BLASTX nr result

ID: Coptis23_contig00031018 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031018
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283205.1| PREDICTED: uncharacterized protein LOC100247...    58   7e-07

>ref|XP_002283205.1| PREDICTED: uncharacterized protein LOC100247266 [Vitis vinifera]
           gi|302143518|emb|CBI22079.3| unnamed protein product
           [Vitis vinifera]
          Length = 505

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 36/105 (34%), Positives = 50/105 (47%), Gaps = 7/105 (6%)
 Frame = +3

Query: 42  VNNSLRSPGNTGVESPDTDGRTSSYPSDNDSLFLTPELPALTNQCKNKAVRFECESNTVY 221
           ++N   S   + V + D        P D+    ++P L A   Q +N++VRFECE++   
Sbjct: 179 ISNGQSSTEGSTVGNSDVVINVHPNPVDDSVPSVSPWLSAPNVQRRNRSVRFECEADAAL 238

Query: 222 LPSSGTSE-------KQTNSPGRHLELKDCPYPTPLVLTDEMQTP 335
             S   S        K+  SP  H   K  PYPTPL L DE+QTP
Sbjct: 239 FSSGSASSEIASQTSKRYESPSNHSVSKLSPYPTPLKLNDELQTP 283


Top