BLASTX nr result

ID: Coptis23_contig00030823 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030823
         (1102 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001240971.1| uncharacterized protein LOC100820362 [Glycin...   386   e-105
ref|XP_003526588.1| PREDICTED: LOW QUALITY PROTEIN: ser/Thr-rich...   385   e-105
ref|XP_002306979.1| predicted protein [Populus trichocarpa] gi|2...   385   e-104
ref|XP_003631559.1| PREDICTED: ser/Thr-rich protein T10 in DGCR ...   384   e-104
ref|XP_003544784.1| PREDICTED: ser/Thr-rich protein T10 in DGCR ...   380   e-103

>ref|NP_001240971.1| uncharacterized protein LOC100820362 [Glycine max]
           gi|255635670|gb|ACU18184.1| unknown [Glycine max]
          Length = 273

 Score =  386 bits (991), Expect = e-105
 Identities = 176/261 (67%), Positives = 218/261 (83%)
 Frame = -1

Query: 985 MCIAVFVWQAHPLYPFLLLLNRDEYHNRPTKPVSWWEGCEILGGRDEVAGGTWLACTREG 806
           MCIA+F+WQ HPLYPFLLL NRDEYHNRPTKPVSWWE C+IL GRDE+A GTWLAC+ +G
Sbjct: 1   MCIALFLWQCHPLYPFLLLNNRDEYHNRPTKPVSWWEDCDILAGRDEIAMGTWLACSTQG 60

Query: 805 KFAFVTNVLESRTLPEARSRGDLPVRFLESKKSPKEFAEEVMKEADQYNGFNLILADISA 626
           + AF+TNVLE  TLPEA+SRGDLPV FL+S K PKEFAE +  EA  YNGFNLI+ADI +
Sbjct: 61  RVAFLTNVLELHTLPEAKSRGDLPVLFLKSSKKPKEFAESLKSEAHYYNGFNLIVADIVS 120

Query: 625 KTMIYISNRPKGELISIKEVSPGIHVLTNAKLDSPWHKALRLHRNFNELFGIYGEDEIPL 446
            +M+YISNRPKG+ I+I+EV PG+HVL+N KLDSPWHKALRL  +F E    +GE EIP+
Sbjct: 121 NSMVYISNRPKGQPITIQEVPPGLHVLSNDKLDSPWHKALRLEFSFKEHVAKHGEGEIPV 180

Query: 445 NELVEELMKDTVKADRNRLPNICSPDWEIHLSSIFVQVDTPLGCYGTRSTIAISVKASGE 266
            E++++LMKDTVKAD+N LP ICS DWE +LSSIFV+V+TPLG YGTRS+ A++V++SGE
Sbjct: 181 KEVIQKLMKDTVKADKNSLPRICSLDWEFNLSSIFVEVETPLGLYGTRSSAALTVRSSGE 240

Query: 265 VSFYEKYIENESWKEHTVTYQ 203
            SFYE Y+++  WKEH + ++
Sbjct: 241 ASFYEVYLDDTKWKEHVIDFR 261


>ref|XP_003526588.1| PREDICTED: LOW QUALITY PROTEIN: ser/Thr-rich protein T10 in DGCR
           region-like [Glycine max]
          Length = 275

 Score =  385 bits (990), Expect = e-105
 Identities = 174/260 (66%), Positives = 217/260 (83%)
 Frame = -1

Query: 985 MCIAVFVWQAHPLYPFLLLLNRDEYHNRPTKPVSWWEGCEILGGRDEVAGGTWLACTREG 806
           MCIA+F+WQ HPLYPFLLL NRDEYHNRPTKPVSWWE C+IL GRDE+A GTWLAC+ +G
Sbjct: 1   MCIALFLWQCHPLYPFLLLNNRDEYHNRPTKPVSWWEDCDILAGRDEIAMGTWLACSTQG 60

Query: 805 KFAFVTNVLESRTLPEARSRGDLPVRFLESKKSPKEFAEEVMKEADQYNGFNLILADISA 626
           + AF+TNVLE  TLPEA+SRGDLPV FL+S K PKEFAE +  EA  YNGFN+++ADI +
Sbjct: 61  RVAFLTNVLELHTLPEAKSRGDLPVLFLKSSKKPKEFAESLKLEAHYYNGFNIVVADIVS 120

