BLASTX nr result

ID: Coptis23_contig00030858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030858
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22921.3| unnamed protein product [Vitis vinifera]               64   1e-08
ref|XP_002271698.1| PREDICTED: protein FAR1-RELATED SEQUENCE 11 ...    62   6e-08
ref|XP_003534827.1| PREDICTED: protein FAR1-RELATED SEQUENCE 11-...    60   2e-07
ref|XP_003547368.1| PREDICTED: protein FAR1-RELATED SEQUENCE 11-...    59   3e-07
ref|XP_002519184.1| conserved hypothetical protein [Ricinus comm...    59   3e-07

>emb|CBI22921.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/38 (81%), Positives = 35/38 (92%)
 Frame = +2

Query: 167 ERMSEGTSLVAETSENGTELSADDSGTVEEMPEDTILS 280
           +RMSEGTSLV E+SENGT+LS DD GTVEE+PEDTILS
Sbjct: 36  QRMSEGTSLVMESSENGTDLSQDDIGTVEEIPEDTILS 73


>ref|XP_002271698.1| PREDICTED: protein FAR1-RELATED SEQUENCE 11 [Vitis vinifera]
          Length = 709

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/36 (83%), Positives = 33/36 (91%)
 Frame = +2

Query: 173 MSEGTSLVAETSENGTELSADDSGTVEEMPEDTILS 280
           MSEGTSLV E+SENGT+LS DD GTVEE+PEDTILS
Sbjct: 1   MSEGTSLVMESSENGTDLSQDDIGTVEEIPEDTILS 36


>ref|XP_003534827.1| PREDICTED: protein FAR1-RELATED SEQUENCE 11-like [Glycine max]
          Length = 758

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/36 (77%), Positives = 33/36 (91%)
 Frame = +2

Query: 173 MSEGTSLVAETSENGTELSADDSGTVEEMPEDTILS 280
           MSEGTSLV E+SENGT+LS DD GT+EE+PE+TILS
Sbjct: 1   MSEGTSLVLESSENGTDLSQDDIGTIEEIPEETILS 36


>ref|XP_003547368.1| PREDICTED: protein FAR1-RELATED SEQUENCE 11-like [Glycine max]
          Length = 853

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/41 (68%), Positives = 35/41 (85%)
 Frame = +2

Query: 158 LSTERMSEGTSLVAETSENGTELSADDSGTVEEMPEDTILS 280
           ++  RMSEGTSLV E+SENGT+LS DD GT+EE+ E+TILS
Sbjct: 91  ITDNRMSEGTSLVLESSENGTDLSQDDIGTIEEIAEETILS 131


>ref|XP_002519184.1| conserved hypothetical protein [Ricinus communis]
           gi|223541499|gb|EEF43048.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 749

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/36 (75%), Positives = 33/36 (91%)
 Frame = +2

Query: 173 MSEGTSLVAETSENGTELSADDSGTVEEMPEDTILS 280
           MSEGTS+V E+SENGT++S DD+G VEE+PEDTILS
Sbjct: 1   MSEGTSMVMESSENGTDISQDDTGNVEEIPEDTILS 36


Top