BLASTX nr result

ID: Coptis23_contig00030988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030988
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274223.1| PREDICTED: vignain-like [Vitis vinifera]          122   2e-26
ref|XP_002334495.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_002327317.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
dbj|BAD29959.1| cysteine protease [Daucus carota]                     114   6e-24
ref|XP_002330656.1| predicted protein [Populus trichocarpa] gi|2...   113   1e-23

>ref|XP_002274223.1| PREDICTED: vignain-like [Vitis vinifera]
          Length = 340

 Score =  122 bits (307), Expect = 2e-26
 Identities = 61/90 (67%), Positives = 70/90 (77%)
 Frame = +1

Query: 7   EKETCFEIFKENVKRIESLNRAGNRTYMLSVNGFADQTNEEFKAARNGYKGLGSPAKPLH 186
           EKE  F+IFKENV+ IES+N AGNR Y LS+N FADQTNEEFKA+RNGY  + S  +   
Sbjct: 52  EKERRFKIFKENVEYIESVNSAGNRRYKLSINEFADQTNEEFKASRNGY-NMSSRPRSSE 110

Query: 187 ATPFRYENAIVVPSSMEWRKKGAVTPVKDQ 276
            T FRYEN   VPSSM+WRKKGAVTP+KDQ
Sbjct: 111 ITSFRYENVAAVPSSMDWRKKGAVTPIKDQ 140


>ref|XP_002334495.1| predicted protein [Populus trichocarpa] gi|222872550|gb|EEF09681.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score =  117 bits (293), Expect = 1e-24
 Identities = 57/92 (61%), Positives = 69/92 (75%)
 Frame = +1

Query: 1   ATEKETCFEIFKENVKRIESLNRAGNRTYMLSVNGFADQTNEEFKAARNGYKGLGSPAKP 180
           A EKE  F+IFK NV+ IES N AGN+ Y LSVN FADQTNE+FK ARNGY+      +P
Sbjct: 52  AAEKERRFKIFKNNVEYIESFNTAGNKPYKLSVNKFADQTNEKFKGARNGYR-RPFQTRP 110

Query: 181 LHATPFRYENAIVVPSSMEWRKKGAVTPVKDQ 276
           +  T F+YEN   VP++M+WRKKGAVTP+KDQ
Sbjct: 111 MKVTSFKYENVTAVPATMDWRKKGAVTPIKDQ 142


>ref|XP_002327317.1| predicted protein [Populus trichocarpa] gi|222835687|gb|EEE74122.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score =  116 bits (290), Expect = 2e-24
 Identities = 57/92 (61%), Positives = 68/92 (73%)
 Frame = +1

Query: 1   ATEKETCFEIFKENVKRIESLNRAGNRTYMLSVNGFADQTNEEFKAARNGYKGLGSPAKP 180
           A EKE  FEIFK+NV+ IES N AGN+ Y LSVN FAD TNEE K ARNGY+      +P
Sbjct: 52  AAEKERRFEIFKDNVEYIESFNTAGNKPYKLSVNKFADLTNEELKVARNGYR-RPLQTRP 110

Query: 181 LHATPFRYENAIVVPSSMEWRKKGAVTPVKDQ 276
           +  T F+YEN   VP++M+WRKKGAVTP+KDQ
Sbjct: 111 MKVTSFKYENVTAVPATMDWRKKGAVTPIKDQ 142


>dbj|BAD29959.1| cysteine protease [Daucus carota]
          Length = 361

 Score =  114 bits (286), Expect = 6e-24
 Identities = 56/90 (62%), Positives = 68/90 (75%)
 Frame = +1

Query: 7   EKETCFEIFKENVKRIESLNRAGNRTYMLSVNGFADQTNEEFKAARNGYKGLGSPAKPLH 186
           EK   F+IF +NVK IE  N+ G ++Y L+VN FADQTNEEF+A+RNGYK +   ++P  
Sbjct: 73  EKSVRFQIFMDNVKFIEEFNKDGRQSYKLAVNEFADQTNEEFQASRNGYK-MAVSSRPSQ 131

Query: 187 ATPFRYENAIVVPSSMEWRKKGAVTPVKDQ 276
            T FRYEN   VPSSM+WRKKGAVTPVKDQ
Sbjct: 132 TTLFRYENVTAVPSSMDWRKKGAVTPVKDQ 161


>ref|XP_002330656.1| predicted protein [Populus trichocarpa] gi|222872260|gb|EEF09391.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score =  113 bits (283), Expect = 1e-23
 Identities = 56/92 (60%), Positives = 68/92 (73%)
 Frame = +1

Query: 1   ATEKETCFEIFKENVKRIESLNRAGNRTYMLSVNGFADQTNEEFKAARNGYKGLGSPAKP 180
           A EKE  F+IFK NV+ IES N AGN+ Y LSVN FADQTNE+FK ARNGY+      +P
Sbjct: 52  AAEKERRFKIFKNNVEYIESFNTAGNKPYKLSVNKFADQTNEKFKGARNGYR-RPFQTRP 110

Query: 181 LHATPFRYENAIVVPSSMEWRKKGAVTPVKDQ 276
           +  T F+YEN   VP++M+WRKKGAVT +KDQ
Sbjct: 111 MKVTSFKYENVTAVPATMDWRKKGAVTLIKDQ 142


Top