Query: 625 KTMIYISNRPKGELISIKEVSPGIHVLTNAKLDSPWHKALRLHRNFNELFGIYGEDEIPL 446
           K+M+YISNRPKG+ I+IKEV PG+HVL+N KLDSPWHKALRL  +F E    YGE EIP+
Sbjct: 121 KSMVYISNRPKGQPITIKEVPPGLHVLSNDKLDSPWHKALRLEFSFKEHVAKYGEGEIPV 180

Query: 445 NELVEELMKDTVKADRNRLPNICSPDWEIHLSSIFVQVDTPLGCYGTRSTIAISVKASGE 266
            E++++LMKD VKAD++ LP ICSPDWE +LSSIFV+V+TPLG YGTRS+ A++V++ GE
Sbjct: 181 KEVIQKLMKDKVKADKSSLPRICSPDWEFNLSSIFVEVETPLGLYGTRSSAALTVRSRGE 240

Query: 265 VSFYEKYIENESWKEHTVTY 206
            +FYE Y+++  WKEH + +
Sbjct: 241 ANFYEVYLDDTKWKEHAIDF 260


>ref|XP_002306979.1| predicted protein [Populus trichocarpa] gi|222856428|gb|EEE93975.1|
           predicted protein [Populus trichocarpa]
          Length = 262

 Score =  385 bits (989), Expect = e-104
 Identities = 180/261 (68%), Positives = 217/261 (83%)
 Frame = -1

Query: 985 MCIAVFVWQAHPLYPFLLLLNRDEYHNRPTKPVSWWEGCEILGGRDEVAGGTWLACTREG 806
           MCIA F+WQAHPLYP LLL NRDE    PT+PV+WW+G EILGGRD VAGGTWLAC+R G
Sbjct: 1   MCIAAFIWQAHPLYPLLLLQNRDE----PTEPVAWWDGSEILGGRDAVAGGTWLACSRTG 56

Query: 805 KFAFVTNVLESRTLPEARSRGDLPVRFLESKKSPKEFAEEVMKEADQYNGFNLILADISA 626
           + AF+TNVLE    PEA+SRG+LPV FLES KSPKEFAE ++K+A QYNGFNLILADIS+
Sbjct: 57  RVAFITNVLELHPFPEAKSRGELPVLFLESTKSPKEFAEGLVKDAHQYNGFNLILADISS 116

Query: 625 KTMIYISNRPKGELISIKEVSPGIHVLTNAKLDSPWHKALRLHRNFNELFGIYGEDEIPL 446
           K+M+Y+SNRP+GE + I+EVSPG+HVL+NAKLDSPWHK  RL  N  +L G YGE EIP+
Sbjct: 117 KSMVYLSNRPEGEPVVIQEVSPGLHVLSNAKLDSPWHKVQRLGLNLKDLLGKYGESEIPV 176

Query: 445 NELVEELMKDTVKADRNRLPNICSPDWEIHLSSIFVQVDTPLGCYGTRSTIAISVKASGE 266
            E++E+LM+D VKAD++RLP ICS DWE +LSSIFV++DTPLGCYGTRST A+++ A GE
Sbjct: 177 KEVLEKLMRDKVKADKSRLPGICSIDWEFNLSSIFVEIDTPLGCYGTRSTAALTIGAGGE 236

Query: 265 VSFYEKYIENESWKEHTVTYQ 203
           VSFYE Y+E   WKE TV Y+
Sbjct: 237 VSFYEIYLEKNVWKESTVNYR 257


>ref|XP_003631559.1| PREDICTED: ser/Thr-rich protein T10 in DGCR region-like [Vitis
           vinifera] gi|297744476|emb|CBI37738.3| unnamed protein
           product [Vitis vinifera]
          Length = 272

 Score =  384 bits (985), Expect = e-104
 Identities = 182/261 (69%), Positives = 219/261 (83%)
 Frame = -1

