BLASTX nr result

ID: Coptis23_contig00030844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030844
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264894.2| PREDICTED: NAC domain-containing protein 68-...    72   6e-11
ref|XP_003547591.1| PREDICTED: NAC domain-containing protein 68 ...    68   7e-10
ref|XP_003531559.1| PREDICTED: NAC domain-containing protein 68-...    68   7e-10
emb|CBZ39287.1| NAC transcription factor [Hordeum vulgare subsp....    62   4e-08
ref|NP_001047122.1| Os02g0555300 [Oryza sativa Japonica Group] g...    62   6e-08

>ref|XP_002264894.2| PREDICTED: NAC domain-containing protein 68-like [Vitis vinifera]
           gi|296088532|emb|CBI37523.3| unnamed protein product
           [Vitis vinifera]
          Length = 198

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 38/84 (45%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
 Frame = +2

Query: 2   IKTNWMMHEYXXXXXXXXXXXXXXXXXXXXXXX--WVLCQVFERNDGSQGSFCDNDQ--- 166
           I+TNW+M EY                         WVLC+V+ER     G +CD D    
Sbjct: 115 IETNWIMQEYSLSNSGLGCTSYKRIAGKKILDGVEWVLCRVYERKSSQHGFWCDEDDDDG 174

Query: 167 -ELSCLDEVFLSLDDDLDEINYPN 235
            ELSCLDE+FLSLDDDLDEI+ PN
Sbjct: 175 TELSCLDEIFLSLDDDLDEISLPN 198


>ref|XP_003547591.1| PREDICTED: NAC domain-containing protein 68 [Glycine max]
          Length = 191

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 38/79 (48%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
 Frame = +2

Query: 2   IKTNWMMHEYXXXXXXXXXXXXXXXXXXXXXXX-WVLCQVFERNDGSQGSFCDNDQELSC 178
           IKTNW+M EY                        WV+C+V+ERN        DN  ELSC
Sbjct: 117 IKTNWIMQEYRLSDSSSSTRSSKRKSQPKIEYNKWVICRVYERNGDD-----DNGTELSC 171

Query: 179 LDEVFLSLDDDLDEINYPN 235
           LDEVFLSLDDDLDEI+ PN
Sbjct: 172 LDEVFLSLDDDLDEISLPN 190


>ref|XP_003531559.1| PREDICTED: NAC domain-containing protein 68-like [Glycine max]
          Length = 190

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 38/79 (48%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
 Frame = +2

Query: 2   IKTNWMMHEYXXXXXXXXXXXXXXXXXXXXXXX-WVLCQVFERNDGSQGSFCDNDQELSC 178
           IKTNW+M EY                        WV+C+V+ERN        DN  ELSC
Sbjct: 117 IKTNWIMQEYRLSDSASSTRSSKRKPQPKIEYNKWVICRVYERNGDD-----DNGTELSC 171

Query: 179 LDEVFLSLDDDLDEINYPN 235
           LDEVFLSLDDDLDEI+ PN
Sbjct: 172 LDEVFLSLDDDLDEISLPN 190


>emb|CBZ39287.1| NAC transcription factor [Hordeum vulgare subsp. vulgare]
          Length = 199

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 37/85 (43%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
 Frame = +2

Query: 5   KTNWMMHEYXXXXXXXXXXXXXXXXXXXXXXX---------WVLCQVFERNDGSQGSFCD 157
           KTNW+MHEY                                WV+C+VFE N  SQ SF  
Sbjct: 114 KTNWVMHEYHLLDENGGTSTSGSSRKRSHKKKGHPDKECSNWVVCRVFESNYDSQVSFHQ 173

Query: 158 NDQELSCLDEVFLSLDDDLDEINYP 232
            D ELSCLDEVFLSL DD DE++ P
Sbjct: 174 EDMELSCLDEVFLSL-DDYDEVSLP 197


>ref|NP_001047122.1| Os02g0555300 [Oryza sativa Japonica Group]
           gi|50725782|dbj|BAD33313.1| putative NAC domain protein
           NAC2 [Oryza sativa Japonica Group]
           gi|113536653|dbj|BAF09036.1| Os02g0555300 [Oryza sativa
           Japonica Group] gi|218190967|gb|EEC73394.1| hypothetical
           protein OsI_07643 [Oryza sativa Indica Group]
           gi|222623053|gb|EEE57185.1| hypothetical protein
           OsJ_07126 [Oryza sativa Japonica Group]
          Length = 204

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 38/92 (41%), Positives = 44/92 (47%), Gaps = 14/92 (15%)
 Frame = +2

Query: 2   IKTNWMMHEYXXXXXXXXXXXXXXXXXXXXXXX--------------WVLCQVFERNDGS 139
           I+TNW+MHEY                                     WVLC+VFE + GS
Sbjct: 113 IRTNWIMHEYHLLDGDCVAGGSSNLTSSSSNRRSHRKRGHSSMESNNWVLCRVFESSCGS 172

Query: 140 QGSFCDNDQELSCLDEVFLSLDDDLDEINYPN 235
           Q SF     ELSCLDEVFLSL DD DE++ PN
Sbjct: 173 QVSFHGEGTELSCLDEVFLSL-DDYDEVSLPN 203


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