BLASTX nr result

ID: Coptis23_contig00030944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030944
         (938 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520002.1| conserved hypothetical protein [Ricinus comm...   156   8e-36
ref|XP_002277138.1| PREDICTED: uncharacterized protein LOC100252...   152   1e-34
ref|XP_004143661.1| PREDICTED: uncharacterized protein LOC101216...   149   9e-34
ref|NP_001056606.1| Os06g0114700 [Oryza sativa Japonica Group] g...   142   1e-31
ref|XP_003557165.1| PREDICTED: uncharacterized protein LOC100840...   142   1e-31

>ref|XP_002520002.1| conserved hypothetical protein [Ricinus communis]
           gi|223540766|gb|EEF42326.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 210

 Score =  156 bits (394), Expect = 8e-36
 Identities = 84/177 (47%), Positives = 106/177 (59%), Gaps = 2/177 (1%)
 Frame = -3

Query: 783 GSQVQITALNTCTYPRSPXXXXXXXASVSLMIAQMMINVAAGCICCERNRQPSNSRRTVA 604
           GS+VQ T+   CTYPRSP       ++V+LMIAQ++INVA GCICC+R+  PSNS  T+A
Sbjct: 33  GSEVQFTSATQCTYPRSPALALGLTSAVALMIAQVLINVATGCICCKRSPHPSNSNWTIA 92

Query: 603 LFSYVFSWFTFVIAFLLLLSGASLNDQHGEDGTYFGN-YCYVLKXXXXXXXXXXXXXXXX 427
           L  +V SWFTFVI+FLLLL+GA+LNDQHGE+  YFG+ YCYV+K                
Sbjct: 93  LVCFVVSWFTFVISFLLLLTGAALNDQHGEESMYFGSYYCYVVKPGVFAGGAVLALASVT 152

Query: 426 XXXVYYLTLSSGKK-HEQCGTPSYPNHGIAMXXXXXXXXXXXXXXXXPEDTYNRQQY 259
              +YYLTL+S K  +     P   N GIAM                 EDTY R+Q+
Sbjct: 153 LGILYYLTLNSSKSVNGPWANPPVSNSGIAMGQPQFTPQSTQDPVFVHEDTYMRRQF 209


>ref|XP_002277138.1| PREDICTED: uncharacterized protein LOC100252883 [Vitis vinifera]
           gi|297737365|emb|CBI26566.3| unnamed protein product
           [Vitis vinifera]
          Length = 217

 Score =  152 bits (383), Expect = 1e-34
 Identities = 89/184 (48%), Positives = 107/184 (58%), Gaps = 9/184 (4%)
 Frame = -3

Query: 783 GSQVQITALNTCTYPRSPXXXXXXXASVSLMIAQMMINVAAGCICCERNRQPSNSRRTVA 604
           GSQVQ ++   CTYPRSP       A+V+LMIAQ+MIN+A GCICC R   PSNS  T+A
Sbjct: 33  GSQVQFSSSTACTYPRSPALPLGLTAAVALMIAQVMINIATGCICCRRGPHPSNSNWTLA 92

Query: 603 LFSYVFSWFTFVIAFLLLLSGASLNDQHGEDGTYFGN-YCYVLKXXXXXXXXXXXXXXXX 427
           L  +V SWFTFVIAFLLLL+GA+LNDQHGE+  YFGN YCYV+K                
Sbjct: 93  LICFVVSWFTFVIAFLLLLTGAALNDQHGEESMYFGNYYCYVVKPGVFAGAAVLSLASVT 152

Query: 426 XXXVYYLTLSSGK-KHEQCGTPSYPNH-----GIAM--XXXXXXXXXXXXXXXXPEDTYN 271
              +YYLTLSS K +++    P  PN      GIAM                   EDTY 
Sbjct: 153 LGILYYLTLSSAKERNDPWPGPVAPNQAQVGGGIAMGQPQFPPQNPPNQDPVFVHEDTYM 212

Query: 270 RQQY 259
           R+Q+
Sbjct: 213 RRQF 216


>ref|XP_004143661.1| PREDICTED: uncharacterized protein LOC101216661 [Cucumis sativus]
          Length = 211

 Score =  149 bits (376), Expect = 9e-34
 Identities = 86/206 (41%), Positives = 109/206 (52%), Gaps = 3/206 (1%)
 Frame = -3

Query: 867 VIVVCVTVXXXXXXXXXXXXXXXXXXXKGSQVQITALNTCTYPRSPXXXXXXXASVSLMI 688
           V+VVC  V                   KGSQVQ  + + C YPRSP       A++SL+I
Sbjct: 5   VLVVCSVVGLLGILSAVTGFVAEATRIKGSQVQFISTSECAYPRSPAMGLGLTAAISLLI 64

Query: 687 AQMMINVAAGCICCERNRQPSNSRRTVALFSYVFSWFTFVIAFLLLLSGASLNDQHGEDG 508
           AQ+++NV++GCICC+R+  PSN    +AL S+V SWF+FVIAFLLLL+GA+LNDQHG   
Sbjct: 65  AQLIVNVSSGCICCKRSPNPSNPNWKIALLSFVISWFSFVIAFLLLLTGAALNDQHGGGT 124