Query: 985 MCIAVFVWQAHPLYPFLLLLNRDEYHNRPTKPVSWWEGCEILGGRDEVAGGTWLACTREG 806
           MCIAVF+WQAHP+YPFLLLLNRDEYHNRPT+ ++WW+G EILGGRD +AGGTWLAC+R+G
Sbjct: 1   MCIAVFLWQAHPIYPFLLLLNRDEYHNRPTEALAWWQGGEILGGRDGLAGGTWLACSRDG 60

Query: 805 KFAFVTNVLESRTLPEARSRGDLPVRFLESKKSPKEFAEEVMKEADQYNGFNLILADISA 626
           + AF+TNV E   +PEA+SRGDL VRFLESKK+P EFAEEVMKEAD+YNGFNLI+AD+ +
Sbjct: 61  RLAFLTNVREVHPIPEAKSRGDLIVRFLESKKNPMEFAEEVMKEADKYNGFNLIIADLCS 120

Query: 625 KTMIYISNRPKGELISIKEVSPGIHVLTNAKLDSPWHKALRLHRNFNELFGIYGEDEIPL 446
           KTMIYI+NRP+   +S+ EVSPGIHVL+NA LDSPW KA RL  NF EL   YGE EIP 
Sbjct: 121 KTMIYITNRPREANVSVVEVSPGIHVLSNASLDSPWPKARRLGHNFKELLDKYGEGEIPT 180

Query: 445 NELVEELMKDTVKADRNRLPNICSPDWEIHLSSIFVQVDTPLGCYGTRSTIAISVKASGE 266
            E+VE+LMK+T+K D   LP I  P+ E  LSSIFV  DTPLG YGTRST ++ V+ASGE
Sbjct: 181 EEMVEKLMKNTIKDDEIVLPRIYPPEREHQLSSIFVDTDTPLGRYGTRSTSSVCVRASGE 240

Query: 265 VSFYEKYIENESWKEHTVTYQ 203
           V+FYEK++ENE+W+E+TVTYQ
Sbjct: 241 VNFYEKHLENETWRENTVTYQ 261


>ref|XP_003544784.1| PREDICTED: ser/Thr-rich protein T10 in DGCR region-like [Glycine
           max]
          Length = 270

 Score =  380 bits (975), Expect = e-103
 Identities = 178/260 (68%), Positives = 213/260 (81%)
 Frame = -1

Query: 985 MCIAVFVWQAHPLYPFLLLLNRDEYHNRPTKPVSWWEGCEILGGRDEVAGGTWLACTREG 806
           MCIA+F+WQAHPLYPFLLL NRDEYHNRPTKPVSWWE  +I+GGRDE+AGGTWLAC+REG
Sbjct: 1   MCIALFLWQAHPLYPFLLLNNRDEYHNRPTKPVSWWEDIDIVGGRDEIAGGTWLACSREG 60

Query: 805 KFAFVTNVLESRTLPEARSRGDLPVRFLESKKSPKEFAEEVMKEADQYNGFNLILADISA 626
           + AF+TNVLE R+LPEA+SRGDLPV FL+S K PKEFAE +  EA  YNGFNLI+ADI +
Sbjct: 61  RVAFLTNVLELRSLPEAKSRGDLPVSFLKSGKHPKEFAESLKMEAHYYNGFNLIVADIPS 120

Query: 625 KTMIYISNRPKGELISIKEVSPGIHVLTNAKLDSPWHKALRLHRNFNELFGIYGEDEIPL 446
           K M+YISN PKG+ I+IKEVSPG+HVL+NAKLDS WHKA RL   F E    YGE EIP+
Sbjct: 121 KCMVYISNSPKGQPITIKEVSPGLHVLSNAKLDSKWHKAQRLEVGFKEQLAKYGEGEIPV 180

Query: 445 NELVEELMKDTVKADRNRLPNICSPDWEIHLSSIFVQVDTPLGCYGTRSTIAISVKASGE 266
            E+V +LMKD  KAD + LP+ICS DWE +LSSIFV+V+TPLG YGTRS+ A+ V +S E
Sbjct: 181 KEVVHKLMKDKTKADNSHLPHICSLDWEFNLSSIFVEVETPLGLYGTRSSAALIVTSSEE 240

Query: 265 VSFYEKYIENESWKEHTVTY 206
           VSF+E Y++   WKEH + +
Sbjct: 241 VSFFEAYLDEGMWKEHLIDF 260


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