BLASTX nr result

ID: Coptis23_contig00031008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031008
         (814 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315537.1| predicted protein [Populus trichocarpa] gi|2...   250   3e-64
dbj|BAE99816.1| hypothetical protein [Arabidopsis thaliana]           250   3e-64
ref|NP_568368.1| Mo25-like protein [Arabidopsis thaliana] gi|215...   250   3e-64
ref|XP_002871851.1| Mo25 family protein [Arabidopsis lyrata subs...   248   1e-63
ref|XP_002516814.1| structural constituent of ribosome, putative...   248   1e-63

>ref|XP_002315537.1| predicted protein [Populus trichocarpa] gi|222864577|gb|EEF01708.1|
           predicted protein [Populus trichocarpa]
          Length = 345

 Score =  250 bits (638), Expect = 3e-64
 Identities = 127/165 (76%), Positives = 139/165 (84%)
 Frame = +1

Query: 1   IKFPSLAKYILNSTSFELFFKYVELPNFDVASDAFATFKDLLTRHETAASEFLTARYVEF 180
           IKFP+LAKYIL S SFELFFK+VELPNFDVASDAF+TFKDLLT+H T  +E+LTA Y EF
Sbjct: 154 IKFPTLAKYILESASFELFFKFVELPNFDVASDAFSTFKDLLTKHGTVVAEYLTAHYDEF 213

Query: 181 FELYEKLLTSANYVTRRQXXXXXXXXXXXXPNSHIMKRYILEVHHLKVMMTLLKDSSKNI 360
           F+ YEKLLTS+NYVTRRQ            P+SHIMKRYI EV +LKVMMTLLKDSSKNI
Sbjct: 214 FDQYEKLLTSSNYVTRRQSLKLLSEFLLEPPSSHIMKRYIQEVRYLKVMMTLLKDSSKNI 273

Query: 361 QISAFHIFKVFVANPNKPQEIIVILAKNHEKLLALLHNLSVGKGA 495
           QISAFHIFKVFVANPNKP+E+ VILAKNH KLL LLHNLS GKGA
Sbjct: 274 QISAFHIFKVFVANPNKPREVKVILAKNHGKLLELLHNLSAGKGA 318


>dbj|BAE99816.1| hypothetical protein [Arabidopsis thaliana]
          Length = 345

 Score =  250 bits (638), Expect = 3e-64
 Identities = 122/165 (73%), Positives = 142/165 (86%)
 Frame = +1

Query: 1   IKFPSLAKYILNSTSFELFFKYVELPNFDVASDAFATFKDLLTRHETAASEFLTARYVEF 180
           IKFPSLAKYIL S  FELFFK+VELPNFDVASDAF+TFKDLLT+H++  SEFLT+ Y EF
Sbjct: 154 IKFPSLAKYILESACFELFFKFVELPNFDVASDAFSTFKDLLTKHDSVVSEFLTSHYTEF 213

Query: 181 FELYEKLLTSANYVTRRQXXXXXXXXXXXXPNSHIMKRYILEVHHLKVMMTLLKDSSKNI 360
           F++YE+LLTS+NYVTRRQ            PNSHIMK++ILEV +LKV+MTLLKDSSKNI
Sbjct: 214 FDVYERLLTSSNYVTRRQSLKLLSDFLLEPPNSHIMKKFILEVRYLKVIMTLLKDSSKNI 273

Query: 361 QISAFHIFKVFVANPNKPQEIIVILAKNHEKLLALLHNLSVGKGA 495
           QISAFHIFK+FVANPNKPQE+ +ILA+NHEKLL LLH+LS GKG+
Sbjct: 274 QISAFHIFKIFVANPNKPQEVKIILARNHEKLLELLHDLSPGKGS 318


>ref|NP_568368.1| Mo25-like protein [Arabidopsis thaliana] gi|21593944|gb|AAM65898.1|
           unknown [Arabidopsis thaliana]
           gi|124301170|gb|ABN04837.1| At5g18940 [Arabidopsis
           thaliana] gi|332005248|gb|AED92631.1| Mo25-like protein
           [Arabidopsis thaliana]
          Length = 345

 Score =  250 bits (638), Expect = 3e-64
 Identities = 122/165 (73%), Positives = 142/165 (86%)
 Frame = +1

