BLASTX nr result

ID: Coptis23_contig00030945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030945
         (599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284916.2| PREDICTED: uncharacterized acetyltransferase...   182   5e-44
ref|XP_003634440.1| PREDICTED: uncharacterized acetyltransferase...   173   2e-41
emb|CAN78155.1| hypothetical protein VITISV_032623 [Vitis vinifera]   173   2e-41
ref|XP_003634439.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   166   2e-39
ref|XP_003525889.1| PREDICTED: uncharacterized acetyltransferase...   164   1e-38

>ref|XP_002284916.2| PREDICTED: uncharacterized acetyltransferase At3g50280-like [Vitis
           vinifera]
          Length = 454

 Score =  182 bits (461), Expect = 5e-44
 Identities = 86/145 (59%), Positives = 110/145 (75%), Gaps = 5/145 (3%)
 Frame = -3

Query: 438 VRRVSSWAVNPHCVTEESQKPCYLTPWDLAMLSVNYIQKGLLFTKPPDVD-----MQTII 274
           VR +S   + P   +EE+++PCYLTPWDLAMLSVNYIQKGLLF+KPPDVD     M T++
Sbjct: 6   VRLISECFIKPKFTSEETKEPCYLTPWDLAMLSVNYIQKGLLFSKPPDVDDPQNFMATLL 65

Query: 273 EHLKDSLSRALTHFFPLSGRLVTKKGADPPSYHVVIDCTDAPGAEFIHAVADLTVADITS 94
           + LKDSL+  L HF+PL+GRL TKK   PPSY V +DC ++PGA+FIHA AD+T++DI S
Sbjct: 66  DRLKDSLALTLDHFYPLAGRLATKKEDSPPSYVVFVDCNNSPGAKFIHAAADMTISDILS 125

Query: 93  AGDVPPFVESFFAFNGVVNHDGHTL 19
              VP  ++SFF  + V+NHDGHTL
Sbjct: 126 PIYVPQVIQSFFDHDRVINHDGHTL 150


>ref|XP_003634440.1| PREDICTED: uncharacterized acetyltransferase At3g50280-like [Vitis
           vinifera]
          Length = 390

 Score =  173 bits (438), Expect = 2e-41
 Identities = 83/145 (57%), Positives = 106/145 (73%), Gaps = 5/145 (3%)
 Frame = -3

Query: 438 VRRVSSWAVNPHCVTEESQKPCYLTPWDLAMLSVNYIQKGLLFTKPPDVD-----MQTII 274
           VR +S   + P   +EE+ +PCYLTPWDLAMLSVNYIQKGLLF+KPPDVD     M T++
Sbjct: 6   VRLISECFIKPKFTSEETNEPCYLTPWDLAMLSVNYIQKGLLFSKPPDVDDPQNFMATLL 65

Query: 273 EHLKDSLSRALTHFFPLSGRLVTKKGADPPSYHVVIDCTDAPGAEFIHAVADLTVADITS 94
           + LKDSL+  L HF+PL+GRL TKK    PSY V +DC ++PG +FIHA AD+T++DI S
Sbjct: 66  DKLKDSLALTLDHFYPLAGRLATKKEDSSPSYVVFVDCNNSPGLKFIHAAADMTISDILS 125

Query: 93  AGDVPPFVESFFAFNGVVNHDGHTL 19
              VP  ++SFF  + V+NHDG TL
Sbjct: 126 PIYVPQVIQSFFDHDRVINHDGRTL 150


>emb|CAN78155.1| hypothetical protein VITISV_032623 [Vitis vinifera]
          Length = 602

 Score =  173 bits (438), Expect = 2e-41
 Identities = 83/145 (57%), Positives = 106/145 (73%), Gaps = 5/145 (3%)
 Frame = -3

