BLASTX nr result

ID: Coptis23_contig00030922 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030922
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316252.1| predicted protein [Populus trichocarpa] gi|2...   127   7e-28
ref|XP_002316254.1| predicted protein [Populus trichocarpa] gi|2...   127   9e-28
ref|XP_002281790.2| PREDICTED: cucumisin-like [Vitis vinifera]        126   2e-27
emb|CBI31594.3| unnamed protein product [Vitis vinifera]              126   2e-27
ref|XP_002316251.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-27

>ref|XP_002316252.1| predicted protein [Populus trichocarpa] gi|222865292|gb|EEF02423.1|
           predicted protein [Populus trichocarpa]
          Length = 701

 Score =  127 bits (320), Expect = 7e-28
 Identities = 60/92 (65%), Positives = 74/92 (80%)
 Frame = +2

Query: 2   NTKNPVATILKAEELKNANAPVVVSFSSRGPNPITRAILKPDISAPGVEILAAWPQALSA 181
           +T  P ATI+K+ E+K+  AP VVSFSSRGPNPIT  +LKPD++APGV ILAAW +A + 
Sbjct: 420 STSEPTATIMKSIEIKDETAPFVVSFSSRGPNPITSDLLKPDLTAPGVHILAAWSEATTV 479

Query: 182 TGIFGDKRFLKYNFLSGTSMACPHATGAAAYV 277
           TG  GD R +KYN +SGTSM+CPHA+GAAAYV
Sbjct: 480 TGSPGDTRVVKYNIISGTSMSCPHASGAAAYV 511


>ref|XP_002316254.1| predicted protein [Populus trichocarpa] gi|222865294|gb|EEF02425.1|
           predicted protein [Populus trichocarpa]
          Length = 697

 Score =  127 bits (319), Expect = 9e-28
 Identities = 60/92 (65%), Positives = 74/92 (80%)
 Frame = +2

Query: 2   NTKNPVATILKAEELKNANAPVVVSFSSRGPNPITRAILKPDISAPGVEILAAWPQALSA 181
           +T  P ATI+K+ E K+  AP VVSFSSRGPNPIT  +LKPD++APGV+ILAAW +A + 
Sbjct: 413 STSEPTATIMKSIETKDETAPFVVSFSSRGPNPITSDLLKPDLTAPGVDILAAWSEATTV 472

Query: 182 TGIFGDKRFLKYNFLSGTSMACPHATGAAAYV 277
           TG  GD R +KYN +SGTSM+CPHA+GAAAYV
Sbjct: 473 TGSPGDTRVVKYNIISGTSMSCPHASGAAAYV 504


>ref|XP_002281790.2| PREDICTED: cucumisin-like [Vitis vinifera]
          Length = 724

 Score =  126 bits (317), Expect = 2e-27
 Identities = 63/92 (68%), Positives = 70/92 (76%)
 Frame = +2

Query: 2   NTKNPVATILKAEELKNANAPVVVSFSSRGPNPITRAILKPDISAPGVEILAAWPQALSA 181
           +T  P A I K  E KN  AP VVSFSSRGPNPITR IL PDI+APGV+ILAAW  A S 
Sbjct: 440 STSTPTANIQKTTEAKNELAPFVVSFSSRGPNPITRDILSPDIAAPGVDILAAWTGASSL 499

Query: 182 TGIFGDKRFLKYNFLSGTSMACPHATGAAAYV 277
           TG+ GD R + YN +SGTSMACPHA+GAAAYV
Sbjct: 500 TGVPGDTRVVPYNIISGTSMACPHASGAAAYV 531


>emb|CBI31594.3| unnamed protein product [Vitis vinifera]
          Length = 1497

 Score =  126 bits (317), Expect = 2e-27
 Identities = 63/92 (68%), Positives = 70/92 (76%)
 Frame = +2

Query: 2    NTKNPVATILKAEELKNANAPVVVSFSSRGPNPITRAILKPDISAPGVEILAAWPQALSA 181
            +T  P A I K  E KN  AP VVSFSSRGPNPITR IL PDI+APGV+ILAAW  A S 
Sbjct: 1194 STSTPTANIQKTTEAKNELAPFVVSFSSRGPNPITRDILSPDIAAPGVDILAAWTGASSL 1253

Query: 182  TGIFGDKRFLKYNFLSGTSMACPHATGAAAYV 277
            TG+ GD R + YN +SGTSMACPHA+GAAAYV
Sbjct: 1254 TGVPGDTRVVPYNIISGTSMACPHASGAAAYV 1285



 Score =  116 bits (290), Expect = 2e-24
 Identities = 55/92 (59%), Positives = 69/92 (75%)
 Frame = +2

Query: 2   NTKNPVATILKAEELKNANAPVVVSFSSRGPNPITRAILKPDISAPGVEILAAWPQALSA 181
           +  N  A I ++  +K  +AP+V SFSSRGPNP+T  IL PDI+APGV+ILAAW +A   
Sbjct: 467 SASNATAKIERSIAVKEESAPIVASFSSRGPNPVTTDILSPDITAPGVQILAAWTEASPL 526

Query: 182 TGIFGDKRFLKYNFLSGTSMACPHATGAAAYV 277
           T + GDKR  KYN +SGTSM+CPHA+GAAAYV
Sbjct: 527 TDVPGDKRVAKYNIISGTSMSCPHASGAAAYV 558


>ref|XP_002316251.1| predicted protein [Populus trichocarpa] gi|222865291|gb|EEF02422.1|
           predicted protein [Populus trichocarpa]
          Length = 671

 Score =  125 bits (314), Expect = 4e-27
 Identities = 57/92 (61%), Positives = 74/92 (80%)
 Frame = +2

Query: 2   NTKNPVATILKAEELKNANAPVVVSFSSRGPNPITRAILKPDISAPGVEILAAWPQALSA 181
           + + P ATI K+ + ++  AP VVSFSSRGPNPIT  I+KPD++APG +ILAAWPQ  + 
Sbjct: 387 DARKPTATIFKSIQREDDLAPYVVSFSSRGPNPITSDIIKPDLAAPGADILAAWPQGNTV 446

Query: 182 TGIFGDKRFLKYNFLSGTSMACPHATGAAAYV 277
           TG+ GD+R ++YN +SGTSMACPHATGAAAY+
Sbjct: 447 TGLQGDRRVVRYNIISGTSMACPHATGAAAYI 478


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