BLASTX nr result

ID: Coptis23_contig00030935 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030935
         (782 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002334089.1| predicted protein [Populus trichocarpa] gi|2...    39   5e-06

>ref|XP_002334089.1| predicted protein [Populus trichocarpa] gi|222839595|gb|EEE77932.1|
           predicted protein [Populus trichocarpa]
          Length = 385

 Score = 38.9 bits (89), Expect(2) = 5e-06
 Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
 Frame = -1

Query: 695 LPTFSIPTIANFVIVIKMNDDNFLLWSRQIEVFLIGWDLY*FVDGSYK----CLTTTDS- 531
           + T S     N     K+ + N+L W +QI+ +L G  L+ +VDG+       + TTD+ 
Sbjct: 1   MATISSALSQNIAQFTKLTETNYLTWLQQIKPYLHGAKLWGYVDGTIPEPSLTILTTDTQ 60

Query: 530 --------GYTVWLHTDTNLLSILSVTIT 468
                    +  W   D  ++SIL+ T+T
Sbjct: 61  STRSIPNPDHASWFIIDQQIVSILTTTLT 89



 Score = 37.7 bits (86), Expect(2) = 5e-06
 Identities = 20/56 (35%), Positives = 34/56 (60%)
 Frame = -2

Query: 445 GCQNSTAI*SRLQE*FSHKYVVNSSQIRRNLNEISRGTCSLSEYLQ*AKTYTDALL 278
           G   S AI   L+  FS K V +++ ++  L ++++GT S+  YL+ AK+  DAL+
Sbjct: 98  GFDTSKAIWDCLERHFSQKSVASATNLKMQLLDLNKGTQSVDTYLRHAKSIADALI 153


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