BLASTX nr result

ID: Coptis23_contig00030835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030835
         (957 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270640.2| PREDICTED: DELLA protein GAI1-like [Vitis vi...   105   1e-20
emb|CAN81356.1| hypothetical protein VITISV_039159 [Vitis vinifera]   105   1e-20
emb|CBI36955.3| unnamed protein product [Vitis vinifera]              102   2e-19
emb|CBI22895.3| unnamed protein product [Vitis vinifera]              100   4e-19
gb|AFH54531.1| GRAS family protein, partial [Dimocarpus longan]        97   6e-18

>ref|XP_002270640.2| PREDICTED: DELLA protein GAI1-like [Vitis vinifera]
          Length = 616

 Score =  105 bits (263), Expect = 1e-20
 Identities = 71/209 (33%), Positives = 109/209 (52%), Gaps = 17/209 (8%)
 Frame = -3

Query: 577 QNGYDSLQGDMREGLNKRKQAYSSVVEGCGVTDHITYKHGFNQH----------KAREET 428
           Q GY +L+G  ++   K KQ +   +E     + +  ++G  Q           KA+++ 
Sbjct: 29  QGGYGTLEGYEKDNSGKGKQDHLFGIEDWEEFESLCSQYGLFQESIPDKRAHFSKAQQQQ 88

Query: 427 IQISRYHEEIFSDFEMFDETVYSQSSQESPKLESI-------LHEISDIAEHKKEQQISL 269
            Q  R +     + +    +   Q  QES KLE         LHE       +K    SL
Sbjct: 89  QQSPRSNHWALDELQFDTVSTPIQPIQESKKLEDFQAGIKEPLHE----PNREKPYPFSL 144

Query: 268 ASLKLLSNYRSELRRSNEDKLNEQRTTSTTADGRRLSTEEILRVAGSRYIQLFVEKDDDL 89
           +SL+LL+NY   +++   + L+   +    A+ +RLSTEE++RVAG+RY++   ++ DD 
Sbjct: 145 SSLELLNNYGGGVKKLKRENLSNI-SNEINAERQRLSTEEVMRVAGARYVEFSSQRGDDF 203

Query: 88  SMLGHPFGCALFGLSDEEIKDVELVHFLL 2
           ++  HPFG AL GLS EE KDVELVHFLL
Sbjct: 204 TLHMHPFGFALMGLSQEETKDVELVHFLL 232


>emb|CAN81356.1| hypothetical protein VITISV_039159 [Vitis vinifera]
          Length = 404

 Score =  105 bits (263), Expect = 1e-20
 Identities = 68/171 (39%), Positives = 97/171 (56%), Gaps = 18/171 (10%)
 Frame = -3

Query: 460 GFNQHKAREETIQISRYHEE-------IFSDFEMFDETVYSQSSQESPKLESILHE---- 314
           GF+Q  A +E   +S+Y ++        F D+E  D+  +   SQ     +  +      
Sbjct: 62  GFDQENADDEGFLLSKYQQQEDEQQKQSFLDYEFLDDLHFDVVSQPIQLCQDYMINPSRT 121

Query: 313 ---ISDIAEHKKEQ--QISLASLKLLSNYRSELRRSNEDKLNEQR--TTSTTADGRRLST 155
              I ++ E KK++    S  SL+LL NYRS +R  NE+KLNE +  T S+ A  RRLST
Sbjct: 122 PTGIPNLVEPKKKKGCPFSSTSLELLKNYRSGIRLLNEEKLNEPKHDTASSEAAWRRLST 181

Query: 154 EEILRVAGSRYIQLFVEKDDDLSMLGHPFGCALFGLSDEEIKDVELVHFLL 2
           EE++RVAG R++Q F +  D +SML HPFG +  GLS+EE +DV L   LL
Sbjct: 182 EEVMRVAGERFMQSF-QNSDGISMLSHPFGLSFSGLSEEESRDVRLAEVLL 231


>emb|CBI36955.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  102 bits (253), Expect = 2e-19
 Identities = 69/199 (34%), Positives = 110/199 (55%), Gaps = 7/199 (3%)
 Frame = -3

