BLASTX nr result

ID: Coptis23_contig00030940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030940
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001045991.1| Os02g0164600 [Oryza sativa Japonica Group] g...   110   2e-22
ref|XP_002327523.1| predicted protein [Populus trichocarpa] gi|2...   102   3e-20
ref|NP_001051728.1| Os03g0821700 [Oryza sativa Japonica Group] g...   101   7e-20
gb|AAO18456.1| hypothetical protein, 3'-partial [Oryza sativa Ja...   101   7e-20
gb|EAY92377.1| hypothetical protein OsI_14107 [Oryza sativa Indi...   101   7e-20

>ref|NP_001045991.1| Os02g0164600 [Oryza sativa Japonica Group]
           gi|49388051|dbj|BAD25165.1| putative pentatricopeptide
           (PPR) repeat-containing protein [Oryza sativa Japonica
           Group] gi|49388408|dbj|BAD25541.1| putative
           pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group] gi|113535522|dbj|BAF07905.1|
           Os02g0164600 [Oryza sativa Japonica Group]
           gi|125538213|gb|EAY84608.1| hypothetical protein
           OsI_05976 [Oryza sativa Indica Group]
           gi|125580926|gb|EAZ21857.1| hypothetical protein
           OsJ_05503 [Oryza sativa Japonica Group]
           gi|215737275|dbj|BAG96204.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 476

 Score =  110 bits (274), Expect = 2e-22
 Identities = 51/81 (62%), Positives = 65/81 (80%)
 Frame = +2

Query: 2   KDAYSWTAVIAGLAMNGCGTEAVKWFYQMKLVAGVVPDAVTFIAVLSACAHAGLLDEGVK 181
           KD +SWTA+I+GLA +G G EAV  F+ MK  AGV+PD+ TF+ VLSAC+HAGL+DEG+ 
Sbjct: 287 KDLHSWTAMISGLASHGHGKEAVALFFSMK-EAGVLPDSTTFVVVLSACSHAGLVDEGIS 345

Query: 182 IFESMEVEYGIVPEIQHYGCM 244
           IF SME EY + P+I+HYGCM
Sbjct: 346 IFNSMENEYKVTPDIKHYGCM 366


>ref|XP_002327523.1| predicted protein [Populus trichocarpa] gi|222836077|gb|EEE74498.1|
           predicted protein [Populus trichocarpa]
          Length = 635

 Score =  102 bits (254), Expect = 3e-20
 Identities = 46/81 (56%), Positives = 58/81 (71%)
 Frame = +2

Query: 2   KDAYSWTAVIAGLAMNGCGTEAVKWFYQMKLVAGVVPDAVTFIAVLSACAHAGLLDEGVK 181
           +D ++WTA++ GLA+NGCG EA+  F QM L A V PD VT++ VLSAC H G++DEG K
Sbjct: 327 RDKFTWTAMVVGLAINGCGEEALNMFSQM-LKASVTPDEVTYVGVLSACTHTGMVDEGKK 385

Query: 182 IFESMEVEYGIVPEIQHYGCM 244
            F SM   +GI P I HYGCM
Sbjct: 386 FFASMTARHGIEPNIAHYGCM 406


>ref|NP_001051728.1| Os03g0821700 [Oryza sativa Japonica Group]
           gi|29124127|gb|AAO65868.1| hypothetical protein [Oryza
           sativa Japonica Group] gi|108711802|gb|ABF99597.1|
           expressed protein [Oryza sativa Japonica Group]
           gi|113550199|dbj|BAF13642.1| Os03g0821700 [Oryza sativa
           Japonica Group] gi|125588431|gb|EAZ29095.1| hypothetical
           protein OsJ_13153 [Oryza sativa Japonica Group]
           gi|215736898|dbj|BAG95827.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 602

 Score =  101 bits (251), Expect = 7e-20
 Identities = 49/81 (60%), Positives = 62/81 (76%)
 Frame = +2

Query: 2   KDAYSWTAVIAGLAMNGCGTEAVKWFYQMKLVAGVVPDAVTFIAVLSACAHAGLLDEGVK 181
           +   SWT+VI  LAM G G EAV+ F +MK VAGV PD V FI VL+AC+HAG++DEG  
Sbjct: 294 RSVVSWTSVIDALAMEGRGKEAVRVFEEMK-VAGVPPDDVAFIGVLTACSHAGMVDEGCG 352

Query: 182 IFESMEVEYGIVPEIQHYGCM 244
            F++M+VEYGI P+I+HYGCM
Sbjct: 353 YFDAMKVEYGIEPKIEHYGCM 373


>gb|AAO18456.1| hypothetical protein, 3'-partial [Oryza sativa Japonica Group]
          Length = 382

 Score =  101 bits (251), Expect = 7e-20
 Identities = 49/81 (60%), Positives = 62/81 (76%)
 Frame = +2

Query: 2   KDAYSWTAVIAGLAMNGCGTEAVKWFYQMKLVAGVVPDAVTFIAVLSACAHAGLLDEGVK 181
           +   SWT+VI  LAM G G EAV+ F +MK VAGV PD V FI VL+AC+HAG++DEG  
Sbjct: 294 RSVVSWTSVIDALAMEGRGKEAVRVFEEMK-VAGVPPDDVAFIGVLTACSHAGMVDEGCG 352

Query: 182 IFESMEVEYGIVPEIQHYGCM 244
            F++M+VEYGI P+I+HYGCM
Sbjct: 353 YFDAMKVEYGIEPKIEHYGCM 373


>gb|EAY92377.1| hypothetical protein OsI_14107 [Oryza sativa Indica Group]
          Length = 602

 Score =  101 bits (251), Expect = 7e-20
 Identities = 49/81 (60%), Positives = 62/81 (76%)
 Frame = +2

Query: 2   KDAYSWTAVIAGLAMNGCGTEAVKWFYQMKLVAGVVPDAVTFIAVLSACAHAGLLDEGVK 181
           +   SWT+VI  LAM G G EAV+ F +MK VAGV PD V FI VL+AC+HAG++DEG  
Sbjct: 294 RSVVSWTSVIDALAMEGRGKEAVRVFEEMK-VAGVPPDDVAFIGVLTACSHAGMVDEGCG 352

Query: 182 IFESMEVEYGIVPEIQHYGCM 244
            F++M+VEYGI P+I+HYGCM
Sbjct: 353 YFDAMKVEYGIEPKIEHYGCM 373


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