BLASTX nr result

ID: Coptis23_contig00030923 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030923
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303543.1| predicted protein [Populus trichocarpa] gi|2...   304   6e-81
ref|XP_002509644.1| leucine-rich repeat transmembrane protein ki...   302   2e-80
ref|XP_002299581.1| predicted protein [Populus trichocarpa] gi|2...   301   5e-80
ref|XP_002275029.2| PREDICTED: probable LRR receptor-like serine...   297   5e-79
emb|CBI23559.3| unnamed protein product [Vitis vinifera]              297   5e-79

>ref|XP_002303543.1| predicted protein [Populus trichocarpa] gi|222840975|gb|EEE78522.1|
            predicted protein [Populus trichocarpa]
          Length = 883

 Score =  304 bits (778), Expect = 6e-81
 Identities = 144/172 (83%), Positives = 158/172 (91%)
 Frame = -3

Query: 523  SLPSKYEDWEAGTKALLDKECMVGGGSIGTVYRASFEGGVFIAVKKLETLGRIRSQDEFE 344
            +LPSKYEDWEAGTKALLDKEC++GGGSIGTVYR +FEGGV IAVKKLETLGRIRSQDEFE
Sbjct: 583  TLPSKYEDWEAGTKALLDKECLIGGGSIGTVYRTTFEGGVSIAVKKLETLGRIRSQDEFE 642

Query: 343  QEIGRLGNLVHPNLVAFQGYYWSVTMQLILSEFIPNGNLYQHLHGHIHPGPSTSSGGSDL 164
            QEIG LGNL HPNLVAFQGYYWS TMQLILSEF+PNGNLY +LHG  +PG ST  G  +L
Sbjct: 643  QEIGLLGNLRHPNLVAFQGYYWSSTMQLILSEFVPNGNLYDNLHGLNYPGTSTGVGNREL 702

Query: 163  YWSRRFQIALGVARALAYLHHDCKPQVLHLNIKSTNILLDEDFEAKLSDYGL 8
            YWSRRFQIALG+ARAL+YLHHDC+P +LHLNIKSTNILLDE++EAKLSDYGL
Sbjct: 703  YWSRRFQIALGIARALSYLHHDCRPPILHLNIKSTNILLDENYEAKLSDYGL 754


>ref|XP_002509644.1| leucine-rich repeat transmembrane protein kinase, putative [Ricinus
            communis] gi|223549543|gb|EEF51031.1| leucine-rich repeat
            transmembrane protein kinase, putative [Ricinus communis]
          Length = 884

 Score =  302 bits (773), Expect = 2e-80
 Identities = 141/172 (81%), Positives = 159/172 (92%)
 Frame = -3

Query: 523  SLPSKYEDWEAGTKALLDKECMVGGGSIGTVYRASFEGGVFIAVKKLETLGRIRSQDEFE 344
            +LPSKYEDWEAGTKALLDKEC++GGGS+GTVYR +FEGG+ IAVKKLETLGRIRSQDEFE
Sbjct: 580  TLPSKYEDWEAGTKALLDKECLIGGGSVGTVYRTNFEGGISIAVKKLETLGRIRSQDEFE 639

Query: 343  QEIGRLGNLVHPNLVAFQGYYWSVTMQLILSEFIPNGNLYQHLHGHIHPGPSTSSGGSDL 164
            QEIGRLGNL HPNLVAFQGYYWS TMQL+LSEF+PNG+LY +LHG  +PG ST  G S+L
Sbjct: 640  QEIGRLGNLRHPNLVAFQGYYWSSTMQLLLSEFVPNGSLYDNLHGLDYPGTSTGVGNSEL 699

Query: 163  YWSRRFQIALGVARALAYLHHDCKPQVLHLNIKSTNILLDEDFEAKLSDYGL 8
            +WSRRFQIALG ARAL+YLHHDC+P +LHLNIKSTNILLDE++EAKLSDYGL
Sbjct: 700  HWSRRFQIALGTARALSYLHHDCRPPILHLNIKSTNILLDENYEAKLSDYGL 751


>ref|XP_002299581.1| predicted protein [Populus trichocarpa] gi|222846839|gb|EEE84386.1|
            predicted protein [Populus trichocarpa]
          Length = 887

 Score =  301 bits (770), Expect = 5e-80
 Identities = 145/174 (83%), Positives = 158/174 (90%)
 Frame = -3

