BLASTX nr result

ID: Coptis23_contig00030862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030862
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD28689.1| putative TNP1-like transposon protein [Arabidopsi...   124   6e-27
gb|AAD25641.1| En/Spm-like transposon protein [Arabidopsis thali...   118   6e-25
gb|AAG60150.1|AC074360_15 En/Spm-like transposon protein, putati...   117   7e-25
gb|AAD28051.1| En/Spm-like transposon protein [Arabidopsis thali...   117   1e-24
gb|AAG52024.1|AC022456_5 Tam1 transposon protein TNP2, putative;...   115   4e-24

>gb|AAD28689.1| putative TNP1-like transposon protein [Arabidopsis thaliana]
          Length = 984

 Score =  124 bits (312), Expect = 6e-27
 Identities = 60/98 (61%), Positives = 74/98 (75%)
 Frame = +3

Query: 3   AMSYSSFIVKSQRYHKKSAEKSNQNSGVSLESTTMCRSSSKDRNQVMNNVSYYGVIKDII 182
           A +YS +IV  QR+H ++ +K  QNSGV  E+T +CRSS+KD +QV++ VSYYG I DII
Sbjct: 120 ARTYSGYIVNGQRFHTRTVDKKTQNSGVYYEATAICRSSAKDTSQVVDLVSYYGCITDII 179

Query: 183 LLDYIGFQVPLFYCDWANVGNGVKVEDGFTLVNLHQGQ 296
           LLDY  F VPLF C+WA  GNGVK EDGFTLVNL+  Q
Sbjct: 180 LLDYNVFYVPLFRCNWAVKGNGVKQEDGFTLVNLNHSQ 217


>gb|AAD25641.1| En/Spm-like transposon protein [Arabidopsis thaliana]
          Length = 531

 Score =  118 bits (295), Expect = 6e-25
 Identities = 55/98 (56%), Positives = 71/98 (72%)
 Frame = +3

Query: 3   AMSYSSFIVKSQRYHKKSAEKSNQNSGVSLESTTMCRSSSKDRNQVMNNVSYYGVIKDII 182
           A SY+ +IV   R+H  S ++  QN G+  E+TTMC +SSKD   +++ VSYYG + DII
Sbjct: 20  ARSYTGYIVNGNRFHTVSIDRQTQNCGMLHEATTMCIASSKDNTPMVDVVSYYGRVVDII 79

Query: 183 LLDYIGFQVPLFYCDWANVGNGVKVEDGFTLVNLHQGQ 296
           LLDY  F +P+F C WAN+GNGVK EDGFTLVNL+Q Q
Sbjct: 80  LLDYNVFYIPIFRCQWANIGNGVKEEDGFTLVNLNQSQ 117


>gb|AAG60150.1|AC074360_15 En/Spm-like transposon protein, putative [Arabidopsis thaliana]
          Length = 1431

 Score =  117 bits (294), Expect = 7e-25
 Identities = 56/91 (61%), Positives = 70/91 (76%)
 Frame = +3

Query: 3   AMSYSSFIVKSQRYHKKSAEKSNQNSGVSLESTTMCRSSSKDRNQVMNNVSYYGVIKDII 182
           A SY+ +IV  QR+H +S E+ +QNSGV  E+TT+CRSS+KD +QV++ VSYY  + DII
Sbjct: 689 ARSYTGYIVNGQRFHTRSLERESQNSGVYYEATTICRSSAKDTSQVVDLVSYYRTVTDII 748

Query: 183 LLDYIGFQVPLFYCDWANVGNGVKVEDGFTL 275
           LLDY  F VP+F C WA  GNGVKVEDGFTL
Sbjct: 749 LLDYNVFYVPIFRCQWAVRGNGVKVEDGFTL 779


>gb|AAD28051.1| En/Spm-like transposon protein [Arabidopsis thaliana]
          Length = 476

 Score =  117 bits (292), Expect = 1e-24
 Identities = 58/98 (59%), Positives = 70/98 (71%)
 Frame = +3

Query: 3   AMSYSSFIVKSQRYHKKSAEKSNQNSGVSLESTTMCRSSSKDRNQVMNNVSYYGVIKDII 182
           A +YS +IV  QR+H  + +K  QNSGV  E+T +CRSS KD +QV++ VSYYG I DII
Sbjct: 17  ARTYSCYIVNGQRFHTITVDKKTQNSGVYYEATAICRSSGKDTSQVVDLVSYYGCITDII 76

Query: 183 LLDYIGFQVPLFYCDWANVGNGVKVEDGFTLVNLHQGQ 296
           LLDY  F  PLF C+WA  GN VK EDGFTLVNL+  Q
Sbjct: 77  LLDYNVFYFPLFRCNWAVKGNEVKQEDGFTLVNLNHSQ 114


>gb|AAG52024.1|AC022456_5 Tam1 transposon protein TNP2, putative; 12762-16371 [Arabidopsis
            thaliana]
          Length = 887

 Score =  115 bits (288), Expect = 4e-24
 Identities = 55/96 (57%), Positives = 70/96 (72%)
 Frame = +3

Query: 3    AMSYSSFIVKSQRYHKKSAEKSNQNSGVSLESTTMCRSSSKDRNQVMNNVSYYGVIKDII 182
            A S++ +IV   R+H  S ++ +QNSG+  EST MCRSS+KD +QV++ VSYYG + DII
Sbjct: 789  ARSFTGYIVNGHRFHTSSLQRQSQNSGIYYESTAMCRSSAKDNSQVVDLVSYYGRVIDII 848

Query: 183  LLDYIGFQVPLFYCDWANVGNGVKVEDGFTLVNLHQ 290
            LLDY  F VP+F C WA  GN VKVEDGFTL  +HQ
Sbjct: 849  LLDYNVFYVPIFRCQWAVRGNRVKVEDGFTLKMMHQ 884


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