BLASTX nr result
ID: Coptis23_contig00030877
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00030877 (848 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containi... 297 2e-78 emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera] 297 2e-78 ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containi... 255 1e-65 ref|XP_002311155.1| predicted protein [Populus trichocarpa] gi|2... 244 1e-62 ref|XP_002881665.1| pentatricopeptide repeat-containing protein ... 243 3e-62 >ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like [Vitis vinifera] Length = 1005 Score = 297 bits (760), Expect = 2e-78 Identities = 146/263 (55%), Positives = 187/263 (71%) Frame = -1 Query: 830 TQLVNSYSQFKKPDSARLVFDTSINPSVILWNTTIKTYNRNFQSKEAIKMYYKMLENKVV 651 T L+N YS F K D AR VFD++ NPS ILWN+ I+ Y R+ Q EA++MYY M+E + Sbjct: 67 THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLE 126 Query: 650 PDKYTFTFVLKACTGNLDLEEGVKIHNEIALKGLECDVYVGTGLIDIYCIMGHVDKARKV 471 PDKYTFTFVLKACTG L+L+EGV H EI +GLE DV++G GL+D+Y MG + +AR+V Sbjct: 127 PDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREV 186 Query: 470 FDQIPVLDVVSWNVMIAGFSQSRDSYEALRFFRNMQFAGLVPNRVSLLNLLPSISEVSGV 291 FD++P DVV+WN MIAG SQS D EA+ FFR+MQ G+ P+ VSLLNL P I ++S + Sbjct: 187 FDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNI 246 Query: 290 VLCKSVHXXXXXXXXXXXXFNGLIDTYSKCGQVDAARLVFDHMMGRDDVSWGTMMAGYVH 111 LC+S+H NGLID YSKCG VD AR VFD M+ +DDVSWGTMMAGY H Sbjct: 247 ELCRSIHGYVFRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAH 306 Query: 110 NARFGETLKLFGCLRNANLKLNQ 42 N F E L+LF ++ N+++N+ Sbjct: 307 NGCFVEVLELFDKMKLGNVRINK 329 Score = 131 bits (329), Expect = 2e-28 Identities = 78/267 (29%), Positives = 134/267 (50%), Gaps = 3/267 (1%) Frame = -1 Query: 836 TNTQLVNSYSQFKKPDSARLVFDTSINPSVILWNTTIKTYNRNFQSKEAIKMYYKMLENK 657 T T LV+ Y++ +A F+ + ++ WN+ I Y + AI M+YK+ + Sbjct: 467 TGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSA 526 Query: 656 VVPDKYTFTFVLKACTGNLDLEEGVKIHNEIALKGLECDVYVGTGLIDIYCIMGHVDKAR 477 + PD T V+ AC DL++G IH I G E D +V LID+Y G + A Sbjct: 527 INPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAE 586 Query: 476 KVFDQIP-VLDVVSWNVMIAGFSQSRDSYEALRFFRNMQFAGLVPNRVSLLNLLPSISEV 300 +F++ D V+WNV+IA + Q+ + EA+ F M+ PN V+ +++LP+ + + Sbjct: 587 FLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYL 646 Query: 299 SGVVLCKSVH--XXXXXXXXXXXXFNGLIDTYSKCGQVDAARLVFDHMMGRDDVSWGTMM 126 + + H N LID Y+KCGQ+D + +F+ M +D VSW M+ Sbjct: 647 AAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAML 706 Query: 125 AGYVHNARFGETLKLFGCLRNANLKLN 45 +GY + + LF ++ + ++++ Sbjct: 707 SGYAVHGHGDRAIALFSLMQESQVQID 733 Score = 126 bits (316), Expect = 7e-27 Identities = 74/238 (31%), Positives = 125/238 (52%), Gaps = 2/238 (0%) Frame = -1 Query: 824 LVNSYSQFKKPDSARLVFDTSINPSVILWNTTIKTYNRNFQSKEAIKMYYKMLENKVVPD 645 L++ YS+ D AR VFD ++ + W T + Y N E ++++ KM V + Sbjct: 269 LIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRIN 328 Query: 644 KYTFTFVLKACTGNLDLEEGVKIHNEIALKGLECDVYVGTGLIDIYCIMGHVDKARKVFD 465 K + A +DLE+G +IH + ++ D+ V T L+ +Y G +KA+++F Sbjct: 329 KVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFW 388 Query: 464 