BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030958
         (985 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325119.1| predicted protein [Populus trichocarpa] gi|2...   482   e-134
emb|CBI36559.3| unnamed protein product [Vitis vinifera]              479   e-133
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   479   e-133
ref|XP_002308414.1| predicted protein [Populus trichocarpa] gi|2...   466   e-129
ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   463   e-128

>ref|XP_002325119.1| predicted protein [Populus trichocarpa] gi|222866553|gb|EEF03684.1|
            predicted protein [Populus trichocarpa]
          Length = 882

 Score =  482 bits (1240), Expect = e-134
 Identities = 228/327 (69%), Positives = 275/327 (84%)
 Frame = -2

Query: 984  CVRVVQAAVHIGEAIENEVRIHSFLERTKKFRSRKAIEVDEDDSLSKKQEILRKNVKNLI 805
            CVRVVQAAV IG AIE EVRIH+FLE+TK ++ +K +  +  +++ K++E+LRK V +LI
Sbjct: 149  CVRVVQAAVQIGMAIEQEVRIHNFLEKTKNYQRKKTMH-EVQETMDKEKEVLRKRVNSLI 207

Query: 804  KRQRLKEVQRLVKSEDGTKSWGRDAQAKLGSRLIELLIETAFVQPPVKQLPDDPPEIRPA 625
            +R+RL EVQ LVK +D TK W R  QAKLGSRLIELL ETA+VQPPV Q  D PP++RPA
Sbjct: 208  RRKRLMEVQNLVK-QDETKPWSRGTQAKLGSRLIELLTETAYVQPPVNQSEDIPPDVRPA 266

Query: 624  FKHTFKTLMKEAGRRGGNRYGVIECDSLVREGLDRTARHMVIPYVPMLIPPRKWKGYERG 445
            F+H FKTL K  G++   +YGVIECD L+  GLD TA+HM+IPY PML+PP+KWKGY++G
Sbjct: 267  FRHIFKTLTKNPGQKIVKKYGVIECDPLILTGLDGTAKHMLIPYFPMLVPPKKWKGYDKG 326

Query: 444  GHLFLPSYVMRTHGARQQQDAMKSVPRKQMEKVFEALDTLGQTKWRVNKRVLAAVESLWE 265
            GHLFLPSYVMRTHG+RQQQ A++SVP KQM+KVFEALDTLG TKWRVN+R+L  VE +W 
Sbjct: 327  GHLFLPSYVMRTHGSRQQQVAVRSVPGKQMQKVFEALDTLGNTKWRVNRRLLDVVERIWT 386

Query: 264  SGGNVAGLVDREDVCVPEKPLSDDGTEMQKWKWSMKKVNKCNRERHAQRCDIELKLSVAR 85
            SGGN+AGLVDRED+ +PEKP SDD TE+QKWKWS++K  K N+ERH+QRCD ELKLSVAR
Sbjct: 387  SGGNIAGLVDREDIPIPEKPSSDDLTEIQKWKWSVRKAKKINQERHSQRCDTELKLSVAR 446

Query: 84   KMKDEEGFYYPHNLDFRGRAYPMHPHL 4
            K+KDEEGFYYPHNLDFRGRAYPMHPHL
Sbjct: 447  KLKDEEGFYYPHNLDFRGRAYPMHPHL 473


>emb|CBI36559.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score =  479 bits (1232), Expect = e-133
 Identities = 227/328 (69%), Positives = 278/328 (84%)
 Frame = -2

Query: 984  CVRVVQAAVHIGEAIENEVRIHSFLERTKKFRSRKAIEVDEDDSLSKKQEILRKNVKNLI 805
            CVRVVQAAV IG AIE EVRIHSFLE+TK F   K +   ++    +++EILRK VK+ I
Sbjct: 76   CVRVVQAAVQIGMAIEQEVRIHSFLEKTKNFERHKTVGHSQEGL--REKEILRKRVKSFI 133

Query: 804  KRQRLKEVQRLVKSEDGTKSWGRDAQAKLGSRLIELLIETAFVQPPVKQLPDDPPEIRPA 625
            +++++ EVQ+LVK+E+ T  WGRD QAKLGSRLIELL ETA+VQ PV Q  D PP++RPA
Sbjct: 134  RKKKIIEVQKLVKNEEITP-WGRDTQAKLGSRLIELLTETAYVQTPVNQSADCPPDVRPA 192

Query: 624  FKHTFKTLMKEAGRRGGNRYGVIECDSLVREGLDRTARHMVIPYVPMLIPPRKWKGYERG 445
            F+HTFKT+ KE+G++   +YGVIECD LV  GLDRTA+HMVIPYVPMLIPP+KWKGY++G
Sbjct: 193  FRHTFKTVTKESGQKDWRKYGVIECDPLVLIGLDRTAKHMVIPYVPMLIPPKKWKGYDKG 252

