BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030937
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522027.1| pentatricopeptide repeat-containing protein,...   225   5e-57
ref|XP_002268094.2| PREDICTED: uncharacterized protein LOC100241...   223   2e-56
ref|NP_187076.2| plastid transcriptionally active 3 [Arabidopsis...   218   6e-55
ref|XP_004142596.1| PREDICTED: uncharacterized protein LOC101209...   216   2e-54
ref|XP_002884436.1| hypothetical protein ARALYDRAFT_477686 [Arab...   214   1e-53

>ref|XP_002522027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223538831|gb|EEF40431.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 889

 Score =  225 bits (573), Expect = 5e-57
 Identities = 110/156 (70%), Positives = 126/156 (80%)
 Frame = +1

Query: 1    DMQEAFKMMRERKVFDESDMYTIADVWGWTWDREIKKRPPQKWSQXXXXXXXXXXXXXXX 180
            D  EAFK +RERKVFD  DMYTIADVWGWTW+REIK RPPQKWSQ               
Sbjct: 730  DPFEAFKELRERKVFDVEDMYTIADVWGWTWEREIKNRPPQKWSQEWEVELAIKLMLKAQ 789

Query: 181  XXGSKPTIGDCAMILRAAIKAPLPTAFFKILQTTHSLGYAFGSPLYDEMILLCLDLGELD 360
              G+ PTIGDCAMILRAAI+AP+P+AF KILQTTHSLGY FGSPLYDE+I LCLD+GELD
Sbjct: 790  LSGT-PTIGDCAMILRAAIRAPMPSAFLKILQTTHSLGYTFGSPLYDEVISLCLDIGELD 848

Query: 361  AAIAIVAEMETAGIQVPDQTLDRVLSSRQSIDSPVE 468
            AAIAIVA++E+ GI VPDQTLDRV+S+RQ+ D+PV+
Sbjct: 849  AAIAIVADLESTGITVPDQTLDRVISARQAADNPVD 884


>ref|XP_002268094.2| PREDICTED: uncharacterized protein LOC100241547 [Vitis vinifera]
            gi|296085161|emb|CBI28656.3| unnamed protein product
            [Vitis vinifera]
          Length = 884

 Score =  223 bits (568), Expect = 2e-56
 Identities = 104/153 (67%), Positives = 124/153 (81%)
 Frame = +1

Query: 1    DMQEAFKMMRERKVFDESDMYTIADVWGWTWDREIKKRPPQKWSQXXXXXXXXXXXXXXX 180
            D+ EAFK MRERK+FD SDMYTIADVWGWTW++E+K +PP+ W+Q               
Sbjct: 722  DIHEAFKEMRERKIFDVSDMYTIADVWGWTWEKELKNKPPRSWTQEWEVELAIKVMLKVI 781

Query: 181  XXGSKPTIGDCAMILRAAIKAPLPTAFFKILQTTHSLGYAFGSPLYDEMILLCLDLGELD 360
              G  PTIGDCAMILRAAI+APLP+AF K+LQTTH LGY FGSPLY+E+I+LCLDLGELD
Sbjct: 782  ELGGTPTIGDCAMILRAAIRAPLPSAFLKVLQTTHKLGYVFGSPLYNEVIILCLDLGELD 841

Query: 361  AAIAIVAEMETAGIQVPDQTLDRVLSSRQSIDS 459
            AAIAIVA+MET+GI VPD+TLDRV+S+RQ ID+
Sbjct: 842  AAIAIVADMETSGIAVPDETLDRVISARQMIDT 874


>ref|NP_187076.2| plastid transcriptionally active 3 [Arabidopsis thaliana]
            gi|332640537|gb|AEE74058.1| plastid transcriptionally
            active 3 [Arabidopsis thaliana]
          Length = 910

 Score =  218 bits (555), Expect = 6e-55
 Identities = 104/151 (68%), Positives = 122/151 (80%)
 Frame = +1

Query: 10   EAFKMMRERKVFDESDMYTIADVWGWTWDREIKKRPPQKWSQXXXXXXXXXXXXXXXXXG 189
            EAFK MRERKVFD +DMYTIADVWGWTW+++ K + P+KWSQ                 G
Sbjct: 747  EAFKEMRERKVFDVADMYTIADVWGWTWEKDFKNKTPRKWSQEWEVELAIVLMTKVIELG 806

