BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030846
         (841 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305017.1| predicted protein [Populus trichocarpa] gi|2...   188   1e-45
ref|XP_002329763.1| predicted protein [Populus trichocarpa] gi|2...   187   3e-45
ref|XP_002519032.1| double-stranded RNA binding protein, putativ...   177   3e-42
emb|CAN72816.1| hypothetical protein VITISV_004100 [Vitis vinifera]   167   3e-39
ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal doma...   166   8e-39

>ref|XP_002305017.1| predicted protein [Populus trichocarpa] gi|222847981|gb|EEE85528.1|
            predicted protein [Populus trichocarpa]
          Length = 967

 Score =  188 bits (478), Expect = 1e-45
 Identities = 102/223 (45%), Positives = 140/223 (62%), Gaps = 8/223 (3%)
 Frame = -2

Query: 840  EFKPALVYSTTLQFSVEVWFAGEKIGEGNGRTKNEAQHQAGECSIRALANKYLSPD---- 673
            EF+PAL+ ++ LQFS+E WF GEK+GEG G+T+ EAQ QA E SI+ LA K    D    
Sbjct: 737  EFRPALIATSDLQFSIETWFVGEKVGEGTGKTRREAQRQAAEGSIKKLAGKISYHDISYY 796

Query: 672  --SQKSESDAVGQSPSFGPHSIAQDDPVPLSISSEPCRFVDPRLEGSKKSEDSVSALKQL 499
                 +++  +G   SFG   + +D+ +  S +SEP R +D RLEGSKKS  SV+ALK+ 
Sbjct: 797  SYPSANDNGFLGDMNSFGNQPLLKDENITYSATSEPSRLLDQRLEGSKKSMGSVTALKEF 856

Query: 498  CFKEGLALMIKGQPTLSSNTTXXXXXXXXXXXEGKVLGKGTGSTWEGAKKQAAEEALDNL 319
            C  EGL +    Q  LS+N+            +G+VLGKG G TW+ AK QAAE+AL +L
Sbjct: 857  CMTEGLGVNFLAQTPLSTNSIPGEEVHAQVEIDGQVLGKGIGLTWDEAKMQAAEKALGSL 916

Query: 318  KSMFG--TQRRPSSPKMLQTLPTKLLSPESSKVFQWVPSSARY 196
            ++MFG  T +R  SP+++Q +P K L  E  +V Q +PSSARY
Sbjct: 917  RTMFGQYTPKRQGSPRLMQGMPNKRLKQEFPRVLQRMPSSARY 959


>ref|XP_002329763.1| predicted protein [Populus trichocarpa] gi|222870825|gb|EEF07956.1|
           predicted protein [Populus trichocarpa]
          Length = 224

 Score =  187 bits (474), Expect = 3e-45
 Identities = 109/220 (49%), Positives = 138/220 (62%), Gaps = 5/220 (2%)
 Frame = -2

Query: 840 EFKPALVYSTTLQFSVEVWFAGEKIGEGNGRTKNEAQHQAGECSIRALANKYL---SPDS 670
           EF+PALV S  LQFS+E WFAGEK+GEG G+T+ EAQ QA E SI+ LA  Y+    PDS
Sbjct: 8   EFRPALVASIDLQFSIEAWFAGEKVGEGTGKTRREAQRQAAEGSIKKLAGIYMLRAKPDS 67

Query: 669 QKSESDAVGQSPSFGPHSIAQDDPVPLSISSEPCRFVDPRLEGSKKSEDSVSALKQLCFK 490
                D+     S  P +IA       S +SEP R +DPRLEGSKKS  SV+ALK+ C  
Sbjct: 68  GPMHGDS-----SRYPSAIAY------SAASEPSRLLDPRLEGSKKSSGSVTALKEFCTM 116

Query: 489 EGLALMIKGQPTLSSNTTXXXXXXXXXXXEGKVLGKGTGSTWEGAKKQAAEEALDNLKSM 310
           EGL +    Q  LS+N+            +G+VLGKG GSTW+ AK QAAE+AL +L++M
Sbjct: 117 EGLVVNFLAQTPLSANSIPGEEVHAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRTM 176

Query: 309 FG--TQRRPSSPKMLQTLPTKLLSPESSKVFQWVPSSARY 196
           FG  TQ+R  SP+ +Q +P K L  E  +V Q +P SARY
Sbjct: 177 FGQYTQKRQGSPRPMQGMPNKRLKQEFPRVLQRMPPSARY 216


>ref|XP_002519032.1| double-stranded RNA binding protein, putative [Ricinus communis]
            gi|223541695|gb|EEF43243.1| double-stranded RNA binding
            protein, putative [Ricinus communis]
          Length = 978

 Score =  177 bits (448), Expect = 3e-42
 Identities = 106/231 (45%), Positives = 138/231 (59%), Gaps = 16/231 (6%)
 Frame = -2

Query: 840  EFKPALVYSTTLQFSVEVWFAGEKIGEGNGRTKNEAQHQAGECSIRALANKYLS---PDS 670
            EFK +LV S  LQFSVE WFAGE++GEG GRT+ EAQ  A E SI+ LAN Y+S   PD+
Sbjct: 740  EFKHSLVNSRDLQFSVEAWFAGERVGEGFGRTRREAQSVAAEASIKNLANIYISRAKPDN 799