QIPVLDVVSWNVMIAGFSQSRDSYEALRFFRNMQFAGLVPNRVSLLNLLPSISEVSGVVL 285 + D+V+W+ +IA Q+ EAL F+ MQ + PNRV+L+++LP+ +++S + L Sbjct: 389 GLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKL 448 Query: 284 CKSVHXXXXXXXXXXXXFNG--LIDTYSKCGQVDAARLVFDHMMGRDDVSWGTMMAGY 117 KS+H G L+ Y+KCG AA F+ M RD V+W +++ GY Sbjct: 449 GKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGY 506 Score = 108 bits (269), Expect = 2e-21 Identities = 63/265 (23%), Positives = 127/265 (47%), Gaps = 3/265 (1%) Frame = -1 Query: 830 TQLVNSYSQFKKPDSARLVFDTSINPSVILWNTTIKTYNRNFQSKEAIKMYYKMLENKVV 651 T L+ Y++ + + A+ +F ++ W+ I + +EA+ ++ +M K+ Sbjct: 368 TPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMK 427 Query: 650 PDKYTFTFVLKACTGNLDLEEGVKIHNEIALKGLECDVYVGTGLIDIYCIMGHVDKARKV 471 P++ T +L AC L+ G IH ++ D+ GT L+ +Y G A Sbjct: 428 PNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTT 487 Query: 470 FDQIPVLDVVSWNVMIAGFSQSRDSYEALRFFRNMQFAGLVPNRVSLLNLLPSISEVSGV 291 F+++ D+V+WN +I G++Q D Y A+ F ++ + + P+ +++ ++P+ + ++ + Sbjct: 488 FNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDL 547 Query: 290 VLCKSVH--XXXXXXXXXXXXFNGLIDTYSKCGQVDAARLVFDHM-MGRDDVSWGTMMAG 120 +H N LID Y+KCG + +A +F+ +D+V+W ++A Sbjct: 548 DQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAA 607 Query: 119 YVHNARFGETLKLFGCLRNANLKLN 45 Y+ N E + F +R N N Sbjct: 608 YMQNGHAKEAISSFHQMRLENFHPN 632 Score = 103 bits (256), Expect = 6e-20 Identities = 74/263 (28%), Positives = 118/263 (44%), Gaps = 2/263 (0%) Frame = -1 Query: 824 LVNSYSQFKKPDSARLVFDTSINPSVILWNTTIKTYNRNFQSKEAIKMYYKMLENKVVPD 645 LV+ YS+ AR VFD V+ WN I +++ EA+ + M V P Sbjct: 170 LVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPS 229 Query: 644 KYTFTFVLKACTGNLDLEEGVKIHNEIALKGLECDVYVGTGLIDIYCIMGHVDKARKVFD 465 + + ++E IH + + V GLID+Y G VD AR+VFD Sbjct: 230 SVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAV--SNGLIDLYSKCGDVDVARRVFD 287 Query: 464 QIPVLDVVSWNVMIAGFSQSRDSYEALRFFRNMQFAGLVPNRVSLLNLLPSISEVSGVVL 285 Q+ D VSW M+AG++ + E L F M+ + N+VS ++ + +E + Sbjct: 288 QMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEK 347 Query: 284 CKSVH--XXXXXXXXXXXXFNGLIDTYSKCGQVDAARLVFDHMMGRDDVSWGTMMAGYVH 111 K +H L+ Y+KCG+ + A+ +F + GRD V+W ++A V Sbjct: 348 GKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQ 407 Query: 110 NARFGETLKLFGCLRNANLKLNQ 42 E L LF ++N +K N+ Sbjct: 408 TGYPEEALSLFQEMQNQKMKPNR 430 Score = 85.9 bits (211), Expect = 1e-14 Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 1/170 (0%) Frame = -1 Query: 824 LVNSYSQFKKPDSARLVFD-TSINPSVILWNTTIKTYNRNFQSKEAIKMYYKMLENKVVP 648 L++ Y++ SA +F+ T + WN I Y +N +KEAI +++M P Sbjct: 572 LIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHP 631 Query: 647 DKYTFTFVLKACTGNLDLEEGVKIHNEIALKGLECDVYVGTGLIDIYCIMGHVDKARKVF 468 + TF VL A EG+ H I G + VG LID+Y G +D + K+F Sbjct: 632 NSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLF 691 Query: 467 DQIPVLDVVSWNVMIAGFSQSRDSYEALRFFRNMQFAGLVPNRVSLLNLL 318 +++ D VSWN M++G++ A+ F MQ + + + VS +++L Sbjct: 692 NEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVL 741 >emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera] Length = 1005 Score = 297 bits (760), Expect = 2e-78 Identities = 146/263 (55%), Positives = 187/263 (71%) Frame = -1 Query: 830 TQLVNSYSQFKKPDSARLVFDTSINPSVILWNTTIKTYNRNFQSKEAIKMYYKMLENKVV 651 T L+N YS F K D AR VFD++ NPS ILWN+ I+ Y R+ Q EA++MYY M+E + Sbjct: 67 THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLE 126 Query: 650 PDKYTFTFVLKACTGNLDLEEGVKIHNEIALKGLECDVYVGTGLIDIYCIMGHVDKARKV 471 PDKYTFTFVLKACTG L+L+EGV H EI +GLE DV++G GL+D+Y MG + +AR+V Sbjct: 127 PDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREV 186 Query: 470 FDQIPVLDVVSWNVMIAGFSQSRDSYEALRFFRNMQFAGLVPNRVSLLNLLPSISEVSGV 291 FD++P DVV+WN MIAG SQS D EA+ FFR+MQ G+ P+ VSLLNL P I ++S + Sbjct: 187 FDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNI 246 Query: 290 VLCKSVHXXXXXXXXXXXXFNGLIDTYSKCGQVDAARLVFDHMMGRDDVSWGTMMAGYVH 111 LC+S+H NGLID YSKCG VD AR VFD M+ +DDVSWGTMMAGY H Sbjct: 247 ELCRSIHGYVFRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAH 306 Query: 110 NARFGETLKLFGCLRNANLKLNQ 42 N F E L+LF ++ N+++N+ Sbjct: 307 NGCFVEVLELFDKMKLGNVRINK 329 Score = 128 bits (322), Expect = 1e-27 Identities = 77/267 (28%), Positives = 133/267 (49%), Gaps = 3/267 (1%) Frame = -1 Query: 836 TNTQLVNSYSQFKKPDSARLVFDTSINPSVILWNTTIKTYNRNFQSKEAIKMYYKMLENK 657 T T LV+ Y++ +A F+ + ++ WN+ I Y + AI M+YK+ + Sbjct: 467 TGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSA 526 Query: 656 VVPDKYTFTFVLKACTGNLDLEEGVKIHNEIALKGLECDVYVGTGLIDIYCIMGHVDKAR 477 + PD T V+ AC DL++G IH I G E D +V LID+Y G + A Sbjct: 527 INPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAE 586 Query: 476 KVFDQIP-VLDVVSWNVMIAGFSQSRDSYEALRFFRNMQFAGLVPNRVSLLNLLPSISEV 300 +F++ D V+WNV+IA + Q+ + EA+ F M+ PN V+ +++LP+ + + Sbjct: 587 FLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYL 646 Query: 299 SGVVLCKSVH--XXXXXXXXXXXXFNGLIDTYSKCGQVDAARLVFDHMMGRDDVSWGTMM 126 + + H N LID Y+KCGQ+ + +F+ M +D VSW M+ Sbjct: 647 AAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAML 706 Query: 125 AGYVHNARFGETLKLFGCLRNANLKLN 45 +GY + + LF ++ + ++++ Sbjct: 707 SGYAVHGHGDRAIALFSLMQESQVQID 733 Score = 126 bits (316), Expect = 7e-27 Identities = 74/238 (31%), Positives = 125/238 (52%), Gaps = 2/238 (0%) Frame = -1 Query: 824 LVNSYSQFKKPDSARLVFDTSINPSVILWNTTIKTYNRNFQSKEAIKMYYKMLENKVVPD 645 L++ YS+ D AR VFD ++ + W T + Y N E ++++ KM V + Sbjct: 269 LIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRIN 328 Query: 644 KYTFTFVLKACTGNLDLEEGVKIHNEIALKGLECDVYVGTGLIDIYCIMGHVDKARKVFD 465 K + A +DLE+G +IH + ++ D+ V T L+ +Y G +KA+++F Sbjct: 329 KVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFW 388 Query: 464 QIPVLDVVSWNVMIAGFSQSRDSYEALRFFRNMQFAGLVPNRVSLLNLLPSISEVSGVVL 285 + D+V+W+ +IA Q+ EAL F+ MQ + PNRV+L+++LP+ +++S + L Sbjct: 389 GLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKL 448 Query: 284 CKSVHXXXXXXXXXXXXFNG--LIDTYSKCGQVDAARLVFDHMMGRDDVSWGTMMAGY 117 KS+H G L+ Y+KCG AA F+ M RD V+W +++ GY Sbjct: 449 GKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGY 506 Score = 108 bits (269), Expect = 2e-21 Identities = 63/265 (23%), Positives = 127/265 (47%), Gaps = 3/265 (1%) Frame = -1 Query: 830 TQLVNSYSQFKKPDSARLVFDTSINPSVILWNTTIKTYNRNFQSKEAIKMYYKMLENKVV 651 T L+ Y++ + + A+ +F ++ W+ I + +EA+ ++ +M K+ Sbjct: 368 TPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMK 427 Query: 650 PDKYTFTFVLKACTGNLDLEEGVKIHNEIALKGLECDVYVGTGLIDIYCIMGHVDKARKV 471 P++ T +L AC L+ G IH ++ D+ GT L+ +Y G A Sbjct: 428 PNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTT 487 Query: 470 FDQIPVLDVVSWNVMIAGFSQSRDSYEALRFFRNMQFAGLVPNRVSLLNLLPSISEVSGV 291 F+++ D+V+WN +I G++Q D Y A+ F ++ + + P+ +++ ++P+ + ++ + Sbjct: 488 FNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDL 547 Query: 290 VLCKSVH--XXXXXXXXXXXXFNGLIDTYSKCGQVDAARLVFDHM-MGRDDVSWGTMMAG 120 +H N LID Y+KCG + +A +F+ +D+V+W ++A Sbjct: 548 DQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAA 607 Query: 119 YVHNARFGETLKLFGCLRNANLKLN 45 Y+ N E + F +R N N Sbjct: 608 YMQNGHAKEAISSFHQMRLENFHPN 632 Score = 103 bits (256), Expect = 6e-20 Identities = 74/263 (28%), Positives = 118/263 (44%), Gaps = 2/263 (0%) Frame = -1 Query: 824 LVNSYSQFKKPDSARLVFDTSINPSVILWNTTIKTYNRNFQSKEAIKMYYKMLENKVVPD 645 LV+ YS+ AR VFD V+ WN I +++ EA+ + M V P Sbjct: 170 LVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPS 229 Query: 644 KYTFTFVLKACTGNLDLEEGVKIHNEIALKGLECDVYVGTGLIDIYCIMGHVDKARKVFD 465 + + ++E IH + + V GLID+Y G VD AR+VFD Sbjct: 230 SVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAV--SNGLIDLYSKCGDVDVARRVFD 287 Query: 464 QIPVLDVVSWNVMIAGFSQSRDSYEALRFFRNMQFAGLVPNRVSLLNLLPSISEVSGVVL 285 Q+ D VSW M+AG++ + E L F M+ + N+VS ++ + +E + Sbjct: 288 QMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEK 347 Query: 284 CKSVH--XXXXXXXXXXXXFNGLIDTYSKCGQVDAARLVFDHMMGRDDVSWGTMMAGYVH 111 K +H L+ Y+KCG+ + A+ +F + GRD V+W ++A V Sbjct: 348 GKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQ 407 Query: 110 NARFGETLKLFGCLRNANLKLNQ 42 E L LF ++N +K N+ Sbjct: 408 TGYPEEALSLFQEMQNQKMKPNR 430 Score = 83.2 bits (204), Expect = 7e-14 Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 1/170 (0%) Frame = -1 Query: 824 LVNSYSQFKKPDSARLVFD-TSINPSVILWNTTIKTYNRNFQSKEAIKMYYKMLENKVVP 648 L++ Y++ SA +F+ T + WN I Y +N +KEAI +++M P Sbjct: 572 LIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHP 631 Query: 647 DKYTFTFVLKACTGNLDLEEGVKIHNEIALKGLECDVYVGTGLIDIYCIMGHVDKARKVF 468 + TF VL A EG+ H I G + VG LID+Y G + + K+F Sbjct: 632 NSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLF 691 Query: 467 DQIPVLDVVSWNVMIAGFSQSRDSYEALRFFRNMQFAGLVPNRVSLLNLL 318 +++ D VSWN M++G++ A+ F MQ + + + VS +++L Sbjct: 692 NEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVL 741 >ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like [Glycine max] Length = 887 Score = 255 bits (651), Expect = 1e-65 Identities = 125/240 (52%), Positives = 163/240 (67%), Gaps = 1/240 (0%) Frame = -1 Query: 758 NPSVILWNTTIKTYNRNFQSKEAIKMYYKMLENKVVPDKYTFTFVLKACTGNLDLEEGVK 579 NPS+ILWN+ I+ Y+R +EAIK Y M + PDKYTFTFVLKACTG LD EGV Sbjct: 89 NPSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFHEGVA 148 Query: 578 IHNEIALKGLECDVYVGTGLIDIYCIMGHVDKARKVFDQIPVLDVVSWNVMIAGFSQSRD 399 IH +IA + LECDV++GTGL+D+YC MGH+D ARKVFD++P DV SWN MI+G SQS + Sbjct: 149 IHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSN 208 Query: 398 SYEALRFFRNMQF-AGLVPNRVSLLNLLPSISEVSGVVLCKSVHXXXXXXXXXXXXFNGL 222 EAL F+ MQ G+ P+ VS+LNL P++S + V CKS+H N L Sbjct: 209 PCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVRRCVFGVVSNSL 268 Query: 221 IDTYSKCGQVDAARLVFDHMMGRDDVSWGTMMAGYVHNARFGETLKLFGCLRNANLKLNQ 42 ID YSKCG+V A +FD M +DD+SW TMMAGYVH+ + E L+L ++ ++K+N+ Sbjct: 269 IDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHIKMNK 328 Score = 122 bits (306), Expect = 1e-25 Identities = 77/265 (29%), Positives = 130/265 (49%), Gaps = 3/265 (1%) Frame = -1 Query: 830 TQLVNSYSQFKKPDSARLVFDTSINPSVILWNTTIKTYNRNFQSKEAIKMYYKMLENKVV 651 T LV+ Y++ K A +F+ V+ WNT I + + + A++M+ ++ + V Sbjct: 468 TTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQ 527 Query: 650 PDKYTFTFVLKACTGNLDLEEGVKIHNEIALKGLECDVYVGTGLIDIYCIMGHVDKARKV 471 PD T +L AC DL G+ H I G+E +++V LID+Y G + A + Sbjct: 528 PDSGTMVSLLSACALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMYAKCGSLCTAENL 587 Query: 470 FD-QIPVLDVVSWNVMIAGFSQSRDSYEALRFFRNMQFAGLVPNRVSLLNLLPSISEVSG 294 F V D VSWNVMIAG+ + + EA+ F M+ + PN V+ + +LP++S +S Sbjct: 588 FHLNKHVKDEVSWNVMIAGYLHNGCANEAISTFNQMKLESVRPNLVTFVTILPAVSYLSI 647 Query: 293 VVLCKSVH--XXXXXXXXXXXXFNGLIDTYSKCGQVDAARLVFDHMMGRDDVSWGTMMAG 120 + + H N LID Y+K GQ+ + F M + +SW M++G Sbjct: 648 LREAMAFHACIIRMGFISSTLIGNSLIDMYAKSGQLSYSEKCFHEMENKGTISWNAMLSG 707 Query: 119 YVHNARFGETLKLFGCLRNANLKLN 45 Y + + L LF ++ ++ ++ Sbjct: 708 YAMHGQGEVALALFSLMQETHVPVD 732 Score = 101 bits (251), Expect = 2e-19 Identities = 71/263 (26%), Positives = 123/263 (46%), Gaps = 3/263 (1%) Frame = -1 Query: 830 TQLVNSYSQFKKPDSARLVFDTSINPSVILWNTTIKTYNRNFQSKEAIKMYYKM-LENKV 654 T LV+ Y + D+AR VFD V WN I +++ EA++++ +M +E V Sbjct: 166 TGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSNPCEALEIFQRMQMEEGV 225 Query: 653 VPDKYTFTFVLKACTGNLDLEEGVKIHNEIALKGLECDVYVGTGLIDIYCIMGHVDKARK 474 PD + + A + D++ IH + + + V LID+Y G V A + Sbjct: 226 EPDSVSILNLAPAVSRLEDVDSCKSIHGYVVRRCV--FGVVSNSLIDMYSKCGEVKLAHQ 283 Query: 473 VFDQIPVLDVVSWNVMIAGFSQSRDSYEALRFFRNMQFAGLVPNRVSLLNLLPSISEVSG 294 +FDQ+ V D +SW M+AG+ +E L+ M+ + N++S++N + + +E Sbjct: 284 IFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHIKMNKISVVNSVLAATETRD 343 Query: 293 VVLCKSVH--XXXXXXXXXXXXFNGLIDTYSKCGQVDAARLVFDHMMGRDDVSWGTMMAG 120 + K VH ++ Y+KCG++ A+ F + GRD V W ++ Sbjct: 344 LEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFLSA 403 Query: 119 YVHNARFGETLKLFGCLRNANLK 51 V GE L +F +++ LK Sbjct: 404 LVQAGYPGEALSIFQEMQHEGLK 426 Score = 98.6 bits (244), Expect = 2e-18 Identities = 64/265 (24%), Positives = 126/265 (47%), Gaps = 3/265 (1%) Frame = -1 Query: 830 TQLVNSYSQFKKPDSARLVFDTSINPSVILWNTTIKTYNRNFQSKEAIKMYYKMLENKVV 651 T +V+ Y++ + A+ F + +++W+ + + EA+ ++ +M + Sbjct: 367 TPIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLK 426 Query: 650 PDKYTFTFVLKACTGNLDLEEGVKIHNEIALKGLECDVYVGTGLIDIYCIMGHVDKARKV 471 PDK + ++ AC G +H + + D+ V T L+ +Y A + Sbjct: 427 PDKTILSSLVSACAEISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTL 486 Query: 470 FDQIPVLDVVSWNVMIAGFSQSRDSYEALRFFRNMQFAGLVPNRVSLLNLLPSISEVSGV 291 F+++ DVV+WN +I GF++ D AL F +Q +G+ P+ ++++LL + + + + Sbjct: 487 FNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDL 546 Query: 290 VL--CKSVHXXXXXXXXXXXXFNGLIDTYSKCGQVDAARLVFD-HMMGRDDVSWGTMMAG 120 L C + LID Y+KCG + A +F + +D+VSW M+AG Sbjct: 547 