BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030845
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520384.1| PREDICTED: uncharacterized protein LOC100795...   217   1e-54
gb|ABA94321.1| retrotransposon protein, putative, unclassified [...   209   3e-52
emb|CAE03644.2| OSJNBa0060N03.9 [Oryza sativa Japonica Group]         209   3e-52
gb|AAL68641.1|AF458765_1 polyprotein [Oryza sativa Japonica Group]    206   2e-51
gb|ABI34329.1| Integrase core domain containing protein [Solanum...   206   3e-51

>ref|XP_003520384.1| PREDICTED: uncharacterized protein LOC100795634 [Glycine max]
          Length = 1815

 Score =  217 bits (552), Expect = 1e-54
 Identities = 100/199 (50%), Positives = 128/199 (64%)
 Frame = -3

Query: 604  WIYLLKSRTEVLPTFINFMKMIQTQFGVIVKCVRSDNAKEYVSSDFKQHFLTMGVLQQLT 425
            W+YL+K R+E+LP F++F   I+ QFG  +K  RSDNAKEY S D      + G++ Q T
Sbjct: 673  WVYLMKDRSELLPIFVSFYNEIENQFGKTIKIFRSDNAKEYFSHDLSSFLSSKGIIHQST 732

Query: 424  CPYSPEQNGVAERKNRHLMNVVRCLNRGMNVPKRFWSMAVITAAFLINRTPSRILGGQVP 245
            CP++P+QNG+AERKNRHL+   R L    NVP   W  AV+TA FLINR PS  L  Q+P
Sbjct: 733  CPHTPQQNGIAERKNRHLLETARSLMLNSNVPTHHWGDAVLTACFLINRMPSSSLENQIP 792

Query: 244  MHLVKPGYPLFSLAPRVFGCMCFVQDRCPQRAKLDDKSIKCLFLGYSSQSKGYRCYDPLS 65
              +V P  PLF ++P+VFGC CFV D  P   KL  +S+KC+FLGYS   KGY+CY P  
Sbjct: 793  HSIVFPHDPLFHVSPKVFGCTCFVHDLSPGLDKLSARSVKCVFLGYSRLQKGYKCYSPTM 852

Query: 64   HRVIHSRDAIFFESVPSYA 8
             R   S D  FFE  P ++
Sbjct: 853  RRYYMSADVTFFEDTPFFS 871


>gb|ABA94321.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1133

 Score =  209 bits (532), Expect = 3e-52
 Identities = 101/198 (51%), Positives = 135/198 (68%)
 Frame = -3

Query: 604 WIYLLKSRTEVLPTFINFMKMIQTQFGVIVKCVRSDNAKEYVSSDFKQHFLTMGVLQQLT 425
           WIY+LK ++EVL  F +F K++ TQF   VK +R+DN  EY++++F  +    G++ Q T
Sbjct: 331 WIYMLKHKSEVLRCFQDFHKLVTTQFDAKVKIIRTDNGTEYINNEFVSYVSDEGIIHQTT 390

Query: 424 CPYSPEQNGVAERKNRHLMNVVRCLNRGMNVPKRFWSMAVITAAFLINRTPSRILGGQVP 245
           CP +P QNGVAERKNRHL+ V R L   MNVPK  WS AV+TAA+LINR PSRILG + P
Sbjct: 391 CPGTPPQNGVAERKNRHLLEVARSLMFQMNVPKYLWSEAVMTAAYLINRMPSRILGMKSP 450

Query: 244 MHLVKPGYPLFSLAPRVFGCMCFVQDRCPQRAKLDDKSIKCLFLGYSSQSKGYRCYDPLS 65
             L+  G   F + P+VFGC+CFV+D  P   KLD  ++KC+F+GY+S  KGY+C+DP+ 
Sbjct: 451 AELLL-GKREFKVPPKVFGCVCFVRDHRPSVGKLDPHAVKCVFVGYASSQKGYKCWDPIE 509

Query: 64  HRVIHSRDAIFFESVPSY 11
            R+  S D  F E  P Y
Sbjct: 510 RRLFVSMDVTFREFEPYY 527


>emb|CAE03644.2| OSJNBa0060N03.9 [Oryza sativa Japonica Group]
          Length = 1045

 Score =  209 bits (532), Expect = 3e-52
 Identities = 101/198 (51%), Positives = 135/198 (68%)
 Frame = -3

Query: 604  WIYLLKSRTEVLPTFINFMKMIQTQFGVIVKCVRSDNAKEYVSSDFKQHFLTMGVLQQLT 425
            WIY+LK ++EVL  F +F K++ TQF   VK +R+DN  EY++++F  +    G++ Q T
Sbjct: 500  WIYMLKHKSEVLRCFQDFHKLVTTQFDAKVKIIRTDNGTEYINNEFVSYVSDEGIIHQTT 559