Query: 444  GHLFLPSYVMRTHGARQQQDAMKSVPRKQMEKVFEALDTLGQTKWRVNKRVLAAVESLWE 265
            G+LFLPSYVMRTHG+R+QQDA+KSVPR+Q++KVFEALDTLG TKWR+N+RVL+ VES+W 
Sbjct: 253  GYLFLPSYVMRTHGSRKQQDAVKSVPRRQLQKVFEALDTLGNTKWRINRRVLSVVESIWA 312

Query: 264  SGGNVAGLVDREDVCVPEKPLSDDGTEMQKWKWSMKKVNKCNRERHAQRCDIELKLSVAR 85
             GGN+ GLVDRE+V +PEKP ++D TE+Q WKW+ +K  K N+ERH+ RCD E+KLSVAR
Sbjct: 313  RGGNLGGLVDRENVPLPEKPSTEDLTEIQNWKWNARKAKKINQERHSLRCDTEIKLSVAR 372

Query: 84   KMKDEEGFYYPHNLDFRGRAYPMHPHLN 1
            KMKDEEGFYYPHNLDFRGRAYPMHPHLN
Sbjct: 373  KMKDEEGFYYPHNLDFRGRAYPMHPHLN 400


>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
            vinifera]
          Length = 979

 Score =  479 bits (1232), Expect = e-133
 Identities = 227/328 (69%), Positives = 278/328 (84%)
 Frame = -2

Query: 984  CVRVVQAAVHIGEAIENEVRIHSFLERTKKFRSRKAIEVDEDDSLSKKQEILRKNVKNLI 805
            CVRVVQAAV IG AIE EVRIHSFLE+TK F   K +   ++    +++EILRK VK+ I
Sbjct: 247  CVRVVQAAVQIGMAIEQEVRIHSFLEKTKNFERHKTVGHSQEGL--REKEILRKRVKSFI 304

Query: 804  KRQRLKEVQRLVKSEDGTKSWGRDAQAKLGSRLIELLIETAFVQPPVKQLPDDPPEIRPA 625
            +++++ EVQ+LVK+E+ T  WGRD QAKLGSRLIELL ETA+VQ PV Q  D PP++RPA
Sbjct: 305  RKKKIIEVQKLVKNEEITP-WGRDTQAKLGSRLIELLTETAYVQTPVNQSADCPPDVRPA 363

Query: 624  FKHTFKTLMKEAGRRGGNRYGVIECDSLVREGLDRTARHMVIPYVPMLIPPRKWKGYERG 445
            F+HTFKT+ KE+G++   +YGVIECD LV  GLDRTA+HMVIPYVPMLIPP+KWKGY++G
Sbjct: 364  FRHTFKTVTKESGQKDWRKYGVIECDPLVLIGLDRTAKHMVIPYVPMLIPPKKWKGYDKG 423

Query: 444  GHLFLPSYVMRTHGARQQQDAMKSVPRKQMEKVFEALDTLGQTKWRVNKRVLAAVESLWE 265
            G+LFLPSYVMRTHG+R+QQDA+KSVPR+Q++KVFEALDTLG TKWR+N+RVL+ VES+W 
Sbjct: 424  GYLFLPSYVMRTHGSRKQQDAVKSVPRRQLQKVFEALDTLGNTKWRINRRVLSVVESIWA 483

Query: 264  SGGNVAGLVDREDVCVPEKPLSDDGTEMQKWKWSMKKVNKCNRERHAQRCDIELKLSVAR 85
             GGN+ GLVDRE+V +PEKP ++D TE+Q WKW+ +K  K N+ERH+ RCD E+KLSVAR
Sbjct: 484  RGGNLGGLVDRENVPLPEKPSTEDLTEIQNWKWNARKAKKINQERHSLRCDTEIKLSVAR 543

Query: 84   KMKDEEGFYYPHNLDFRGRAYPMHPHLN 1
            KMKDEEGFYYPHNLDFRGRAYPMHPHLN
Sbjct: 544  KMKDEEGFYYPHNLDFRGRAYPMHPHLN 571


>ref|XP_002308414.1| predicted protein [Populus trichocarpa] gi|222854390|gb|EEE91937.1|
            predicted protein [Populus trichocarpa]
          Length = 982

 Score =  466 bits (1199), Expect = e-129
 Identities = 223/327 (68%), Positives = 270/327 (82%)
 Frame = -2

Query: 984  CVRVVQAAVHIGEAIENEVRIHSFLERTKKFRSRKAIEVDEDDSLSKKQEILRKNVKNLI 805
            CVRVVQAAV IG AIE EVRIH+FLE+TK  + +K +  D  +S+ K++E+LRK V +LI
Sbjct: 249  CVRVVQAAVQIGIAIEQEVRIHNFLEKTKNHQRKKTMH-DVQESMDKEKEMLRKRVNSLI 307