YLGICFHGNIIKNGIESEMHVKVALIDMYAKCGSLCTAENLFHLNKHVKDEVSWNVMIAG 606 Query: 119 YVHNARFGETLKLFGCLRNANLKLN 45 Y+HN E + F ++ +++ N Sbjct: 607 YLHNGCANEAISTFNQMKLESVRPN 631 Score = 96.3 bits (238), Expect = 8e-18 Identities = 61/243 (25%), Positives = 114/243 (46%), Gaps = 2/243 (0%) Frame = -1 Query: 839 MTNTQLVNSYSQFKKPDSARLVFDTSINPSVILWNTTIKTYNRNFQSKEAIKMYYKMLEN 660 + + L++ YS+ + A +FD I W T + Y + E +++ +M Sbjct: 263 VVSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRK 322 Query: 659 KVVPDKYTFTFVLKACTGNLDLEEGVKIHNEIALKGLECDVYVGTGLIDIYCIMGHVDKA 480 + +K + + A T DLE+G ++HN G+ D+ V T ++ +Y G + KA Sbjct: 323 HIKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKA 382 Query: 479 RKVFDQIPVLDVVSWNVMIAGFSQSRDSYEALRFFRNMQFAGLVPNRVSLLNLLPSISEV 300 ++ F + D+V W+ ++ Q+ EAL F+ MQ GL P++ L +L+ + +E+ Sbjct: 383 KEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEI 442 Query: 299 SGVVLCKSVH--XXXXXXXXXXXXFNGLIDTYSKCGQVDAARLVFDHMMGRDDVSWGTMM 126 S L K +H L+ Y++C A +F+ M +D V+W T++ Sbjct: 443 SSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLI 502 Query: 125 AGY 117 G+ Sbjct: 503 NGF 505 Score = 67.0 bits (162), Expect = 5e-09 Identities = 41/143 (28%), Positives = 65/143 (45%) Frame = -1 Query: 746 ILWNTTIKTYNRNFQSKEAIKMYYKMLENKVVPDKYTFTFVLKACTGNLDLEEGVKIHNE 567 + WN I Y N + EAI + +M V P+ TF +L A + L E + H Sbjct: 598 VSWNVMIAGYLHNGCANEAISTFNQMKLESVRPNLVTFVTILPAVSYLSILREAMAFHAC 657 Query: 566 IALKGLECDVYVGTGLIDIYCIMGHVDKARKVFDQIPVLDVVSWNVMIAGFSQSRDSYEA 387 I G +G LID+Y G + + K F ++ +SWN M++G++ A Sbjct: 658 IIRMGFISSTLIGNSLIDMYAKSGQLSYSEKCFHEMENKGTISWNAMLSGYAMHGQGEVA 717 Query: 386 LRFFRNMQFAGLVPNRVSLLNLL 318 L F MQ + + VS +++L Sbjct: 718 LALFSLMQETHVPVDSVSYISVL 740 >ref|XP_002311155.1| predicted protein [Populus trichocarpa] gi|222850975|gb|EEE88522.1| predicted protein [Populus trichocarpa] Length = 305 Score = 244 bits (624), Expect = 1e-62 Identities = 119/244 (48%), Positives = 164/244 (67%), Gaps = 1/244 (0%) Frame = -1 Query: 848 QND-MTNTQLVNSYSQFKKPDSARLVFDTSINPSVILWNTTIKTYNRNFQSKEAIKMYYK 672 QND +TN L+ SY F K + AR +FD+ NPSV+L+N+ I+ Y+R +EAI +Y+ Sbjct: 62 QNDHLTNAHLIKSYLLFLKCNYARFLFDSLPNPSVMLYNSIIRAYSRTKNHQEAINIYHC 121 Query: 671 MLENKVVPDKYTFTFVLKACTGNLDLEEGVKIHNEIALKGLECDVYVGTGLIDIYCIMGH 492 ML + PDKYTFTFVLKACTG L +EG+ +H +I ++GLE D ++GT L+D+YC MG Sbjct: 122 MLNKGLEPDKYTFTFVLKACTGALYFKEGILVHKDIIVRGLERDAFIGTSLVDMYCKMGD 181 Query: 491 VDKARKVFDQIPVLDVVSWNVMIAGFSQSRDSYEALRFFRNMQFAGLVPNRVSLLNLLPS 312 + ARKVFD++P DVV+W+ MI G SQS D E F R+MQ +G+ N VS+LNL+P+ Sbjct: 182 LKLARKVFDKMPEKDVVAWSAMILGLSQSEDPNEVFGFIRSMQLSGVELNLVSILNLVPA 241 Query: 311 ISEVSGVVLCKSVHXXXXXXXXXXXXFNGLIDTYSKCGQVDAARLVFDHMMGRDDVSWGT 132 +S + + C+ +H NGLID YSK G +D R +F++M +DDVSWGT Sbjct: 242 VSRLGDIDACRCIHGYVIRRGFDAIVSNGLIDMYSKSGNIDVGRQIFEYMPDKDDVSWGT 301 Query: 131 MMAG 120 MMAG Sbjct: 302 MMAG 305 Score = 67.4 bits (163), Expect = 4e-09 Identities = 46/181 (25%), Positives = 87/181 (48%), Gaps = 4/181 (2%) Frame = -1 Query: 584 VKIHNEIALKGLECDVYVGTGLIDIYCIMGHVDKARKVFDQIPVLDVVSWNVMIAGFSQS 405 ++IH + + GL+ D LI Y + + AR +FD +P V+ +N +I +S++ Sbjct: 50 LQIHVRLTVSGLQNDHLTNAHLIKSYLLFLKCNYARFLFDSLPNPSVMLYNSIIRAYSRT 109 Query: 404 RDSYEALRFFRNMQFAGLVPNRVSLLNLLPSISEV----SGVVLCKSVHXXXXXXXXXXX 237 ++ EA+ + M GL P++ + +L + + G+++ K + Sbjct: 110 KNHQEAINIYHCMLNKGLEPDKYTFTFVLKACTGALYFKEGILVHKDI--IVRGLERDAF 167 Query: 236 XFNGLIDTYSKCGQVDAARLVFDHMMGRDDVSWGTMMAGYVHNARFGETLKLFGCLRNAN 57 L+D Y K G + AR VFD M +D V+W M+ G ++ + ++FG +R+ Sbjct: 168 IGTSLVDMYCKMGDLKLARKVFDKMPEKDVVAWSAMILGL---SQSEDPNEVFGFIRSMQ 224 Query: 56 L 54 L Sbjct: 225 L 225 >ref|XP_002881665.