Query: 1   IKFPSLAKYILNSTSFELFFKYVELPNFDVASDAFATFKDLLTRHETAASEFLTARYVEF 180
           IKFPSLAKYIL S  FELFFK+VELPNFDVASDAF+TFKDLLT+H++  SEFLT+ Y EF
Sbjct: 154 IKFPSLAKYILESACFELFFKFVELPNFDVASDAFSTFKDLLTKHDSVVSEFLTSHYTEF 213

Query: 181 FELYEKLLTSANYVTRRQXXXXXXXXXXXXPNSHIMKRYILEVHHLKVMMTLLKDSSKNI 360
           F++YE+LLTS+NYVTRRQ            PNSHIMK++ILEV +LKV+MTLLKDSSKNI
Sbjct: 214 FDVYERLLTSSNYVTRRQSLKLLSDFLLEPPNSHIMKKFILEVRYLKVIMTLLKDSSKNI 273

Query: 361 QISAFHIFKVFVANPNKPQEIIVILAKNHEKLLALLHNLSVGKGA 495
           QISAFHIFK+FVANPNKPQE+ +ILA+NHEKLL LLH+LS GKG+
Sbjct: 274 QISAFHIFKIFVANPNKPQEVKIILARNHEKLLELLHDLSPGKGS 318


>ref|XP_002871851.1| Mo25 family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297317688|gb|EFH48110.1| Mo25 family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 345

 Score =  248 bits (633), Expect = 1e-63
 Identities = 121/165 (73%), Positives = 142/165 (86%)
 Frame = +1

Query: 1   IKFPSLAKYILNSTSFELFFKYVELPNFDVASDAFATFKDLLTRHETAASEFLTARYVEF 180
           IKFPSLAKYIL S  FELFFK+VELPNFDVASDAF+TFKDLLT+H++  SEFLT+ Y EF
Sbjct: 154 IKFPSLAKYILESACFELFFKFVELPNFDVASDAFSTFKDLLTKHDSVVSEFLTSHYSEF 213

Query: 181 FELYEKLLTSANYVTRRQXXXXXXXXXXXXPNSHIMKRYILEVHHLKVMMTLLKDSSKNI 360
           F++YE+LLTS+NYVTRRQ            PNSHIMK++ILEV +LKV+MTLLKDSSKNI
Sbjct: 214 FDVYERLLTSSNYVTRRQSLKLLSDFLLEPPNSHIMKKFILEVRYLKVIMTLLKDSSKNI 273

Query: 361 QISAFHIFKVFVANPNKPQEIIVILAKNHEKLLALLHNLSVGKGA 495
           Q+SAFHIFK+FVANPNKPQE+ +ILA+NHEKLL LL+NLS GKG+
Sbjct: 274 QVSAFHIFKIFVANPNKPQEVKIILARNHEKLLELLNNLSPGKGS 318


>ref|XP_002516814.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223543902|gb|EEF45428.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 631

 Score =  248 bits (632), Expect = 1e-63
 Identities = 126/165 (76%), Positives = 141/165 (85%)
 Frame = +1

Query: 1   IKFPSLAKYILNSTSFELFFKYVELPNFDVASDAFATFKDLLTRHETAASEFLTARYVEF 180
           IKF SLAKYIL S SFELFFK+VELPNFDVASDAF+TFKDLL +H+T  +E+LTA Y EF
Sbjct: 154 IKFSSLAKYILESASFELFFKFVELPNFDVASDAFSTFKDLLIKHDTVVAEYLTAHYDEF 213

Query: 181 FELYEKLLTSANYVTRRQXXXXXXXXXXXXPNSHIMKRYILEVHHLKVMMTLLKDSSKNI 360
           F+LYEKLLTS NYVTRRQ            PNSHIMKRYILEV +LKVMMTLLKDSSKNI
Sbjct: 214 FDLYEKLLTSPNYVTRRQSLKLLSDFLLEPPNSHIMKRYILEVRYLKVMMTLLKDSSKNI 273

Query: 361 QISAFHIFKVFVANPNKPQEIIVILAKNHEKLLALLHNLSVGKGA 495
           QISAFHIFKVFVANPNKP+E+ VILAKN+E+L+ LL++LSVGKGA
Sbjct: 274 QISAFHIFKVFVANPNKPREVKVILAKNNERLVELLNDLSVGKGA 318


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