR V+IVGIPFPN+ D
Sbjct: 643 SDDNARAVIIVGIPFPNLGD 662


>ref|NP_173498.3| RAD3-like DNA-binding helicase protein [Arabidopsis thaliana]
           gi|332191897|gb|AEE30018.1| RAD3-like DNA-binding
           helicase protein [Arabidopsis thaliana]
          Length = 1144

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 45/80 (56%), Positives = 50/80 (62%)
 Frame = -1

Query: 240 LKDYYDSIRQGNGSAAWXXXXXXXXXXXQSDVKETQQDPPRGGSAFLAVCRGKVSEGMDF 61
           LK+YYDSI   N                 S + E Q D  RG SAFLAVCRGKVSEGMDF
Sbjct: 551 LKEYYDSISGKNRLIG----RNSSVKKAGSVITEAQDDSKRG-SAFLAVCRGKVSEGMDF 605

Query: 60  SDENARVVVIVGIPFPNIHD 1
           SD+NAR V+IVGIP PN+ D
Sbjct: 606 SDDNARAVIIVGIPLPNLGD 625