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297327504|gb|EFH57924.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 836 Score = 243 bits (621), Expect = 3e-62 Identities = 117/265 (44%), Positives = 177/265 (66%), Gaps = 1/265 (0%) Frame = -1 Query: 833 NTQLVNSYSQFKKPDSARLVFDTSINPSVILWNTTIKTYNRNFQSKEAIKMYYKMLENKV 654 + QL+N+YS F++PD +R + D+ P V+LWN+ I+ Y R KEA++++ M E K Sbjct: 36 HNQLINAYSLFQRPDLSRKIVDSVPYPGVVLWNSMIRGYTRAGLHKEALEVFGYMSEAKG 95 Query: 653 V-PDKYTFTFVLKACTGNLDLEEGVKIHNEIALKGLECDVYVGTGLIDIYCIMGHVDKAR 477 + PDKYTFTF LKAC G++D EEG++IH+ IA G E DVY+GT L+++YC G + AR Sbjct: 96 IDPDKYTFTFALKACAGSMDFEEGLRIHDLIAEMGFESDVYIGTALVEMYCKAGDLVSAR 155 Query: 476 KVFDQIPVLDVVSWNVMIAGFSQSRDSYEALRFFRNMQFAGLVPNRVSLLNLLPSISEVS 297 +VFD++PV D+V+WN M++G +Q+ S EALR FR+M + + + VSL NL+P++S++ Sbjct: 156 QVFDKMPVKDIVTWNTMVSGLAQNGCSSEALRLFRDMHSSFVDIDHVSLYNLIPAVSKLE 215 Query: 296 GVVLCKSVHXXXXXXXXXXXXFNGLIDTYSKCGQVDAARLVFDHMMGRDDVSWGTMMAGY 117 +C+ +H +GLID Y KC + AA VF+ + +D+ SWGTMMA Y Sbjct: 216 KNDVCRCLHGLVIKKGFTSAFSSGLIDMYCKCADLYAAECVFEEVFSKDESSWGTMMAAY 275 Query: 116 VHNARFGETLKLFGCLRNANLKLNQ 42 HN F E L+LF +RN ++++N+ Sbjct: 276 AHNGSFEEVLELFDVMRNYDVRMNK 300 Score = 107 bits (267), Expect = 3e-21 Identities = 71/259 (27%), Positives = 119/259 (45%), Gaps = 2/259 (0%) Frame = -1 Query: 824 LVNSYSQFKKPDSARLVFDTSINPSVILWNTTIKTYNRNFQSKEAIKMYYKMLENKVVPD 645 L++ Y + +A VF+ + W T + Y N +E ++++ M V + Sbjct: 240 LIDMYCKCADLYAAECVFEEVFSKDESSWGTMMAAYAHNGSFEEVLELFDVMRNYDVRMN 299 Query: 644 KYTFTFVLKACTGNLDLEEGVKIHNEIALKGLECDVYVGTGLIDIYCIMGHVDKARKVFD 465 K L+A +LE+G+ IH +G+ D+ V T LI++Y G ++ A ++F Sbjct: 300 KVAAASALQAAAYVGNLEKGIAIHEYTVQQGMMSDISVATSLINMYSKCGELELAEQLFI 359 Query: 464 QIPVLDVVSWNVMIAGFSQSRDSYEALRFFRNMQFAGLVPNRVSLLNLLPSISEVSGVVL 285 +I DVVSW+ MIA F Q+ EAL FR+M PN V+L ++L + V+ L Sbjct: 360 KIKDRDVVSWSAMIASFEQAGQHDEALSLFRDMMRTHFKPNAVTLTSVLQGCAGVAASRL 419 Query: 284 CKSVH--XXXXXXXXXXXXFNGLIDTYSKCGQVDAARLVFDHMMGRDDVSWGTMMAGYVH 111 KS+H +I Y+KCG F+ + +D +++ + GY Sbjct: 420 GKSIHCYAIKADVESELETATAVISMYAKCGLFSPTLKAFERLPIKDAIAFNALAQGY-- 477 Query: 110 NARFGETLKLFGCLRNANL 54 + G+ K F +N L Sbjct: 478 -TQIGDASKAFDVYKNMKL 495 Score = 103 bits (258), Expect = 4e-20 Identities = 63/254 (24%), Positives = 119/254 (46%), Gaps = 3/254 (1%) Frame = -1 Query: 830 TQLVNSYSQFKKPDSARLVFDTSINPSVILWNTTIKTYNRNFQSKEAIKMYYKMLENKVV 651 T L+N YS+ + + A +F + V+ W+ I ++ + Q EA+ ++ M+ Sbjct: 339 TSLINMYSKCGELELAEQLFIKIKDRDVVSWSAMIASFEQAGQHDEALSLFRDMMRTHFK 398 Query: 650 PDKYTFTFVLKACTGNLDLEEGVKIHNEIALKGLECDVYVGTGLIDIYCIMGHVDKARKV 471 P+ T T VL+ C G G IH +E ++ T +I +Y G K Sbjct: 399 PNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADVESELETATAVISMYAKCGLFSPTLKA 458 Query: 470 FDQIPVLDVVSWNVMIAGFSQSRDSYEALRFFRNMQFAGLVPNRVSLLNLLPSISEVSGV 