BLASTX nr result

ID: Coptis23_contig00030971 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030971
         (692 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518298.1| telomerase reverse transcriptase, putative [...   102   5e-20
gb|AEA72244.1| telomerase reverse transcriptase, partial [Nicoti...    93   6e-17
gb|AAX19886.1| telomerase reverse transcriptase catalytic subuni...    91   2e-16
gb|ACH81294.1| telomerase reverse transcriptase [Populus trichoc...    89   8e-16
gb|AEB33869.1| telomerase reverse transcriptase, partial [Nicoti...    87   3e-15

>ref|XP_002518298.1| telomerase reverse transcriptase, putative [Ricinus communis]
           gi|223542518|gb|EEF44058.1| telomerase reverse
           transcriptase, putative [Ricinus communis]
          Length = 1224

 Score =  102 bits (255), Expect = 5e-20
 Identities = 54/135 (40%), Positives = 78/135 (57%)
 Frame = +2

Query: 212 QCLCFWMLQTLQKVAQGELINRKGIFYKSNCFASLFPKKHILNTSKTSDTGAMHVFKDIF 391
           QC C  +LQ    V +G  INR+ IFY S   +S+ P+KH+LN+ K + +G+  +F  IF
Sbjct: 387 QCPCCLVLQDALLVTKGAQINRQPIFYSSERSSSVLPRKHLLNSLKPNFSGSKTLFGSIF 446

Query: 392 GISDENLVFMSLPCALKCQFCLKGSPCLFHSLRKLLKCLLHQVRICHYSKLMDKHYTVEA 571
           G+S+ N    S+ C+    FCL GS CL+HSL K LK L+ + R C +  L+DKH  V +
Sbjct: 447 GLSNVNARAPSVLCSHSSSFCLLGSACLYHSLIKFLKTLIRRNRCCKHLHLLDKHCAVPS 506

Query: 572 LEMCTMGEAEPMLKK 616
           L       A  + +K
Sbjct: 507 LTQAMNQNASSLFEK 521


>gb|AEA72244.1| telomerase reverse transcriptase, partial [Nicotiana
           tomentosiformis]
          Length = 668

 Score = 92.8 bits (229), Expect = 6e-17
 Identities = 46/124 (37%), Positives = 69/124 (55%)
 Frame = +2

Query: 215 CLCFWMLQTLQKVAQGELINRKGIFYKSNCFASLFPKKHILNTSKTSDTGAMHVFKDIFG 394
           C C  + QT+  V +   INR+ IFYK   F S+FP K+I+N+ K   +GA  +FK+IFG
Sbjct: 154 CSCCSVFQTIPGVKKEVQINRQTIFYKLESFPSVFPSKYIMNSLKPDSSGANRLFKEIFG 213

Query: 395 ISDENLVFMSLPCALKCQFCLKGSPCLFHSLRKLLKCLLHQVRICHYSKLMDKHYTVEAL 574
               N+      C          S CL+HS+ KLLK L+ +   C + +L++KH +  +L
Sbjct: 214 SLGVNVTTQIASCTHSSNCTFIRSTCLYHSIIKLLKTLIRKAHHCQHVRLLEKHCSTPSL 273

Query: 575 EMCT 586
           + CT
Sbjct: 274 DQCT 277


>gb|AAX19886.1| telomerase reverse transcriptase catalytic subunit [Doryanthes
           excelsa] gi|60418920|gb|AAX19887.1| telomerase reverse
           transcriptase catalytic subunit [Doryanthes excelsa]
          Length = 1323

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 52/122 (42%), Positives = 70/122 (57%)
 Frame = +2

Query: 212 QCLCFWMLQTLQKVAQGELINRKGIFYKSNCFASLFPKKHILNTSKTSDTGAMHVFKDIF 391
           QC C  +L+T QK A  + INRK IFYK+    S+FP++HILN  K  ++GA  + K IF
Sbjct: 382 QCFCCSILRTSQKAAMEDQINRKSIFYKTVSSYSIFPRRHILNRVKPDNSGAAFLMKHIF 441

Query: 392 GISDENLVFMSLPCALKCQFCLKGSPCLFHSLRKLLKCLLHQVRICHYSKLMDKHYTVEA 571
           G S+E+  F S  C  +     K S CL H L  LLK L+   + CHY KL+ +H  +  
Sbjct: 442 GFSNED--FHS--CIHRSGLGAKNSNCLNHYLLGLLKSLIRNAQHCHYKKLLLRHCPLPT 497

Query: 572 LE 577
            E
Sbjct: 498 YE 499


>gb|ACH81294.1| telomerase reverse transcriptase [Populus trichocarpa]
          Length = 1128

 Score = 89.0 bits (219), Expect = 8e-16
 Identities = 43/102 (42%), Positives = 65/102 (63%)
 Frame = +2

Query: 269 INRKGIFYKSNCFASLFPKKHILNTSKTSDTGAMHVFKDIFGISDENLVFMSLPCALKCQ 448
           I+R+ IFY S   +S+ PK H+L   K +  G+  + + IFG+SDEN+   S+P +    
Sbjct: 277 IDRRPIFYNSKHPSSMLPKNHVLMCLKPNLIGSKSLIQSIFGLSDENVSAPSMPLSYSKD 336

Query: 449 FCLKGSPCLFHSLRKLLKCLLHQVRICHYSKLMDKHYTVEAL 574
           FCL GS CL+HSL KL+K L+ Q + C Y++L+ +H  V +L
Sbjct: 337 FCLLGSTCLYHSLVKLVKVLVRQTQCCKYARLIHRHCFVSSL 378


>gb|AEB33869.1| telomerase reverse transcriptase, partial [Nicotiana tabacum]
          Length = 537

 Score = 87.0 bits (214), Expect = 3e-15
 Identities = 44/114 (38%), Positives = 63/114 (55%)
 Frame = +2

Query: 215 CLCFWMLQTLQKVAQGELINRKGIFYKSNCFASLFPKKHILNTSKTSDTGAMHVFKDIFG 394
           C C  + QT+ +V +   INR+ IFYK   F S+FP KHILN+ K   +GA  +FK+IF 
Sbjct: 177 CSCCLVFQTIPEVKKEVQINRQTIFYKLESFPSVFPSKHILNSLKPDSSGANRLFKEIFR 236

Query: 395 ISDENLVFMSLPCALKCQFCLKGSPCLFHSLRKLLKCLLHQVRICHYSKLMDKH 556
               N+      C          S CL+HS+ KLLK L+ +   C + +L++KH
Sbjct: 237 SLGVNVTTQIASCTHSSNCTFIRSTCLYHSIIKLLKTLIRKAHHCQHVRLLEKH 290


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