Query: 190  SKPTIGDCAMILRAAIKAPLPTAFFKILQTTHSLGYAFGSPLYDEMILLCLDLGELDAAI 369
              PTIGDCA+ILRAA++AP+P+AF KILQTTHSLGY+FGSPLYDE+I LCLDLGELDAAI
Sbjct: 807  GIPTIGDCAVILRAALRAPMPSAFLKILQTTHSLGYSFGSPLYDEIITLCLDLGELDAAI 866

Query: 370  AIVAEMETAGIQVPDQTLDRVLSSRQSIDSP 462
            AIVA+MET GI VPDQTLD+V+S+RQS +SP
Sbjct: 867  AIVADMETTGITVPDQTLDKVISARQSNESP 897


>ref|XP_004142596.1| PREDICTED: uncharacterized protein LOC101209618 [Cucumis sativus]
          Length = 1177

 Score =  216 bits (551), Expect = 2e-54
 Identities = 105/153 (68%), Positives = 122/153 (79%)
 Frame = +1

Query: 1    DMQEAFKMMRERKVFDESDMYTIADVWGWTWDREIKKRPPQKWSQXXXXXXXXXXXXXXX 180
            D+ EAFK +++RKVFD SDMYTIADVWGWTW+RE+K RPP++WSQ               
Sbjct: 1002 DIFEAFKELQKRKVFDVSDMYTIADVWGWTWERELKNRPPRRWSQEWEVELAIKIMHKVI 1061

Query: 181  XXGSKPTIGDCAMILRAAIKAPLPTAFFKILQTTHSLGYAFGSPLYDEMILLCLDLGELD 360
              G  PTIGDCAMILRAAIKAPLP+AF KILQTTH LGY FGSPLYDE+I LCLDLGELD
Sbjct: 1062 ELGGIPTIGDCAMILRAAIKAPLPSAFLKILQTTHGLGYVFGSPLYDEVITLCLDLGELD 1121

Query: 361  AAIAIVAEMETAGIQVPDQTLDRVLSSRQSIDS 459
            AAIAIVA++ET GI V D+TLDRV+S+RQ+ D+
Sbjct: 1122 AAIAIVADLETTGILVHDETLDRVISARQTNDA 1154


>ref|XP_002884436.1| hypothetical protein ARALYDRAFT_477686 [Arabidopsis lyrata subsp.
            lyrata] gi|297330276|gb|EFH60695.1| hypothetical protein
            ARALYDRAFT_477686 [Arabidopsis lyrata subsp. lyrata]
          Length = 914

 Score =  214 bits (544), Expect = 1e-53
 Identities = 105/156 (67%), Positives = 123/156 (78%), Gaps = 2/156 (1%)
 Frame = +1

Query: 1    DMQEAFKMMRERKVFDESDMYTIADVWGWTWDREIKKRPPQKWSQXXXXXXXXXXXXXXX 180
            D  EAFK MRERKVFD SDMYTIADVWGWTW+++ K R P+KWSQ               
Sbjct: 746  DPFEAFKEMRERKVFDVSDMYTIADVWGWTWEKDFKNRTPRKWSQEWEVELAIVLMTKAR 805

Query: 181  XX--GSKPTIGDCAMILRAAIKAPLPTAFFKILQTTHSLGYAFGSPLYDEMILLCLDLGE 354
                G  PTIGDCA+ILRAA++AP+P+AF KILQTTHSLGY+FGSPLYDE+I LCLD+GE
Sbjct: 806  VIELGGIPTIGDCAVILRAALRAPMPSAFLKILQTTHSLGYSFGSPLYDEIITLCLDIGE 865

Query: 355  LDAAIAIVAEMETAGIQVPDQTLDRVLSSRQSIDSP 462
            LDAAIAIVA+MET GI VPDQTLD+V+S+RQS ++P
Sbjct: 866  LDAAIAIVADMETTGITVPDQTLDKVISARQSNENP 901