Query: 523  SLPSKYEDWEAGTKALLDKECMVGGGSIGTVYRASFEGGVFIAVKKLETLGRIRSQDEFE 344
            +LPSKYEDWEAGTKALLDKEC++GGGSIGTVYR +FEGGV IAVKKLETLGRIRSQDEFE
Sbjct: 583  TLPSKYEDWEAGTKALLDKECLIGGGSIGTVYRTTFEGGVCIAVKKLETLGRIRSQDEFE 642

Query: 343  QEIGRLGNLVHPNLVAFQGYYWSVTMQLILSEFIPNGNLYQHLHGHIHPGPSTSSGGSDL 164
            QEIGRLGNL HPNLVAFQGYYWS TMQLILSEFIP+GNLY +LHG  +PG ST  G  +L
Sbjct: 643  QEIGRLGNLRHPNLVAFQGYYWSSTMQLILSEFIPHGNLYDNLHGLNYPGTSTGVGNREL 702

Query: 163  YWSRRFQIALGVARALAYLHHDCKPQVLHLNIKSTNILLDEDFEAKLSDYGLVK 2
            YWSRRFQIAL  ARAL+YLHHDC+P +LHLNIKSTNILLDE++EAKLSDYGL K
Sbjct: 703  YWSRRFQIALLTARALSYLHHDCRPPILHLNIKSTNILLDENYEAKLSDYGLGK 756


>ref|XP_002275029.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g12460-like, partial [Vitis vinifera]
          Length = 491

 Score =  297 bits (761), Expect = 5e-79
 Identities = 142/174 (81%), Positives = 156/174 (89%)
 Frame = -3

Query: 523 SLPSKYEDWEAGTKALLDKECMVGGGSIGTVYRASFEGGVFIAVKKLETLGRIRSQDEFE 344
           SLPSKYEDWEAGTKALLDK+ ++GGGSIGTVY+ +FEGG+ IAVKKLE LGRIRSQDEFE
Sbjct: 188 SLPSKYEDWEAGTKALLDKDSLIGGGSIGTVYKTTFEGGISIAVKKLEFLGRIRSQDEFE 247

Query: 343 QEIGRLGNLVHPNLVAFQGYYWSVTMQLILSEFIPNGNLYQHLHGHIHPGPSTSSGGSDL 164
            EIGRLGNL HPNLVAFQGYYWS TMQLILSEF+PNGNLY +LHG  +PG ST  G S+L
Sbjct: 248 HEIGRLGNLQHPNLVAFQGYYWSSTMQLILSEFVPNGNLYDNLHGLNYPGTSTGVGNSEL 307

Query: 163 YWSRRFQIALGVARALAYLHHDCKPQVLHLNIKSTNILLDEDFEAKLSDYGLVK 2
           YWSRRFQIALG ARALAYLHHDC+P +LHLNIKS+NILLDE +EAKLSDYGL K
Sbjct: 308 YWSRRFQIALGTARALAYLHHDCRPPILHLNIKSSNILLDEKYEAKLSDYGLGK 361


>emb|CBI23559.3| unnamed protein product [Vitis vinifera]
          Length = 483

 Score =  297 bits (761), Expect = 5e-79
 Identities = 142/174 (81%), Positives = 156/174 (89%)
 Frame = -3

Query: 523 SLPSKYEDWEAGTKALLDKECMVGGGSIGTVYRASFEGGVFIAVKKLETLGRIRSQDEFE 344
           SLPSKYEDWEAGTKALLDK+ ++GGGSIGTVY+ +FEGG+ IAVKKLE LGRIRSQDEFE
Sbjct: 180 SLPSKYEDWEAGTKALLDKDSLIGGGSIGTVYKTTFEGGISIAVKKLEFLGRIRSQDEFE 239

Query: 343 QEIGRLGNLVHPNLVAFQGYYWSVTMQLILSEFIPNGNLYQHLHGHIHPGPSTSSGGSDL 164
            EIGRLGNL HPNLVAFQGYYWS TMQLILSEF+PNGNLY +LHG  +PG ST  G S+L
Sbjct: 240 HEIGRLGNLQHPNLVAFQGYYWSSTMQLILSEFVPNGNLYDNLHGLNYPGTSTGVGNSEL 299

Query: 163 YWSRRFQIALGVARALAYLHHDCKPQVLHLNIKSTNILLDEDFEAKLSDYGLVK 2
           YWSRRFQIALG ARALAYLHHDC+P +LHLNIKS+NILLDE +EAKLSDYGL K
Sbjct: 300 YWSRRFQIALGTARALAYLHHDCRPPILHLNIKSSNILLDEKYEAKLSDYGLGK 353


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