BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030879
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vi...    71   1e-10
ref|XP_004146726.1| PREDICTED: F-box protein At5g07610-like [Cuc...    65   6e-09
ref|XP_004171566.1| PREDICTED: F-box protein At5g07610-like [Cuc...    64   1e-08
ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
gb|ABK92768.1| unknown [Populus trichocarpa]                           62   5e-08

>ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vinifera]
           gi|296088512|emb|CBI37503.3| unnamed protein product
           [Vitis vinifera]
          Length = 378

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/68 (52%), Positives = 45/68 (66%)
 Frame = -1

Query: 307 MNTDPKPWLDLLAFKDGILFMTVCAKVYSYNLDTRKINELCRLDCLGPNSFGIGSPIVFP 128
           ++ D  PW+D LAFKDG+L M V  K+  Y + TRK+ ELC L  LG NS  I  P+V P
Sbjct: 310 ISIDSIPWMDPLAFKDGLLLMRVSTKIILYCIGTRKMEELCNLSKLGRNS--IFGPLVIP 367

Query: 127 YSLSLVPL 104
           YSL+L PL
Sbjct: 368 YSLNLAPL 375


>ref|XP_004146726.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 398

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/64 (50%), Positives = 45/64 (70%)
 Frame = -1

Query: 292 KPWLDLLAFKDGILFMTVCAKVYSYNLDTRKINELCRLDCLGPNSFGIGSPIVFPYSLSL 113
           +P++D  AFKD +L M V + VY Y+++T K+ E+C +  LGPN F   SP V PYSLSL
Sbjct: 321 EPYMDPWAFKDEVLLMRVFSTVYFYHIETGKVVEVCNVASLGPNPF--VSPPVIPYSLSL 378

Query: 112 VPLE 101
           +PL+
Sbjct: 379 IPLD 382


>ref|XP_004171566.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 399

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/64 (50%), Positives = 44/64 (68%)
 Frame = -1

Query: 292 KPWLDLLAFKDGILFMTVCAKVYSYNLDTRKINELCRLDCLGPNSFGIGSPIVFPYSLSL 113
           +P++D  AFKD +L M V + VY Y+ +T K+ E+C +  LGPN F   SP V PYSLSL
Sbjct: 321 EPYMDPWAFKDEVLLMRVFSTVYFYHTETGKVVEVCNVASLGPNPF--VSPPVIPYSLSL 378

Query: 112 VPLE 101
           +PL+
Sbjct: 379 IPLD 382


>ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|222870635|gb|EEF07766.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/65 (46%), Positives = 43/65 (66%)
 Frame = -1

Query: 298 DPKPWLDLLAFKDGILFMTVCAKVYSYNLDTRKINELCRLDCLGPNSFGIGSPIVFPYSL 119
           D +PW+D LAFKDG+L + +   +Y Y++DT K+ E+      G  S+   SPIV PY++
Sbjct: 315 DDRPWMDPLAFKDGVLVVRISNTIYLYHVDTSKMEEVGETSKFGAMSW--VSPIVLPYTM 372

Query: 118 SLVPL 104
           SLVPL
Sbjct: 373 SLVPL 377


>gb|ABK92768.1| unknown [Populus trichocarpa]
          Length = 384

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/65 (46%), Positives = 43/65 (66%)
 Frame = -1

Query: 298 DPKPWLDLLAFKDGILFMTVCAKVYSYNLDTRKINELCRLDCLGPNSFGIGSPIVFPYSL 119
           D +PW+D LAFKDG+L + +   +Y Y++DT K+ E+      G  S+   SPIV PY++
Sbjct: 315 DDRPWMDPLAFKDGVLVVRISNTIYLYHVDTSKMEEVGETSKFGAMSW--VSPIVLPYTM 372

Query: 118 SLVPL 104
           SLVPL
Sbjct: 373 SLVPL 377