Query: 577 QNGYDSLQGDMREGLNKRKQAYSSVVEGCGVTDHITYKHGFNQHKAREETIQISRYHEEI 398
           Q GY +L+G  ++   K KQ +       G+ D   ++   +Q+   +E+I   R H   
Sbjct: 17  QGGYGTLEGYEKDNSGKGKQDHLF-----GIEDWEEFESLCSQYGLFQESIPDKRAH--- 68

Query: 397 FSDFEMFDETVYSQSSQESPK-----LESILHEISDIAEHKKEQQ--ISLASLKLLSNYR 239
           FS  +        Q  Q+SP+     L+ +  +   + E  +E+    SL+SL+LL+NY 
Sbjct: 69  FSKAQ--------QQQQQSPRSNHWALDELQFDTEPLHEPNREKPYPFSLSSLELLNNYG 120

Query: 238 SELRRSNEDKLNEQRTTSTTADGRRLSTEEILRVAGSRYIQLFVEKDDDLSMLGHPFGCA 59
             +++   + L+   +    A+ +RLSTEE++RVAG+RY++   ++ DD ++  HPFG A
Sbjct: 121 GGVKKLKRENLSNI-SNEINAERQRLSTEEVMRVAGARYVEFSSQRGDDFTLHMHPFGFA 179

Query: 58  LFGLSDEEIKDVELVHFLL 2
           L GLS EE KDVELVHFLL
Sbjct: 180 LMGLSQEETKDVELVHFLL 198


>emb|CBI22895.3| unnamed protein product [Vitis vinifera]
          Length = 478

 Score =  100 bits (250), Expect = 4e-19
 Identities = 63/155 (40%), Positives = 90/155 (58%), Gaps = 2/155 (1%)
 Frame = -3

Query: 460 GFNQHKAREETIQISRYHEEIFSDFEMFDETVYSQSSQESPKLESILHEISDIAEHKKEQ 281
           GF+Q  A +E   +S+Y ++        ++    QS  +   L+ +  ++      KK  
Sbjct: 55  GFDQENADDEGFLLSKYQQQ--------EDEQQKQSFLDYEFLDDLHFDVK-----KKGC 101

Query: 280 QISLASLKLLSNYRSELRRSNEDKLNEQR--TTSTTADGRRLSTEEILRVAGSRYIQLFV 107
             S  SL+LL NYRS +R  NE+KLNE +  T S+ A  RRLSTEE++RVAG R++Q F 
Sbjct: 102 PFSSTSLELLKNYRSGIRLLNEEKLNEPKHDTASSEAAWRRLSTEEVMRVAGERFMQSF- 160

Query: 106 EKDDDLSMLGHPFGCALFGLSDEEIKDVELVHFLL 2
           +  D +SML HPFG +  GLS+EE +DV L   LL
Sbjct: 161 QSSDGISMLSHPFGLSFSGLSEEESRDVRLAEVLL 195


>gb|AFH54531.1| GRAS family protein, partial [Dimocarpus longan]
          Length = 503

 Score = 97.1 bits (240), Expect = 6e-18
 Identities = 56/123 (45%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
 Frame = -3

Query: 361 SQSSQESPKLESILHEISDIAEHKKE--QQISLASLKLLSNYRSELRRSNEDKLNEQRTT 188
           +QS  E PKL+ I     ++ +  +E    I+L+SL+LLSNY +  ++    + N     
Sbjct: 13  AQSFHEIPKLKDIQSSSQELVKPAEETPSPIALSSLELLSNYANGFKKLKRKQSNHPTND 72

Query: 187 STTADGR-RLSTEEILRVAGSRYIQLFVEKDDDLSMLGHPFGCALFGLSDEEIKDVELVH 11
            T    R +LSTEEI+RVAG+RYI    +  DD SM+ HPFG AL GLS+EE +DVELVH
Sbjct: 73  DTNEGCRQKLSTEEIMRVAGARYIHFSAQSFDDFSMVTHPFGYALSGLSEEETRDVELVH 132

Query: 10  FLL 2
            LL
Sbjct: 133 LLL 135


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