BLASTX nr result

ID: Coptis23_contig00030872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030872
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511640.1| conserved hypothetical protein [Ricinus comm...   108   3e-22
ref|XP_002277033.1| PREDICTED: uncharacterized protein LOC100244...   100   2e-19
emb|CAN77635.1| hypothetical protein VITISV_002322 [Vitis vinifera]   100   2e-19
ref|XP_002326823.1| predicted protein [Populus trichocarpa] gi|1...    93   3e-17
ref|XP_002302513.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17

>ref|XP_002511640.1| conserved hypothetical protein [Ricinus communis]
           gi|223548820|gb|EEF50309.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 125

 Score =  108 bits (271), Expect = 3e-22
 Identities = 56/92 (60%), Positives = 66/92 (71%), Gaps = 4/92 (4%)
 Frame = -2

Query: 348 YCSNFYDESSSTAGFCDWCLSKERNGKHV-SSKKSI-GKEVGA--RSSEYSHEKIKHNDR 181
           YCSN+Y E S     CDWC S+ERN +H  SSKKS+ G ++G     SEYS +KIK +DR
Sbjct: 34  YCSNYYRELSEPIELCDWCQSEERNARHGNSSKKSVTGHDIGGVTNRSEYSGDKIKQHDR 93

Query: 180 EDINVEKGKNTSGAPSPRQASRRYKSLKDVMC 85
           ED   EKGK+ SGAPSPR A+RRYK LKDVMC
Sbjct: 94  EDSTAEKGKSPSGAPSPRTATRRYKLLKDVMC 125


>ref|XP_002277033.1| PREDICTED: uncharacterized protein LOC100244418 [Vitis vinifera]
           gi|297734566|emb|CBI16617.3| unnamed protein product
           [Vitis vinifera]
          Length = 126

 Score =  100 bits (248), Expect = 2e-19
 Identities = 55/92 (59%), Positives = 64/92 (69%), Gaps = 4/92 (4%)
 Frame = -2

Query: 348 YCSNFYDESSSTAGFCDWCLSKERNGKH--VSSKKSIGK-EVGARS-SEYSHEKIKHNDR 181
           YCSN+Y ESS     CDWC ++ER+      SSKKS+G  E G  S SEYS +KIK +DR
Sbjct: 36  YCSNYYSESSERMEVCDWCQTEERSATRHGSSSKKSVGGLEAGVTSRSEYSGDKIKQHDR 95

Query: 180 EDINVEKGKNTSGAPSPRQASRRYKSLKDVMC 85
           E+   EKGKN SGAPSPR  +RRYK LKDVMC
Sbjct: 96  EESG-EKGKNPSGAPSPRPTTRRYKLLKDVMC 126


>emb|CAN77635.1| hypothetical protein VITISV_002322 [Vitis vinifera]
          Length = 151

 Score =  100 bits (248), Expect = 2e-19
 Identities = 55/92 (59%), Positives = 64/92 (69%), Gaps = 4/92 (4%)
 Frame = -2

Query: 348 YCSNFYDESSSTAGFCDWCLSKERNGKH--VSSKKSIGK-EVGARS-SEYSHEKIKHNDR 181
           YCSN+Y ESS     CDWC ++ER+      SSKKS+G  E G  S SEYS +KIK +DR
Sbjct: 61  YCSNYYSESSERMEVCDWCQTEERSATRHGSSSKKSVGGLEAGVTSRSEYSGDKIKQHDR 120

Query: 180 EDINVEKGKNTSGAPSPRQASRRYKSLKDVMC 85
           E+   EKGKN SGAPSPR  +RRYK LKDVMC
Sbjct: 121 EESG-EKGKNPSGAPSPRPTTRRYKLLKDVMC 151


>ref|XP_002326823.1| predicted protein [Populus trichocarpa] gi|118487002|gb|ABK95332.1|
           unknown [Populus trichocarpa]
           gi|222835138|gb|EEE73573.1| predicted protein [Populus
           trichocarpa]
          Length = 131

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 50/98 (51%), Positives = 62/98 (63%), Gaps = 10/98 (10%)
 Frame = -2

Query: 348 YCSNFYDESSSTAGFCDWCLSKERNGKHVSSKKSIGKE-----VGARSSEYSHE-KIKHN 187
           YCSN+Y E S     CDWC S+ERN +H +S K  G E     +  + SEYS + KIK +
Sbjct: 34  YCSNYYGEFSEPIEQCDWCQSEERNARHGNSSKKSGAEHDSGTLVTKRSEYSGDHKIKQH 93

Query: 186 DREDINV----EKGKNTSGAPSPRQASRRYKSLKDVMC 85
           DRE+ +     +KGKN SG PSPR  +RRYK LKDVMC
Sbjct: 94  DREENSTTSSDQKGKNPSGIPSPRPTTRRYKLLKDVMC 131


>ref|XP_002302513.1| predicted protein [Populus trichocarpa] gi|222844239|gb|EEE81786.1|
           predicted protein [Populus trichocarpa]
          Length = 131

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 49/98 (50%), Positives = 62/98 (63%), Gaps = 10/98 (10%)
 Frame = -2

Query: 348 YCSNFYDESSSTAGFCDWCLSKERNGKHVSSKKSIGKE-----VGARSSEYSHE-KIKHN 187
           YCSN+Y E S     CDWC S+ERN +H +S K  G       V  + SEY+ + KIK +
Sbjct: 34  YCSNYYSEFSEPIELCDWCQSEERNARHGNSSKKSGAGHDGGIVVTKRSEYTGDHKIKQH 93

Query: 186 DREDINV----EKGKNTSGAPSPRQASRRYKSLKDVMC 85
           DRE+ +     +KGKN SG PSPR ++RRYK LKDVMC
Sbjct: 94  DREENSTTSSDQKGKNPSGIPSPRPSTRRYKLLKDVMC 131


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