BLASTX nr result

ID: Coptis23_contig00030929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030929
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325717.1| nbs-lrr resistance protein [Populus trichoca...    96   4e-18
ref|XP_003613519.1| Leucine-rich repeat protein soc-2-like prote...    94   1e-17
ref|XP_003543829.1| PREDICTED: putative disease resistance prote...    94   2e-17
ref|XP_003598762.1| Cc-nbs-lrr resistance protein [Medicago trun...    93   3e-17
emb|CAN80064.1| hypothetical protein VITISV_035224 [Vitis vinifera]    92   3e-17

>ref|XP_002325717.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222862592|gb|EEF00099.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 984

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 57/128 (44%), Positives = 80/128 (62%), Gaps = 1/128 (0%)
 Frame = +2

Query: 5   VLEGLQPNTNLKALCIESYHGAKFPFWMSSNTVLSNLVRLRLYNCSECLQLPPLGRLASL 184
           VL+ LQP+ ++++L IE Y G KFP WMS    L+NL+ LRL +CS C QLP LG  + L
Sbjct: 530 VLDALQPHPDIRSLTIEGYWGEKFPSWMSM-LQLNNLMVLRLKDCSNCRQLPILGCFSRL 588

Query: 185 EVLTLNNLESVKRIGYELYGLGTDNSGNNGVHSVQPEVRFPKLKKLEILNLEVCEEWDIP 364
           E+L ++ + +VK IG ELY     +SG+        EV FP LK+L +L ++  EEW +P
Sbjct: 589 EILEMSGMPNVKCIGNELY----SSSGST-------EVLFPALKELSLLGMDGLEEWMVP 637

Query: 365 F-ENDRNF 385
             E D+ F
Sbjct: 638 CGEGDQVF 645


>ref|XP_003613519.1| Leucine-rich repeat protein soc-2-like protein [Medicago truncatula]
            gi|355514854|gb|AES96477.1| Leucine-rich repeat protein
            soc-2-like protein [Medicago truncatula]
          Length = 1186

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 52/119 (43%), Positives = 74/119 (62%)
 Frame = +2

Query: 5    VLEGLQPNTNLKALCIESYHGAKFPFWMSSNTVLSNLVRLRLYNCSECLQLPPLGRLASL 184
            VLE L+P+TNLK+L I+ Y G  FP W+  + + SN++ LR+ NC  CL LPPLG+L +L
Sbjct: 707  VLENLRPSTNLKSLTIKGYGGISFPNWLG-DILFSNMMSLRISNCDACLWLPPLGQLGNL 765

Query: 185  EVLTLNNLESVKRIGYELYGLGTDNSGNNGVHSVQPEVRFPKLKKLEILNLEVCEEWDI 361
            + L +  ++S++ IG E Y  G+D S      S QP   FP L  L   ++E  EEWD+
Sbjct: 766  KELIIKGMQSIQTIGTEFY--GSDRS------SFQP---FPSLVTLHFEDMEEWEEWDL 813


>ref|XP_003543829.1| PREDICTED: putative disease resistance protein At3g14460-like
            [Glycine max]
          Length = 1236

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 51/127 (40%), Positives = 77/127 (60%)
 Frame = +2

Query: 5    VLEGLQPNTNLKALCIESYHGAKFPFWMSSNTVLSNLVRLRLYNCSECLQLPPLGRLASL 184
            VL+ LQP+TNLK L I+ Y G  FP W+  ++  SN++ LR+ +C+ CL LP  G+L SL
Sbjct: 739  VLDNLQPSTNLKKLDIKYYGGTSFPNWIGDSS-FSNIIVLRISDCNNCLTLPSFGQLPSL 797

Query: 185  EVLTLNNLESVKRIGYELYGLGTDNSGNNGVHSVQPEVRFPKLKKLEILNLEVCEEWDIP 364
            + L +  ++ VK +GYE Y      S N G   +QP   FP L+ LE  ++   +EW +P
Sbjct: 798  KELVVKRMKMVKTVGYEFY------SSNGGSQLLQP---FPSLESLEFEDMLEWQEW-LP 847

Query: 365  FENDRNF 385
            FE + ++
Sbjct: 848  FEGEGSY 854


>ref|XP_003598762.1| Cc-nbs-lrr resistance protein [Medicago truncatula]
            gi|355487810|gb|AES69013.1| Cc-nbs-lrr resistance protein
            [Medicago truncatula]
          Length = 1431

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 50/119 (42%), Positives = 78/119 (65%)
 Frame = +2

Query: 5    VLEGLQPNTNLKALCIESYHGAKFPFWMSSNTVLSNLVRLRLYNCSECLQLPPLGRLASL 184
            VLE L+P+TNLK+L I+ Y G  FP W+  +++ +N++ LR+ NC +CL LPPLG+L +L
Sbjct: 898  VLEHLRPSTNLKSLTIKGYGGINFPNWLG-DSLFTNMMYLRISNCGDCLWLPPLGQLGNL 956

Query: 185  EVLTLNNLESVKRIGYELYGLGTDNSGNNGVHSVQPEVRFPKLKKLEILNLEVCEEWDI 361
            + L +  ++S++ IG E Y  G+D+S      S QP   FP L+ L   N++  EEW++
Sbjct: 957  KELIIEGMQSIQIIGTEFY--GSDSS-----PSFQP---FPSLETLHFENMQEWEEWNL 1005


>emb|CAN80064.1| hypothetical protein VITISV_035224 [Vitis vinifera]
          Length = 1289

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 51/118 (43%), Positives = 71/118 (60%)
 Frame = +2

Query: 5    VLEGLQPNTNLKALCIESYHGAKFPFWMSSNTVLSNLVRLRLYNCSECLQLPPLGRLASL 184
            VLE LQP++NLK L I  Y+GAKFP W+   + + N+VRL+L NC  C  LPPLG+L SL
Sbjct: 724  VLEKLQPHSNLKELSIRCYYGAKFPSWLGEPSFI-NMVRLQLSNCKNCASLPPLGQLRSL 782

Query: 185  EVLTLNNLESVKRIGYELYGLGTDNSGNNGVHSVQPEVRFPKLKKLEILNLEVCEEWD 358
            + L++   + ++++G E YG        NG  S +P   F  L+ L    + V EEWD
Sbjct: 783  QNLSIVKNDVLQKVGQEFYG--------NGPSSFKP---FGSLQTLVFKEISVWEEWD 829


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