BLASTX nr result

ID: Coptis23_contig00030966 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030966
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78062.1| hypothetical protein VITISV_036399 [Vitis vinifera]    99   4e-19
emb|CAN68902.1| hypothetical protein VITISV_031323 [Vitis vinifera]    98   6e-19
emb|CAN65706.1| hypothetical protein VITISV_001745 [Vitis vinifera]    96   2e-18
emb|CAN73495.1| hypothetical protein VITISV_044262 [Vitis vinifera]    96   4e-18
emb|CAN73158.1| hypothetical protein VITISV_017219 [Vitis vinifera]    95   7e-18

>emb|CAN78062.1| hypothetical protein VITISV_036399 [Vitis vinifera]
          Length = 522

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 38/69 (55%), Positives = 50/69 (72%)
 Frame = -2

Query: 235 FPHKTVWNKLVPTKVCFFVWALLWGRTLTTDNLRKRGQVMVNRCVMCAQEEESIQHLFLD 56
           FPH  +WN  VP+KVCFF W   WG+ LT D L+KRG  +VNRC +C +EEESI H+ + 
Sbjct: 355 FPHGLIWNPSVPSKVCFFAWEASWGKVLTMDQLKKRGXAVVNRCFLCCEEEESIDHILIH 414

Query: 55  CSMAKKLWE 29
           CS A++LW+
Sbjct: 415 CSKARELWD 423


>emb|CAN68902.1| hypothetical protein VITISV_031323 [Vitis vinifera]
          Length = 1206

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 38/69 (55%), Positives = 48/69 (69%)
 Frame = -2

Query: 235 FPHKTVWNKLVPTKVCFFVWALLWGRTLTTDNLRKRGQVMVNRCVMCAQEEESIQHLFLD 56
           FP   +WN  VPTKVCFF W   WG+ LT D L+KRG+ + NRC +C +EEESI H+ + 
Sbjct: 440 FPINIIWNPCVPTKVCFFAWEAFWGKVLTLDQLKKRGRCLANRCFLCCEEEESIDHILIQ 499

Query: 55  CSMAKKLWE 29
           CS A+ LWE
Sbjct: 500 CSKARMLWE 508


>emb|CAN65706.1| hypothetical protein VITISV_001745 [Vitis vinifera]
          Length = 982

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 37/69 (53%), Positives = 48/69 (69%)
 Frame = -2

Query: 235 FPHKTVWNKLVPTKVCFFVWALLWGRTLTTDNLRKRGQVMVNRCVMCAQEEESIQHLFLD 56
           FPH  +WN  VP+KVCFF W   WG+ LT D L+KRG  + NRC +C +EEESI H+ + 
Sbjct: 694 FPHGLIWNPSVPSKVCFFAWEASWGKVLTMDQLKKRGWAVANRCFLCCEEEESIDHILIH 753

Query: 55  CSMAKKLWE 29
           CS A+ LW+
Sbjct: 754 CSKARDLWD 762


>emb|CAN73495.1| hypothetical protein VITISV_044262 [Vitis vinifera]
          Length = 308

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 39/77 (50%), Positives = 47/77 (61%)
 Frame = -2

Query: 235 FPHKTVWNKLVPTKVCFFVWALLWGRTLTTDNLRKRGQVMVNRCVMCAQEEESIQHLFLD 56
           FP    WN  VP KVCFF W   WG+TLT D L++RG  + NRC +C   EESI H+ L 
Sbjct: 185 FPSSVAWNAWVPPKVCFFAWEATWGKTLTLDQLQRRGWSLANRCFLCLSHEESIDHILLH 244

Query: 55  CSMAKKLWEYFLSTLRI 5
           C  A+ LWE F S  R+
Sbjct: 245 CDKARVLWELFFSLFRV 261


>emb|CAN73158.1| hypothetical protein VITISV_017219 [Vitis vinifera]
          Length = 500

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 37/73 (50%), Positives = 49/73 (67%)
 Frame = -2

Query: 235 FPHKTVWNKLVPTKVCFFVWALLWGRTLTTDNLRKRGQVMVNRCVMCAQEEESIQHLFLD 56
           FPH  +WN  VP+KV FF W   WG+ LT D L+KRG  + NRC +C +EEESI H+ + 
Sbjct: 348 FPHGLIWNPSVPSKVGFFAWEASWGKVLTMDQLKKRGWALANRCFLCCEEEESIDHILIH 407

Query: 55  CSMAKKLWEYFLS 17
           CS A+ LWE+  +
Sbjct: 408 CSRARALWEFLFA 420


Top