Query: 507 TYFGN---YCYVLKXXXXXXXXXXXXXXXXXXXVYYLTLSSGKKHEQCGTPSYPNHGIAM 337
            YFGN   YCYV+K                   VYYLTL+  K +      S P  GIA+
Sbjct: 125 MYFGNYYYYCYVVKPGVFAGGAILSLASVLLAIVYYLTLNLAKNNSPLWGNSAPAQGIAL 184

Query: 336 XXXXXXXXXXXXXXXXPEDTYNRQQY 259
                            EDTY R+QY
Sbjct: 185 GQPQFPPQNTQQPVFVHEDTYARRQY 210


>ref|NP_001056606.1| Os06g0114700 [Oryza sativa Japonica Group]
           gi|7248408|dbj|BAA92731.1| unknown protein [Oryza sativa
           Japonica Group] gi|55296186|dbj|BAD67904.1| unknown
           protein [Oryza sativa Japonica Group]
           gi|113594646|dbj|BAF18520.1| Os06g0114700 [Oryza sativa
           Japonica Group] gi|215692581|dbj|BAG88001.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218197447|gb|EEC79874.1| hypothetical protein
           OsI_21376 [Oryza sativa Indica Group]
           gi|222634845|gb|EEE64977.1| hypothetical protein
           OsJ_19891 [Oryza sativa Japonica Group]
          Length = 205

 Score =  142 bits (358), Expect = 1e-31
 Identities = 83/204 (40%), Positives = 107/204 (52%)
 Frame = -3

Query: 867 VIVVCVTVXXXXXXXXXXXXXXXXXXXKGSQVQITALNTCTYPRSPXXXXXXXASVSLMI 688
           V+VVC  V                   K S VQ ++   C YPRSP       ++V+LM+
Sbjct: 5   VVVVCAVVGFLGVLSAALGFAAEGTRVKVSDVQTSSPGQCIYPRSPALALGLISAVALMV 64

Query: 687 AQMMINVAAGCICCERNRQPSNSRRTVALFSYVFSWFTFVIAFLLLLSGASLNDQHGEDG 508
           AQ +IN  AGCICC+R+  PS++  +VAL S++ SW TF+IAFLLLL+GA+LNDQ GE+ 
Sbjct: 65  AQSIINTVAGCICCKRHPVPSDTNWSVALISFIVSWATFIIAFLLLLTGAALNDQRGEEN 124

Query: 507 TYFGNYCYVLKXXXXXXXXXXXXXXXXXXXVYYLTLSSGKKHEQCGTPSYPNHGIAMXXX 328
            YFG++CYV+K                   VYY+ LSS K     G     N GIAM   
Sbjct: 125 MYFGSFCYVVKPGVFSGGAVLSLASVALAIVYYVALSSAKSPPNWGPQQ--NQGIAM-GQ 181

Query: 327 XXXXXXXXXXXXXPEDTYNRQQYP 256
                         EDTYNRQQ+P
Sbjct: 182 PVIPPQSSEPVFVHEDTYNRQQFP 205


>ref|XP_003557165.1| PREDICTED: uncharacterized protein LOC100840758 [Brachypodium
           distachyon]
          Length = 205

 Score =  142 bits (358), Expect = 1e-31
 Identities = 82/204 (40%), Positives = 107/204 (52%)
 Frame = -3

Query: 867 VIVVCVTVXXXXXXXXXXXXXXXXXXXKGSQVQITALNTCTYPRSPXXXXXXXASVSLMI 688
           V+VVC  V                   K S VQ  +   C YPRSP       ++V+L++
Sbjct: 5   VVVVCAVVGFLGVLSAALGFAAEGTRVKVSDVQTNSPGECIYPRSPALGLGLISAVTLVV 64

Query: 687 AQMMINVAAGCICCERNRQPSNSRRTVALFSYVFSWFTFVIAFLLLLSGASLNDQHGEDG 508
           AQ +IN  AGCICC+R+  PS++  +VAL S++ SW TF+IAFLLLL+GA+LNDQ GE+ 
Sbjct: 65  AQCIINTVAGCICCKRHPVPSDTNWSVALISFIVSWVTFIIAFLLLLTGAALNDQRGEEN 124

Query: 507 TYFGNYCYVLKXXXXXXXXXXXXXXXXXXXVYYLTLSSGKKHEQCGTPSYPNHGIAMXXX 328
            YFG++CYV+K                   VYY+ L+S K     G    PN GIAM   
Sbjct: 125 MYFGSFCYVVKPGVFSGGAVLSLASVALAIVYYVALTSSKSPPSWG--PQPNQGIAM-GQ 181

Query: 327 XXXXXXXXXXXXXPEDTYNRQQYP 256
                         EDTYNRQQ+P
Sbjct: 182 PVIPPQSSEPVFVHEDTYNRQQFP 205


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