Query: 424  CPYSPEQNGVAERKNRHLMNVVRCLNRGMNVPKRFWSMAVITAAFLINRTPSRILGGQVP 245
            CP +P QNGVAERKNRHL+ V R L   MNVPK  WS AV+TAA+LINR PSRILG + P
Sbjct: 560  CPGTPPQNGVAERKNRHLLEVARSLMFQMNVPKYLWSEAVMTAAYLINRMPSRILGMKSP 619

Query: 244  MHLVKPGYPLFSLAPRVFGCMCFVQDRCPQRAKLDDKSIKCLFLGYSSQSKGYRCYDPLS 65
              L+  G   F + P+VFGC+CFV+D  P   KLD  ++KC+F+GY+S  KGY+C+DP+ 
Sbjct: 620  AELLL-GKREFKVPPKVFGCVCFVRDHRPSVGKLDPHAVKCVFVGYASSQKGYKCWDPIE 678

Query: 64   HRVIHSRDAIFFESVPSY 11
             R+  S D  F E  P Y
Sbjct: 679  RRLFVSMDVTFREFEPYY 696


>gb|AAL68641.1|AF458765_1 polyprotein [Oryza sativa Japonica Group]
          Length = 1472

 Score =  206 bits (525), Expect = 2e-51
 Identities = 103/199 (51%), Positives = 135/199 (67%), Gaps = 1/199 (0%)
 Frame = -3

Query: 604  WIYLLKSRTEVLPTFINFMKMIQTQFGVIVKCVRSDNAKEYVSSDFKQHFLTM-GVLQQL 428
            W+YL++ + EVL  F NF   I+  F   V+ +R+DN  EY++S+F  HFL++ G+L Q 
Sbjct: 591  WLYLMRHKDEVLKCFQNFYAYIKNHFNARVQFIRTDNGGEYMNSEFG-HFLSLEGILHQT 649

Query: 427  TCPYSPEQNGVAERKNRHLMNVVRCLNRGMNVPKRFWSMAVITAAFLINRTPSRILGGQV 248
            +CP +P QNGVAERKNRHL+ + R L   MNVPK  WS AV+TAA+LINRTPSRILG + 
Sbjct: 650  SCPDTPPQNGVAERKNRHLLEIARSLMYTMNVPKFLWSEAVMTAAYLINRTPSRILGMKT 709

Query: 247  PMHLVKPGYPLFSLAPRVFGCMCFVQDRCPQRAKLDDKSIKCLFLGYSSQSKGYRCYDPL 68
            P  ++  G   F + PRVFGC CFV+D  P   KLD +++KC+F+GYSS  KGY+C+ P 
Sbjct: 710  PYEMIF-GKNEFVVPPRVFGCTCFVRDHRPSIGKLDPRAVKCIFIGYSSSQKGYKCWSPS 768

Query: 67   SHRVIHSRDAIFFESVPSY 11
              R   S D  F ESVP Y
Sbjct: 769  ERRTFVSMDVTFRESVPFY 787


>gb|ABI34329.1| Integrase core domain containing protein [Solanum demissum]
          Length = 1775

 Score =  206 bits (524), Expect = 3e-51
 Identities = 98/198 (49%), Positives = 129/198 (65%)
 Frame = -3

Query: 604  WIYLLKSRTEVLPTFINFMKMIQTQFGVIVKCVRSDNAKEYVSSDFKQHFLTMGVLQQLT 425
            W++L+K R+E+   F +F   IQ QFGV ++  RSDNA EY+SS F++     G++ Q T
Sbjct: 574  WVFLMKDRSELFSIFKSFFAEIQNQFGVSIRTFRSDNALEYLSSQFREFMTHQGIIHQTT 633

Query: 424  CPYSPEQNGVAERKNRHLMNVVRCLNRGMNVPKRFWSMAVITAAFLINRTPSRILGGQVP 245
            CPY+P+QNGVAERKNRHL+   R L    NVP RFW  AV+T+ +LINR PS  +  QVP
Sbjct: 634  CPYTPQQNGVAERKNRHLIETARTLLLESNVPLRFWGDAVLTSCYLINRMPSSSIQNQVP 693

Query: 244  MHLVKPGYPLFSLAPRVFGCMCFVQDRCPQRAKLDDKSIKCLFLGYSSQSKGYRCYDPLS 65
              ++ P   L+ + PRVFG  CFV +  P + KL  +++KC+FLGYS   KGYRCY    
Sbjct: 694  HSILFPQSHLYPIPPRVFGSTCFVHNLAPGKDKLAPRALKCVFLGYSRVQKGYRCYSHDL 753

Query: 64   HRVIHSRDAIFFESVPSY 11
            HR + S D  FFES P Y
Sbjct: 754  HRYLMSADVTFFESQPYY 771