BLASTX nr result

ID: Coptis23_contig00030938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030938
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW61855.1| putative leucine-rich repeat receptor-like protei...    83   3e-14
ref|XP_002445582.1| hypothetical protein SORBIDRAFT_07g021960 [S...    82   3e-14
ref|NP_001143723.1| uncharacterized protein LOC100276469 precurs...    82   3e-14
gb|ACF86786.1| unknown [Zea mays] gi|413921927|gb|AFW61859.1| hy...    82   3e-14
ref|NP_001117591.1| Leucine-rich repeat family protein [Arabidop...    82   4e-14

>gb|AFW61855.1| putative leucine-rich repeat receptor-like protein kinase family
           protein [Zea mays]
          Length = 1123

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 39/83 (46%), Positives = 56/83 (67%)
 Frame = -2

Query: 250 LLSLVKTLTLPXXXXXXXXXXXSTPCQWVGIVCDNRHRVISLNLSGQDISGQLGPEIGQL 71
           LL+L KTL LP           +TPC W G+ C+ R+RVISL+LS  ++SG +GPEIG+L
Sbjct: 29  LLALSKTLILPSFIRTNWSASDATPCTWNGVGCNGRNRVISLDLSSSEVSGFIGPEIGRL 88

Query: 70  RFIEVIDFGTNNLSGSIPSEVTN 2
           ++++V+    NN+SG IP E+ N
Sbjct: 89  KYLQVLILSANNISGLIPLELGN 111


>ref|XP_002445582.1| hypothetical protein SORBIDRAFT_07g021960 [Sorghum bicolor]
           gi|241941932|gb|EES15077.1| hypothetical protein
           SORBIDRAFT_07g021960 [Sorghum bicolor]
          Length = 778

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 38/83 (45%), Positives = 56/83 (67%)
 Frame = -2

Query: 250 LLSLVKTLTLPXXXXXXXXXXXSTPCQWVGIVCDNRHRVISLNLSGQDISGQLGPEIGQL 71
           LL+L K+L LP           +TPC W G+ C+ R+RVISL+LS   +SG +GP+IG+L
Sbjct: 29  LLALSKSLILPRSLRSNWSASDATPCTWNGVGCNGRNRVISLDLSSSQVSGSIGPDIGRL 88

Query: 70  RFIEVIDFGTNNLSGSIPSEVTN 2
           ++++V+   TNN+SG IP E+ N
Sbjct: 89  KYLQVLILSTNNISGLIPLELGN 111


>ref|NP_001143723.1| uncharacterized protein LOC100276469 precursor [Zea mays]
           gi|195625612|gb|ACG34636.1| hypothetical protein [Zea
           mays]
          Length = 489

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 39/83 (46%), Positives = 56/83 (67%)
 Frame = -2

Query: 250 LLSLVKTLTLPXXXXXXXXXXXSTPCQWVGIVCDNRHRVISLNLSGQDISGQLGPEIGQL 71
           LL+L KTL LP           +TPC W G+ C+ R+RVISL+LS  ++SG +GPEIG+L
Sbjct: 29  LLALSKTLILPSFIRTNWSGSDATPCTWNGVGCNGRNRVISLDLSSSEVSGFIGPEIGRL 88

Query: 70  RFIEVIDFGTNNLSGSIPSEVTN 2
           ++++V+    NN+SG IP E+ N
Sbjct: 89  KYMQVLILSANNISGLIPLELGN 111


>gb|ACF86786.1| unknown [Zea mays] gi|413921927|gb|AFW61859.1| hypothetical protein
           ZEAMMB73_093071 [Zea mays]
          Length = 184

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 39/83 (46%), Positives = 56/83 (67%)
 Frame = -2

Query: 250 LLSLVKTLTLPXXXXXXXXXXXSTPCQWVGIVCDNRHRVISLNLSGQDISGQLGPEIGQL 71
           LL+L KTL LP           +TPC W G+ C+ R+RVISL+LS  ++SG +GPEIG+L
Sbjct: 29  LLALSKTLILPSFIRTNWSGSDATPCTWNGVGCNGRNRVISLDLSSSEVSGFIGPEIGRL 88

Query: 70  RFIEVIDFGTNNLSGSIPSEVTN 2
           ++++V+    NN+SG IP E+ N
Sbjct: 89  KYMQVLILSANNISGLIPLELGN 111


>ref|NP_001117591.1| Leucine-rich repeat family protein [Arabidopsis thaliana]
           gi|5903096|gb|AAD55654.1|AC008017_27 Highly similar to
           receptor-like protein kinase [Arabidopsis thaliana]
           gi|26449861|dbj|BAC42053.1| unknown protein [Arabidopsis
           thaliana] gi|332197289|gb|AEE35410.1| Leucine-rich
           repeat family protein [Arabidopsis thaliana]
          Length = 598

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 34/60 (56%), Positives = 45/60 (75%)
 Frame = -2

Query: 181 TPCQWVGIVCDNRHRVISLNLSGQDISGQLGPEIGQLRFIEVIDFGTNNLSGSIPSEVTN 2
           TPC W GI+CD+  +V SLN +G  +SGQLGPEIGQL+ +E++D  +NN SG IPS + N
Sbjct: 60  TPCNWFGIICDDSKKVTSLNFTGSGVSGQLGPEIGQLKSLEILDMSSNNFSGIIPSSLGN 119


Top