BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030921
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273254.1| PREDICTED: uncharacterized protein LOC100255...    83   3e-14
emb|CAN81051.1| hypothetical protein VITISV_024737 [Vitis vinifera]    83   3e-14
ref|XP_002877284.1| tubulin family protein [Arabidopsis lyrata s...    57   3e-06
ref|NP_189947.2| Spc97 / Spc98 family of spindle pole body (SBP)...    56   3e-06
emb|CAC05635.1| putative protein [Arabidopsis thaliana]                56   3e-06

>ref|XP_002273254.1| PREDICTED: uncharacterized protein LOC100255993 [Vitis vinifera]
          Length = 1239

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 58/165 (35%), Positives = 83/165 (50%), Gaps = 7/165 (4%)
 Frame = +1

Query: 37   ETAFGDYQSVNCWPLGGLLKNPFCD---GVVPKGESQSHVTGSSLEVLGRIEEVFMNKVS 207
            E  +   Q  + WPLGGLLKNPF D     +P  E    ++  ++ VL   +      +S
Sbjct: 623  EDQYAGNQHGSSWPLGGLLKNPFNDINKTNLPSSECGIKMSNRNVGVLKEED------IS 676

Query: 208  YFAELFASGESSPQQARGNIQLENGTQASSTSYFLPLSKLNYNCNIFNINPMLTKNCWCD 387
            +F +   +  S   +A    Q EN T AS  S+      L Y+CNI ++NPMLTK+ +  
Sbjct: 677  HFGKKIDTYNSLAVKANDKDQHENRTYASPNSFNSQSWNLKYHCNILSMNPMLTKSGFLH 736

Query: 388  MMEKLGG----DHKQSFVSYFDFSSVEDPRMVYRERSIPTPGHGY 510
             M   GG    DH +SF  + DFS VEDP  +  E+   + GHG+
Sbjct: 737  TMSNPGGRHSSDHGESF-PFLDFSYVEDPLKLCVEKLNVSSGHGF 780


>emb|CAN81051.1| hypothetical protein VITISV_024737 [Vitis vinifera]
          Length = 1070

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 58/165 (35%), Positives = 83/165 (50%), Gaps = 7/165 (4%)
 Frame = +1

Query: 37   ETAFGDYQSVNCWPLGGLLKNPFCD---GVVPKGESQSHVTGSSLEVLGRIEEVFMNKVS 207
            E  +   Q  + WPLGGLLKNPF D     +P  E    ++  ++ VL   +      +S
Sbjct: 739  EDQYAGNQHGSSWPLGGLLKNPFNDINKTNLPSSECGIKMSNRNVGVLKEED------IS 792

Query: 208  YFAELFASGESSPQQARGNIQLENGTQASSTSYFLPLSKLNYNCNIFNINPMLTKNCWCD 387
            +F +   +  S   +A    Q EN T AS  S+      L Y+CNI ++NPMLTK+ +  
Sbjct: 793  HFGKKIDTYNSLAVKANDKDQHENRTYASPNSFNSQSWNLKYHCNILSMNPMLTKSGFLH 852

Query: 388  MMEKLGG----DHKQSFVSYFDFSSVEDPRMVYRERSIPTPGHGY 510
             M   GG    DH +SF  + DFS VEDP  +  E+   + GHG+
Sbjct: 853  TMSNPGGRHSSDHGESF-PFXDFSYVEDPLKLCVEKLNVSSGHGF 896


>ref|XP_002877284.1| tubulin family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297323122|gb|EFH53543.1| tubulin family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1211

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 16/150 (10%)
 Frame = +1

Query: 61   SVNCWPLGGLLKNPFC--------DGVVPKGES-----QSHVTGSSLEVLGRIEEVFMNK 201
            S+  WPLGGL KNPFC        D   P+ +S     Q H+  +         ++F+N 
Sbjct: 615  SIKSWPLGGLPKNPFCVDKKSAEDDREDPRNDSGAMTEQRHLMNTD------EGKLFLNN 668

Query: 202  VSYFAELFASGESSPQQARGNIQLENGTQASSTSYFLPLSKLNYNCNIFNINPMLTKNCW 381
            +S       SG  S  + R ++ LEN    SS    +  +K+NY   + ++NP+L     
Sbjct: 669  IS------TSGSCSKHERRHDL-LEN--FLSSKLDLIKDTKVNYPYEVLSMNPLLR---- 715

Query: 382  CDMMEKLGGDHKQS---FVSYFDFSSVEDP 462
            CD + K G  ++++    + +FDFS+V+DP
Sbjct: 716  CDFLRKHGNTNRRNQGKSLPWFDFSAVDDP 745


>ref|NP_189947.2| Spc97 / Spc98 family of spindle pole body (SBP) component
            [Arabidopsis thaliana] gi|332644292|gb|AEE77813.1| Spc97
            / Spc98 family of spindle pole body (SBP) component
            [Arabidopsis thaliana]
          Length = 1207

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 10/143 (6%)
 Frame = +1

Query: 64   VNCWPLGGLLKNPFC---DGVVPKGESQSHVTGSSLEVLGRI----EEVFMNKVSYFAEL 222
            +  WPLGGL +NPFC          E   + +G+ +E    +     ++F+N +S     
Sbjct: 616  IKSWPLGGLPRNPFCVDKKSADDDSEDPRNYSGARMEQRHLMNTDERKLFLNNIS----- 670

Query: 223  FASGESSPQQARGNIQLENGTQASSTSYFLPLSKLNYNCNIFNINPMLTKNCWCDMMEKL 402
              SG  S  + R ++ LEN    SS    +  +K+NY  ++ ++NP++     CD + K 
Sbjct: 671  -TSGSCSKHERRHDV-LEN--CLSSKLDLMKDTKVNYPNDVLSMNPLVR----CDFLRKH 722

Query: 403  GGDHKQS---FVSYFDFSSVEDP 462
            G  +K++    + +FDFS+V+DP
Sbjct: 723  GNTNKRNQGKSLPWFDFSAVDDP 745


>emb|CAC05635.1| putative protein [Arabidopsis thaliana]
          Length = 1120

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 10/143 (6%)
 Frame = +1

Query: 64   VNCWPLGGLLKNPFC---DGVVPKGESQSHVTGSSLEVLGRI----EEVFMNKVSYFAEL 222
            +  WPLGGL +NPFC          E   + +G+ +E    +     ++F+N +S     
Sbjct: 616  IKSWPLGGLPRNPFCVDKKSADDDSEDPRNYSGARMEQRHLMNTDERKLFLNNIS----- 670

Query: 223  FASGESSPQQARGNIQLENGTQASSTSYFLPLSKLNYNCNIFNINPMLTKNCWCDMMEKL 402
              SG  S  + R ++ LEN    SS    +  +K+NY  ++ ++NP++     CD + K 
Sbjct: 671  -TSGSCSKHERRHDV-LEN--CLSSKLDLMKDTKVNYPNDVLSMNPLVR----CDFLRKH 722

Query: 403  GGDHKQS---FVSYFDFSSVEDP 462
            G  +K++    + +FDFS+V+DP
Sbjct: 723  GNTNKRNQGKSLPWFDFSAVDDP 745