291 F+++P+ D +++N + G++Q D+ +A ++NM+ G+ P+ +++ +L + + S Sbjct: 459 FERLPIKDAIAFNALAQGYTQIGDASKAFDVYKNMKLHGVCPDSGTMVGMLQTCALCSDY 518 Query: 290 V--LCKSVHXXXXXXXXXXXXFNGLIDTYSKCGQVDAARLVFDHM-MGRDDVSWGTMMAG 120 C + LID ++KC + AA+ +FD + VSW MM G Sbjct: 519 ARGSCVYGQIIKHGFDSECHVAHALIDMFTKCDALAAAKSLFDKCGFEKSTVSWNIMMNG 578 Query: 119 YVHNARFGETLKLF 78 Y+ + + E + F Sbjct: 579 YLLHGQAEEAIATF 592 Score = 101 bits (252), Expect = 2e-19 Identities = 65/265 (24%), Positives = 123/265 (46%), Gaps = 3/265 (1%) Frame = -1 Query: 836 TNTQLVNSYSQFKKPDSARLVFDTSINPSVILWNTTIKTYNRNFQSKEAIKMYYKMLENK 657 T T +++ Y++ F+ I +N + Y + + +A +Y M + Sbjct: 438 TATAVISMYAKCGLFSPTLKAFERLPIKDAIAFNALAQGYTQIGDASKAFDVYKNMKLHG 497 Query: 656 VVPDKYTFTFVLKACTGNLDLEEGVKIHNEIALKGLECDVYVGTGLIDIYCIMGHVDKAR 477 V PD T +L+ C D G ++ +I G + + +V LID++ + A+ Sbjct: 498 VCPDSGTMVGMLQTCALCSDYARGSCVYGQIIKHGFDSECHVAHALIDMFTKCDALAAAK 557 Query: 476 KVFDQIPV-LDVVSWNVMIAGFSQSRDSYEALRFFRNMQFAGLVPNRVSLLNLLPSISEV 300 +FD+ VSWN+M+ G+ + EA+ FR M+ PN V+ +N++ + +E+ Sbjct: 558 SLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAIATFRQMKVEKFQPNAVTFVNIVRAAAEL 617 Query: 299 SGVVLCKSVHXXXXXXXXXXXXF--NGLIDTYSKCGQVDAARLVFDHMMGRDDVSWGTMM 126 + + L SVH N L+D Y+KCG +++++ F + ++ VSW TM+ Sbjct: 618 AALSLGMSVHSSLIQFGFCSHTPVGNSLVDMYAKCGMIESSKKCFIEIRNKNMVSWNTML 677 Query: 125 AGYVHNARFGETLKLFGCLRNANLK 51 + Y + + LF ++ LK Sbjct: 678 SAYAAHGLANCAVSLFLSMQENELK 702 Score = 91.3 bits (225), Expect = 2e-16 Identities = 70/265 (26%), Positives = 120/265 (45%), Gaps = 3/265 (1%) Frame = -1 Query: 830 TQLVNSYSQFKKPDSARLVFDTSINPSVILWNTTIKTYNRNFQSKEAIKMYYKMLENKVV 651 T LV Y + SAR VFD ++ WNT + +N S EA++++ M + V Sbjct: 139 TALVEMYCKAGDLVSARQVFDKMPVKDIVTWNTMVSGLAQNGCSSEALRLFRDMHSSFVD 198 Query: 650 PDKYTFTFVLKACTGNLDLEEGVK-IHNEIALKGLECDVYVGTGLIDIYCIMGHVDKARK 474 D + ++ A + L+ + + +H + KG +GLID+YC + A Sbjct: 199 IDHVSLYNLIPAVS-KLEKNDVCRCLHGLVIKKGFTSAF--SSGLIDMYCKCADLYAAEC 255 Query: 473 VFDQIPVLDVVSWNVMIAGFSQSRDSYEALRFFRNMQFAGLVPNRVSLLNLLPSISEVSG 294 VF+++ D SW M+A ++ + E L F M+ + N+V+ + L + + V Sbjct: 256 VFEEVFSKDESSWGTMMAAYAHNGSFEEVLELFDVMRNYDVRMNKVAAASALQAAAYVGN 315 Query: 293 VVLCKSVHXXXXXXXXXXXXF--NGLIDTYSKCGQVDAARLVFDHMMGRDDVSWGTMMAG 120 + ++H LI+ YSKCG+++ A +F + RD VSW M+A Sbjct: 316 LEKGIAIHEYTVQQGMMSDISVATSLINMYSKCGELELAEQLFIKIKDRDVVSWSAMIAS 375 Query: 119 YVHNARFGETLKLFGCLRNANLKLN 45 + + E L LF + + K N Sbjct: 376 FEQAGQHDEALSLFRDMMRTHFKPN 400 Score = 77.0 bits (188), Expect = 5e-12 Identities = 46/170 (27%), Positives = 88/170 (51%), Gaps = 1/170 (0%) Frame = -1 Query: 824 LVNSYSQFKKPDSARLVFDT-SINPSVILWNTTIKTYNRNFQSKEAIKMYYKMLENKVVP 648 L++ +++ +A+ +FD S + WN + Y + Q++EAI + +M K P Sbjct: 543 LIDMFTKCDALAAAKSLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAIATFRQMKVEKFQP 602 Query: 647 DKYTFTFVLKACTGNLDLEEGVKIHNEIALKGLECDVYVGTGLIDIYCIMGHVDKARKVF 468 + TF +++A L G+ +H+ + G VG L+D+Y G ++ ++K F Sbjct: 603 NAVTFVNIVRAAAELAALSLGMSVHSSLIQFGFCSHTPVGNSLVDMYAKCGMIESSKKCF 662 Query: 467 DQIPVLDVVSWNVMIAGFSQSRDSYEALRFFRNMQFAGLVPNRVSLLNLL 318 +I ++VSWN M++ ++ + A+ F +MQ L P+ VS L++L Sbjct: 663 IEIRNKNMVSWNTMLSAYAAHGLANCAVSLFLSMQENELKPDSVSFLSVL 712