Query: 438 VRRVSSWAVNPHCVTEESQKPCYLTPWDLAMLSVNYIQKGLLFTKPPDVD-----MQTII 274
           VR +S   + P   +EE+ +PCYLTPWDLAMLSVNYIQKGLLF+KPPDVD     M T++
Sbjct: 85  VRLISECFIKPKFTSEETNEPCYLTPWDLAMLSVNYIQKGLLFSKPPDVDDPQNFMATLL 144

Query: 273 EHLKDSLSRALTHFFPLSGRLVTKKGADPPSYHVVIDCTDAPGAEFIHAVADLTVADITS 94
           + LKDSL+  L HF+PL+GRL TKK    PSY V +DC ++PG +FIHA AD+T++DI S
Sbjct: 145 DKLKDSLALTLDHFYPLAGRLATKKEDSSPSYVVFVDCNNSPGLKFIHAAADMTISDILS 204

Query: 93  AGDVPPFVESFFAFNGVVNHDGHTL 19
              VP  ++SFF  + V+NHDG TL
Sbjct: 205 PIYVPQVIQSFFDHDRVINHDGRTL 229


>ref|XP_003634439.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized acetyltransferase
           At3g50280-like [Vitis vinifera]
          Length = 465

 Score =  166 bits (421), Expect = 2e-39
 Identities = 81/145 (55%), Positives = 105/145 (72%), Gaps = 5/145 (3%)
 Frame = -3

Query: 438 VRRVSSWAVNPHCVTEESQKPCYLTPWDLAMLSVNYIQKGLLFTKPPDVD-----MQTII 274
           VR +S   + P   +EE+++PCYLTPWDLAMLSVNYIQKGLLF+KP  VD     M T++
Sbjct: 6   VRLISECFIKPKFTSEETKEPCYLTPWDLAMLSVNYIQKGLLFSKPXSVDYPQNFMATLL 65

Query: 273 EHLKDSLSRALTHFFPLSGRLVTKKGADPPSYHVVIDCTDAPGAEFIHAVADLTVADITS 94
           + LKDSL+  L HF+PL+GRL TKK    PSY V +DC ++PGA+FIHA A +T++DI S
Sbjct: 66  DRLKDSLALTLDHFYPLAGRLATKKEDSSPSYVVFVDCNNSPGAKFIHAAAYMTLSDIVS 125

Query: 93  AGDVPPFVESFFAFNGVVNHDGHTL 19
              VP  ++SFF  + V+NHDG TL
Sbjct: 126 PIYVPQVIQSFFDHDRVINHDGRTL 150


>ref|XP_003525889.1| PREDICTED: uncharacterized acetyltransferase At3g50280-like
           [Glycine max]
          Length = 456

 Score =  164 bits (414), Expect = 1e-38
 Identities = 84/148 (56%), Positives = 105/148 (70%), Gaps = 7/148 (4%)
 Frame = -3

Query: 438 VRRVSSWAVNPHCVTEESQKPCYLTPWDLAMLSVNYIQKGLLFTKPPD--VD----MQTI 277
           VR VS   V PHC  +ES + C LTPWD+AMLSV+YIQKGLLF KPP   VD    ++ +
Sbjct: 7   VRHVSECFVKPHCPGQESNQICNLTPWDIAMLSVHYIQKGLLFKKPPTTLVDQHDFIENL 66

Query: 276 IEHLKDSLSRALTHFFPLSGRLVTKKGADPPSYHVVIDC-TDAPGAEFIHAVADLTVADI 100
           +E LK SLS  L HF+PL+GRLVT+K  DPPSY V++DC  ++ GA FI+A  D+T++DI
Sbjct: 67  LEKLKHSLSLTLFHFYPLAGRLVTQKTQDPPSYAVLVDCNNNSDGARFIYATLDMTISDI 126

Query: 99  TSAGDVPPFVESFFAFNGVVNHDGHTLP 16
            S  DVPP V S F  +  VNHDGHT+P
Sbjct: 127 ISPIDVPPIVHSLFDHHKAVNHDGHTMP 154


Top