Query: 669  QKSESDA-----------VGQSPSFGPHSIAQDDPVPLSISSEPCRFVDPRLEGSKKSED 523
                 DA           +G   SFG   + +D+ +  S SSE    +DPRLE SKKS  
Sbjct: 800  GALHGDASKYSSANDNGFLGHVNSFGSQPLPKDEILSYSDSSEQSGLLDPRLESSKKSMS 859

Query: 522  SVSALKQLCFKEGLALMIKGQPTLSSNTTXXXXXXXXXXXEGKVLGKGTGSTWEGAKKQA 343
            SV+ALK+ C  EGL +    Q  LSSN+            +G+V+GKG GST++ AK QA
Sbjct: 860  SVNALKEFCMMEGLGVNFLAQTPLSSNSVQNAEVHAQVEIDGQVMGKGIGSTFDEAKMQA 919

Query: 342  AEEALDNLKSMFG--TQRRPSSPKMLQTLPTKLLSPESSKVFQWVPSSARY 196
            AE+AL +L++ FG    +R  SP+ +  +P K L PE  +V Q +PSSARY
Sbjct: 920  AEKALGSLRTTFGRFPPKRQGSPRPVPGMPNKHLKPEFPRVLQRMPSSARY 970


>emb|CAN72816.1| hypothetical protein VITISV_004100 [Vitis vinifera]
          Length = 894

 Score =  167 bits (423), Expect = 3e-39
 Identities = 97/205 (47%), Positives = 129/205 (62%), Gaps = 6/205 (2%)
 Frame = -2

Query: 792  EVWFAGEKIGEGNGRTKNEAQHQAGECSIRALANKYLSPDSQK----SESDAVGQSPSFG 625
            EVW  GEKIGEG G+T+ EAQ QA E S+  L+ +YL  D  +    S+++ +  + SFG
Sbjct: 683  EVWNQGEKIGEGTGKTRREAQCQAAEASLMYLSYRYLHGDVNRFPNASDNNFMSDTNSFG 742

Query: 624  PHSIAQDDPVPLSISSEPCRFVDPRLEGSKKSEDSVSALKQLCFKEGLALMIKGQPTLSS 445
              S  ++  +  S +SE  R +DPRLE SKKS  S+SALK+LC  EGL +    QP LSS
Sbjct: 743  YQSFPKEGSMSFSTASESSRLLDPRLESSKKSMGSISALKELCMMEGLGVEFLSQPPLSS 802

Query: 444  NTTXXXXXXXXXXXEGKVLGKGTGSTWEGAKKQAAEEALDNLKSMFG--TQRRPSSPKML 271
            N+T           +G+VLGKGTGSTW+ AK QAAE+AL +LKSM G  +Q+R  SP+ L
Sbjct: 803  NSTQKEEICAQVEIDGQVLGKGTGSTWDDAKMQAAEKALGSLKSMLGQFSQKRQGSPRSL 862

Query: 270  QTLPTKLLSPESSKVFQWVPSSARY 196
            Q +  +L S E ++  Q  PSS RY
Sbjct: 863  QGMGKRLKS-EFTRGLQRTPSSGRY 886


>ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            1-like [Glycine max]
          Length = 958

 Score =  166 bits (419), Expect = 8e-39
 Identities = 99/231 (42%), Positives = 136/231 (58%), Gaps = 16/231 (6%)
 Frame = -2

Query: 840  EFKPALVYSTTLQFSVEVWFAGEKIGEGNGRTKNEAQHQAGECSIRALANKYLS---PDS 670
            EF  +LV ST LQFS+E WFAG+K+GEG GRT+ EAQ++A ECSI+ LA+ Y+S    DS
Sbjct: 720  EFLSSLVASTALQFSIEAWFAGKKVGEGFGRTRREAQNKAAECSIKQLADIYMSHAKDDS 779

Query: 669  QKSESDAVG----------QSPSFGPHSIAQDDPVPLSISSEPCRFVDPRLEGSKKSEDS 520
              +  D  G           S +   + +   + V  S SS+  R  DPRLE SK+S DS
Sbjct: 780  GSTYGDVSGFHGSNNNGFVSSGNSLGNQLLPKESVSFSTSSDSSRVSDPRLEVSKRSTDS 839

Query: 519  VSALKQLCFKEGLALMIKGQPT-LSSNTTXXXXXXXXXXXEGKVLGKGTGSTWEGAKKQA 343
            +SALK+ C  EGLA   +  P   S++             +G++ GKG G TWE AK QA
Sbjct: 840  ISALKEFCMMEGLAANFQSSPAPASTHFAQKDEVHAQVEIDGQIFGKGFGLTWEEAKMQA 899

Query: 342  AEEALDNLKSMF--GTQRRPSSPKMLQTLPTKLLSPESSKVFQWVPSSARY 196
            A++AL++L++MF  GT++R  SP+ +Q L  K L  E  +  Q +P SARY
Sbjct: 900  AKKALESLRTMFNQGTRKRHGSPRSMQGLANKRLKQEYPRTLQRIPYSARY 950