BLASTX nr result

ID: Coptis23_contig00030979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030979
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACX37089.1| potassium channel [Zygophyllum xanthoxylum]            112   2e-23
ref|XP_003609240.1| Potassium channel [Medicago truncatula] gi|3...   110   1e-22
ref|XP_002281787.1| PREDICTED: potassium channel AKT1-like [Viti...   109   3e-22
emb|CBI28150.3| unnamed protein product [Vitis vinifera]              109   3e-22
emb|CAN80462.1| hypothetical protein VITISV_015412 [Vitis vinifera]   109   3e-22

>gb|ACX37089.1| potassium channel [Zygophyllum xanthoxylum]
          Length = 869

 Score =  112 bits (281), Expect = 2e-23
 Identities = 59/104 (56%), Positives = 70/104 (67%)
 Frame = -2

Query: 313 CGEIGVLCYKPQPYTIXXXXXXXXXXXXXXXXXNIVQAHVGDGTIIMNNLLQHLKGSTDL 134
           CGEIGVLCY+PQP+T+                 NI+Q +VGDGTIIMNNLLQ+LK   D 
Sbjct: 445 CGEIGVLCYRPQPFTVRTKRLCQLLRINRTRFMNIIQTNVGDGTIIMNNLLQYLKEQKDP 504

Query: 133 KLEEFLMETEKMLACDKMDLSPSLCFAASKGDDRLLHKLLNQDL 2
            LE  L+ETE MLA   MDL  SLCFAA++GDD LLH+LL + L
Sbjct: 505 VLENILLETETMLARGIMDLPLSLCFAANRGDDSLLHQLLKRGL 548


>ref|XP_003609240.1| Potassium channel [Medicago truncatula] gi|355510295|gb|AES91437.1|
           Potassium channel [Medicago truncatula]
          Length = 888

 Score =  110 bits (275), Expect = 1e-22
 Identities = 60/104 (57%), Positives = 69/104 (66%)
 Frame = -2

Query: 313 CGEIGVLCYKPQPYTIXXXXXXXXXXXXXXXXXNIVQAHVGDGTIIMNNLLQHLKGSTDL 134
           CGEIGVLCYKPQ +T+                 NIVQA+VGDGTIIMNNLLQHLK   D 
Sbjct: 439 CGEIGVLCYKPQHFTVRTKRLSQLLRLNRTTFLNIVQANVGDGTIIMNNLLQHLKELNDP 498

Query: 133 KLEEFLMETEKMLACDKMDLSPSLCFAASKGDDRLLHKLLNQDL 2
            +E  L+ETE MLA  +MDL  SLCFAA +GDD LL +LL + L
Sbjct: 499 IMEGVLVETENMLARGRMDLPVSLCFAAERGDDLLLQQLLKRGL 542


>ref|XP_002281787.1| PREDICTED: potassium channel AKT1-like [Vitis vinifera]
          Length = 872

 Score =  109 bits (272), Expect = 3e-22
 Identities = 59/104 (56%), Positives = 69/104 (66%)
 Frame = -2

Query: 313 CGEIGVLCYKPQPYTIXXXXXXXXXXXXXXXXXNIVQAHVGDGTIIMNNLLQHLKGSTDL 134
           CGEIGVLCY+PQ +T+                 NIVQA+VGDGTIIMNNLLQHLK   D 
Sbjct: 447 CGEIGVLCYRPQLFTVRTKRLCQLLRLNRTTFLNIVQANVGDGTIIMNNLLQHLKDLKDP 506

Query: 133 KLEEFLMETEKMLACDKMDLSPSLCFAASKGDDRLLHKLLNQDL 2
            +E  L+ETE MLA  +MDL  SLCFA  +GDD LLH+LL + L
Sbjct: 507 IMEGVLVETENMLARGRMDLPLSLCFATLRGDDLLLHQLLKRGL 550


>emb|CBI28150.3| unnamed protein product [Vitis vinifera]
          Length = 872

 Score =  109 bits (272), Expect = 3e-22
 Identities = 59/104 (56%), Positives = 69/104 (66%)
 Frame = -2

Query: 313 CGEIGVLCYKPQPYTIXXXXXXXXXXXXXXXXXNIVQAHVGDGTIIMNNLLQHLKGSTDL 134
           CGEIGVLCY+PQ +T+                 NIVQA+VGDGTIIMNNLLQHLK   D 
Sbjct: 447 CGEIGVLCYRPQLFTVRTKRLCQLLRLNRTTFLNIVQANVGDGTIIMNNLLQHLKDLKDP 506

Query: 133 KLEEFLMETEKMLACDKMDLSPSLCFAASKGDDRLLHKLLNQDL 2
            +E  L+ETE MLA  +MDL  SLCFA  +GDD LLH+LL + L
Sbjct: 507 IMEGVLVETENMLARGRMDLPLSLCFATLRGDDLLLHQLLKRGL 550


>emb|CAN80462.1| hypothetical protein VITISV_015412 [Vitis vinifera]
          Length = 840

 Score =  109 bits (272), Expect = 3e-22
 Identities = 59/104 (56%), Positives = 69/104 (66%)
 Frame = -2

Query: 313 CGEIGVLCYKPQPYTIXXXXXXXXXXXXXXXXXNIVQAHVGDGTIIMNNLLQHLKGSTDL 134
           CGEIGVLCY+PQ +T+                 NIVQA+VGDGTIIMNNLLQHLK   D 
Sbjct: 415 CGEIGVLCYRPQLFTVRTKRLCQLLRLNRTTFLNIVQANVGDGTIIMNNLLQHLKDLKDP 474

Query: 133 KLEEFLMETEKMLACDKMDLSPSLCFAASKGDDRLLHKLLNQDL 2
            +E  L+ETE MLA  +MDL  SLCFA  +GDD LLH+LL + L
Sbjct: 475 IMEGVLVETENMLARGRMDLPLSLCFATLRGDDLLLHQLLKRGL 518


Top