Query: 804  KRQRLKEVQRLVKSEDGTKSWGRDAQAKLGSRLIELLIETAFVQPPVKQLPDDPPEIRPA 625
            +R+RL EVQ LV  +D TK W RD QAKLGSRLIELL ETA+VQPPV Q    PP++RPA
Sbjct: 308  RRKRLMEVQNLV-IQDETKPWNRDKQAKLGSRLIELLTETAYVQPPVDQSEGIPPDVRPA 366

Query: 624  FKHTFKTLMKEAGRRGGNRYGVIECDSLVREGLDRTARHMVIPYVPMLIPPRKWKGYERG 445
            F+H FK++ K  G++   +YGVIECD L+  GLD TA+HM+IPY PML+PP+KW+GY++G
Sbjct: 367  FRHIFKSVTKNPGQKTVKKYGVIECDPLILTGLDGTAKHMLIPYFPMLVPPKKWRGYDKG 426

Query: 444  GHLFLPSYVMRTHGARQQQDAMKSVPRKQMEKVFEALDTLGQTKWRVNKRVLAAVESLWE 265
            GHLFLPSY+MRTHG+RQQQDA++SVP KQM+KVFEALDTLG TKWRVN +VL  VE +W 
Sbjct: 427  GHLFLPSYIMRTHGSRQQQDAVRSVPGKQMQKVFEALDTLGNTKWRVNGKVLDVVERIWA 486

Query: 264  SGGNVAGLVDREDVCVPEKPLSDDGTEMQKWKWSMKKVNKCNRERHAQRCDIELKLSVAR 85
            SGGN AGLV+R D+ +PEK  SDD TE+QKWKWS++K  K N+ERH+QRCD ELKLSVAR
Sbjct: 487  SGGNNAGLVNRGDIPIPEKLSSDDLTEIQKWKWSVRKAKKINQERHSQRCDTELKLSVAR 546

Query: 84   KMKDEEGFYYPHNLDFRGRAYPMHPHL 4
            K+KDEEGFYYPHNLDFRGRAYPMHPHL
Sbjct: 547  KLKDEEGFYYPHNLDFRGRAYPMHPHL 573


>ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Cucumis
            sativus]
          Length = 975

 Score =  463 bits (1192), Expect = e-128
 Identities = 226/329 (68%), Positives = 270/329 (82%), Gaps = 1/329 (0%)
 Frame = -2

Query: 984  CVRVVQAAVHIGEAIENEVRIHSFLERTKKFRSRKAIEVDED-DSLSKKQEILRKNVKNL 808
            CV+VVQAAV IG AIE EVRI S LE   K RS +  +V  D + L+K++E+LRK V  L
Sbjct: 244  CVQVVQAAVQIGGAIEQEVRIQSILE---KARSNQRTKVRADTECLTKEKEVLRKQVNGL 300

Query: 807  IKRQRLKEVQRLVKSEDGTKSWGRDAQAKLGSRLIELLIETAFVQPPVKQLPDDPPEIRP 628
            I+R++LKEVQ+L+K E+  K+WGRD QAKLGSRLIELLIE+AF+QPPV Q  D PP+IRP
Sbjct: 301  IRRRKLKEVQKLLKKEE-FKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRP 359

Query: 627  AFKHTFKTLMKEAGRRGGNRYGVIECDSLVREGLDRTARHMVIPYVPMLIPPRKWKGYER 448
            AF H FK + K  G+    +YGV+ECD +V  GLDRTA+HM+IPY+PML+PP+KWKGY++
Sbjct: 360  AFWHGFKPVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKKWKGYDK 419

Query: 447  GGHLFLPSYVMRTHGARQQQDAMKSVPRKQMEKVFEALDTLGQTKWRVNKRVLAAVESLW 268
            GGH FLPSYVMRTHG+ +QQDAMK++  KQM+KVFEALD LG TKWRVN+ VL+ VESLW
Sbjct: 420  GGHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVESLW 479

Query: 267  ESGGNVAGLVDREDVCVPEKPLSDDGTEMQKWKWSMKKVNKCNRERHAQRCDIELKLSVA 88
              GGN AGLVDR+DV +PEKPL  D TEMQ+W+WSMKK  K N+E H+QRCD+ELKLSVA
Sbjct: 480  AQGGNTAGLVDRKDVPIPEKPLG-DLTEMQEWRWSMKKAKKINQELHSQRCDVELKLSVA 538

Query: 87   RKMKDEEGFYYPHNLDFRGRAYPMHPHLN 1
            RKMKDEEGFYYPHNLDFRGRAYPMHPHLN
Sbjct: 539  RKMKDEEGFYYPHNLDFRGRAYPMHPHLN 567